Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 1.9e-95 352.4 169 100.0
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 5.0e-80 301.2 169 85.2
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 7.0e-66 254.2 162 72.8
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 1.2e-65 253.4 162 72.8
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 4.5e-65 251.5 161 73.3
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 4.5e-65 251.5 161 73.3
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 5.9e-65 251.1 168 70.8
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 1.0e-64 250.4 161 72.7
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 1.7e-64 249.6 161 72.7
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 1.7e-64 249.6 161 72.7
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 1.7e-64 249.6 161 71.4
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 2.9e-64 248.8 161 72.0
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 2.9e-64 248.8 162 70.4
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 3.8e-64 248.4 161 72.0
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 3.8e-64 248.4 157 73.9
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 5.0e-64 248.1 157 73.2
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 2.5e-63 245.7 162 71.6
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 4.2e-63 245.0 161 69.6
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 4.2e-63 245.0 157 69.4
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 5.5e-63 244.6 161 72.0
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 7.2e-63 244.2 162 70.4
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 7.2e-63 244.2 162 70.4
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 9.4e-63 243.8 161 70.2
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 9.4e-63 243.8 161 70.8
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 1.2e-62 243.4 161 70.2
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 1.6e-62 243.0 161 70.2
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 2.1e-62 242.7 161 71.4
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 2.1e-62 242.7 161 72.0
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 4.7e-62 241.5 157 70.7
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 4.7e-62 241.5 161 70.2
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 4.7e-62 241.5 153 71.9
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 4.7e-62 241.5 161 69.6
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 6.1e-62 241.1 162 69.1
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 6.1e-62 241.1 157 70.7
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 8.0e-62 240.7 157 69.4
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 8.0e-62 240.7 161 70.2
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 8.0e-62 240.7 161 68.9
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 8.0e-62 240.7 157 70.1
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 1.0e-61 240.4 161 68.9
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.4e-61 240.0 162 69.1
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 1.4e-61 240.0 161 69.6
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 1.8e-61 239.6 160 69.4
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 1.8e-61 239.6 157 70.1
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 2.3e-61 239.2 161 69.6
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 2.3e-61 239.2 157 69.4
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 2.3e-61 239.2 161 68.3
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 2.3e-61 239.2 158 70.9
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 3.0e-61 238.8 161 67.1
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 5.2e-61 238.0 161 69.6
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 5.2e-61 238.0 159 68.6
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 6.7e-61 237.7 157 70.1
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 1.1e-60 236.9 159 67.9
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 1.1e-60 236.9 161 69.6
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 1.1e-60 236.9 161 70.2
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 1.1e-60 236.9 158 70.9
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 5.7e-60 234.6 162 69.1
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 7.4e-60 234.2 157 68.8
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 7.4e-60 234.2 164 65.2
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 7.4e-60 234.2 161 67.1
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 7.4e-60 234.2 162 67.9
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 7.4e-60 234.2 161 67.1
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 7.4e-60 234.2 161 68.3
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 7.4e-60 234.2 161 67.7
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 1.7e-59 233.0 161 67.1
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 1.7e-59 233.0 161 67.1
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 1.7e-59 233.0 161 66.5
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 2.2e-59 232.6 161 65.8
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 2.2e-59 232.6 158 69.0
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 2.2e-59 232.6 157 69.4
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 2.8e-59 232.3 157 68.2
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 4.8e-59 231.5 161 68.3
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 6.3e-59 231.1 160 66.9
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 8.2e-59 230.7 160 66.9
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 1.8e-58 229.6 157 67.5
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 7.0e-58 227.6 160 65.6
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 1.2e-57 226.9 159 68.6
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 4.5e-57 224.9 160 66.2
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 7.7