Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb187800 Zea mays HOM05D007064 ORTHO05D008772 2.7e-247 858.2 430 100.0
Os02g0694800 Oryza sativa ssp. japonica HOM05D007064 ORTHO05D008772 2.6e-202 708.8 411 84.9
TAR629G0708 Trochodendron aralioides HOM05D007064 ORTHO05D008772 1.4e-147 526.9 389 67.4
Nn1g00178 Nelumbo nucifera HOM05D007064 ORTHO05D008772 1.3e-145 520.4 393 64.9
GSVIVG01024376001 Vitis vinifera HOM05D007064 ORTHO05D008772 1.3e-145 520.4 382 67.5
CSS0020222 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 3.9e-145 518.8 394 65.5
CSS0020425 Camellia sinensis var. sinensis HOM05D007064 ORTHO05D008772 5.0e-145 518.5 394 65.2
PSO063G1297 Papaver somniferum HOM05D007064 ORTHO05D008772 1.9e-144 516.5 390 65.1
Rhsim03G0222700 Rhododendron simsii HOM05D007064 ORTHO05D008772 1.4e-142 510.4 408 62.7
CiPaw.05G216200 Carya illinoinensis HOM05D007064 ORTHO05D008772 1.8e-142 510.0 389 65.3
QL09p023233 Quercus lobata HOM05D007064 ORTHO05D008772 3.1e-142 509.2 388 65.5
PSO782G0881 Papaver somniferum HOM05D007064 ORTHO05D008772 6.8e-142 508.1 390 64.6
Nitab4.5_0004530g0030 Nicotiana tabacum HOM05D007064 ORTHO05D008772 7.5e-141 504.6 392 63.5
Hund09801 Selenicereus undatus HOM05D007064 ORTHO05D000105 1.3e-140 503.8 382 64.1
Ciclev10020357m.g Citrus clementina HOM05D007064 ORTHO05D008772 1.7e-140 503.4 389 64.0
Actinidia34318 Actinidia chinensis HOM05D007064 ORTHO05D008772 2.9e-140 502.7 429 60.1
Aqoxy3G02225 Aquilegia oxysepala HOM05D007064 ORTHO05D008772 6.4e-140 501.5 383 65.0
MD13G1202900 Malus domestica HOM05D007064 ORTHO05D008772 1.4e-139 500.4 395 63.5
Nitab4.5_0000021g0660 Nicotiana tabacum HOM05D007064 ORTHO05D008772 1.4e-139 500.4 392 63.5
COL.COLO4_15235 Corchorus olitorius HOM05D007064 ORTHO05D008772 5.4e-139 498.4 393 62.8
Gohir.A11G303500 Gossypium hirsutum HOM05D007064 ORTHO05D008772 5.4e-139 498.4 413 60.0
ATR0829G191 Amborella trichopoda HOM05D007064 ORTHO05D008772 7.0e-139 498.0 390 61.8
Haze_00398 Corylus avellana HOM05D007064 ORTHO05D008772 9.2e-139 497.7 395 63.8
PGSC0003DMG400003147 Solanum tuberosum HOM05D007064 ORTHO05D008772 1.2e-138 497.3 393 63.6
Gorai.007G348800 Gossypium raimondii HOM05D007064 ORTHO05D008772 2.0e-138 496.5 388 62.6
Migut.F00087 Erythranthe guttata HOM05D007064 ORTHO05D008772 6.0e-138 495.0 396 63.1
Ah.04g156400 Amaranthus hybridus HOM05D007064 ORTHO05D008772 1.3e-137 493.8 383 62.9
Duzib106G1646 Durio zibethinus HOM05D007064 ORTHO05D008772 1.7e-137 493.4 440 58.9
Solyc03g097130.3 Solanum lycopersicum HOM05D007064 ORTHO05D008772 3.0e-137 492.7 379 64.4
TWI60G0820 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 3.0e-137 492.7 417 59.2
Thecc.05G215700 Theobroma cacao HOM05D007064 ORTHO05D008772 1.1e-136 490.7 422 59.2
Cc02_g00210 Coffea canephora HOM05D007064 ORTHO05D008772 5.6e-136 488.4 406 61.8
RcHm_v2.0_Chr4g0388921 Rosa chinensis HOM05D007064 ORTHO05D008772 5.6e-136 488.4 408 60.3
Sc19g0000100 Simmondsia chinensis HOM05D007064 ORTHO05D008772 9.5e-136 487.6 422 59.7
ECA238G0775 Erigeron canadensis HOM05D007064 ORTHO05D008772 2.1e-135 486.5 394 61.7
Atru.chr12.1880 Acer truncatum HOM05D007064 ORTHO05D008772 4.7e-135 485.3 417 60.0
CAN.G1131.22 Capsicum annuum HOM05D007064 ORTHO05D008772 6.2e-135 485.0 390 62.8
FvH4_4g01950 Fragaria vesca HOM05D007064 ORTHO05D008772 6.2e-135 485.0 381 62.5
CANSAT78G1989 Cannabis sativa HOM05D007064 ORTHO05D008772 2.3e-134 483.0 397 61.7
FAN12G0288 Fragaria x ananassa HOM05D007064 ORTHO05D008772 2.3e-134 483.0 408 59.8
Cfa016048 Carpinus fangiana HOM05D007064 ORTHO05D008772 4.0e-134 482.3 395 62.5
CsaV3_3G050060 Cucumis sativus L. HOM05D007064 ORTHO05D008772 6.8e-134 481.5 390 61.3
Sabra19G0062000 Salix brachista HOM05D007064 ORTHO05D008772 1.2e-133 480.7 383 62.7
SGA_v2.0_scaffold44G16901 Striga asiatica HOM05D007064 ORTHO05D008772 1.5e-133 480.3 392 62.2
AUR62028195 Chenopodium quinoa HOM05D007064 ORTHO05D008772 2.0e-133 479.9 380 61.8
arahy.Tifrunner.gnm1.ann1.EDBW82 Arachis hypogaea HOM05D007064 ORTHO05D008772 3.4e-133 479.2 391 60.9
arahy.Tifrunner.gnm1.ann1.P291P9 Arachis hypogaea HOM05D007064 ORTHO05D008772 5.8e-133 478.4 391 60.9
EL10Ac3g05060 Beta vulgaris HOM05D007064 ORTHO05D008772 7.5e-133 478.0 385 61.0
HanXRQChr14g0451581 Helianthus annuus HOM05D007064 ORTHO05D008772 1.2e-130 470.7 418 56.9
VMungo1215G2591 Vigna mungo HOM05D007064 ORTHO05D008772 1.7e-129 466.8 376 61.4
Glyma.11G009700 Glycine max HOM05D007064 ORTHO05D008772 3.0e-129 466.1 376 60.9
AT5G16810 Arabidopsis thaliana HOM05D007064 ORTHO05D008772 5.1e-129 465.3 394 60.4
LjContig00222g0020502 Lotus japonicus HOM05D007064 ORTHO05D008772 1.5e-128 463.8 403 58.3
AL6G27830 Arabidopsis lyrata HOM05D007064 ORTHO05D008772 2.5e-128 463.0 394 60.7
Thhalv10013656m.g Eutrema salsugineum HOM05D007064 ORTHO05D008772 3.3e-128 462.6 394 60.2
Gohir.D11G318800 Gossypium hirsutum HOM05D007064 ORTHO05D008772 3.3e-128 462.6 336 65.8
Phvul.002G040600 Phaseolus vulgaris HOM05D007064 ORTHO05D008772 3.3e-128 462.6 376 60.6
Lsat_1_v5_gn_2_95061 Lactuca sativa HOM05D007064 ORTHO05D008772 4.3e-128 462.2 419 56.6
Sp6g27320 Schrenkiella parvula HOM05D007064 ORTHO05D008772 5.6e-128 461.8 394 59.9
HPP92_025673 Vanilla planifolia HOM05D007064 ORTHO05D008772 7.3e-128 461.5 382 63.6
THA.LOC104820893 Tarenaya hassleriana HOM05D007064 ORTHO05D008772 2.8e-127 459.5 426 57.5
BolC2t06775H Brassica oleracea HOM05D007064 ORTHO05D008772 6.8e-126 454.9 389 59.4
BcaC03g18516 Brassica carinata HOM05D007064 ORTHO05D008772 8.9e-126 454.5 389 59.4
C02p08600 Brassica napus HOM05D007064 ORTHO05D008772 8.9e-126 454.5 389 59.4
Lalb_Chr09g0320151 Lupinus albus HOM05D007064 ORTHO05D008772 2.0e-125 453.4 385 59.5
TWI60G1094 Tripterygium wilfordii HOM05D007064 ORTHO05D008772 4.4e-125 452.2 394 58.1
AUR62002078 Chenopodium quinoa HOM05D007064 ORTHO05D008772 1.3e-124 450.7 383 59.3
SalBow4G1574 Salvia bowleyana HOM05D007064 ORTHO05D008772 1.1e-123 447.6 396 58.6
Medtr5g006230 Medicago truncatula HOM05D007064 ORTHO05D008772 7.1e-123 444.9 377 60.2
SEGI_11081 Sequoiadendron giganteum HOM05D007064 ORTHO05D008772 1.2e-122 444.1 394 57.9
SalBow4G1678 Salvia bowleyana HOM05D007064 ORTHO05D008772 3.5e-122 442.6 402 58.0
Ca_24438_v3 Cicer arietinum L. HOM05D007064 ORTHO05D008772 1.7e-121 440.3 383 58.2
TPR.G37970 Trifolium pratense HOM05D007064 ORTHO05D008772 3.9e-121 439.1 378 58.7
BcaNung04953 Brassica carinata HOM05D007064 ORTHO05D008772 6.6e-121 438.3 394 58.1
BraA02t05344Z Brassica rapa HOM05D007064 ORTHO05D008772 9.5e-120 434.5 397 57.4
ClCG09G013090 Citrullus lanatus HOM05D007064 ORTHO05D008772 1.1e-118 431.0 367 59.4
CDE11G0292 Ceratophyllum demersum HOM05D007064 ORTHO05D008772 4.4e-117 425.6 382 57.3
A02p03790 Brassica napus HOM05D007064 ORTHO05D008772 1.3e-116 424.1 399 55.6
Aa31LG11G12770 Aethionema arabicum HOM05D007064 ORTHO05D008772 1.4e-115 420.6 420 54.8
Dinv17250 Davidia involucrata HOM05D007064 ORTHO05D008772 1.3e-113 414.1 335 62.1
Lj1A1033T73 Lonicera japonica HOM05D007064 ORTHO05D008772 9.6e-112 407.9 328 61.9
Prupe.1G025200 Prunus persica HOM05D007064 ORTHO05D008772 3.6e-111 406.0 328 61.6
Peaxi162Scf00516g00675 Petunia axillaris HOM05D007064 ORTHO05D008772 4.4e-109 399.1 391 54.7
Hma1.2p1_0649F.1_g195260 Hydrangea macrophylla HOM05D007064 ORTHO05D008772 1.4e-107 394.0 281 68.7
MELO3C003312.2 Cucumis melo HOM05D007064 ORTHO05D008772 3.2e-107 392.9 338 59.5
Sed0013285 Sechium edule HOM05D007064 ORTHO05D008772 2.1e-106 390.2 290 64.5
Sopen03g027870 Solanum pennellii HOM05D007064 ORTHO05D008772 1.0e-105 387.9 278 67.6
Pp3c23_10770 Physcomitrium patens HOM05D007064 ORTHO05D008772 9.6e-104 381.3 463 45.4
vmacro06523 Vaccinium macrocarpon HOM05D007064 ORTHO05D008772 2.0e-101 373.6 418 49.3
Mapoly0096s0061 Marchantia polymorpha HOM05D007064 ORTHO05D008772 2.6e-101 373.2 419 48.7
Potri.019G050500 Populus trichocarpa HOM05D007064 ORTHO05D008772 2.6e-101 373.2 313 60.7
Eucgr.K00080 Eucalyptus grandis HOM05D007064 ORTHO05D008772 1.7e-100 370.5 269 67.7
Manes.09G127400 Manihot esculenta HOM05D007064 ORTHO05D008772 2.7e-98 363.2 332 55.4
Carub.0006s1503 Capsella rubella HOM05D007064 ORTHO05D008772 3.3e-96 356.3 279 63.8
Psat2g189080 Pisum sativum HOM05D007064 ORTHO05D008772 2.5e-91 340.1 328 55.5
Glyma.01G233100 Glycine max HOM05D007064 ORTHO05D008772 2.3e-89 333.6 322 53.7
CARHR196350 Cardamine hirsuta HOM05D007064 ORTHO05D008772 1.1e-80 304.7 293 54.6
Oeu038089.3 Olea europaea HOM05D007064 ORTHO05D008772 2.8e-79 300.1 392 45.7
AagrBONN_evm.TU.Sc2ySwM_344.2887 Anthoceros agrestis HOM05D007064 ORTHO05D008772 5.9e-69 265.8 323 46.1
SMO343G0012 Selaginella moellendorffii HOM05D007064 ORTHO05D008772 6.3e-55 219.2 385 39.7
CBR_g8898 Chara braunii HOM05D007064 ORTHO05D008772 8.3e-47 192.2 221 47.5
Psat0s4094g0040 Pisum sativum HOM05D007064 ORTHO05D008772 1.8e-38 164.5 109 69.7
Cpa.g.sc43.97 Carica papaya HOM05D007064 ORTHO05D008772 2.7e-37 160.6 146 56.2
CBR_g8900 Chara braunii HOM05D007064 ORTHO05D000002 7.2e-35 152.5 207 43.5
Cpa.g.sc43.98 Carica papaya HOM05D007064 ORTHO05D008772 4.6e-29 133.3 71 87.3
Oeu043948.1 Olea europaea HOM05D007064 ORTHO05D008772 2.2e-23 114.4 71 77.5
Lj1A1033G66 Lonicera japonica HOM05D007064 ORTHO05D008772 1.1e-19 102.1 54 85.2
TPR.G40530 Trifolium pratense HOM05D007064 ORTHO05D008772 3.6e-18 97.1 54 79.6
HanXRQChr01g0005821 Helianthus annuus HOM05D007064 ORTHO05D008772 1.7e-12 78.2 47 74.5
Mapoly0001s0031 Marchantia polymorpha HOM05D002406 ORTHO05D006947 1.2e-10 72.0 395 23.8
PRCOL_00004348 Prasinoderma coloniale HOM05D007064 ORTHO05D008772 1.6e-10 71.6 304 27.3
Pp3c10_6850 Physcomitrium patens HOM05D002406 ORTHO05D006947 2.3e-09 67.8 393 24.4
CBR_g6359 Chara braunii HOM05D007064 ORTHO05D008772 6.8e-09 66.2 96 39.6
MCO05G602 Micromonas commoda HOM05D007064 ORTHO05D008772 5.8e-08 63.2 191 27.7


User provided reference genes

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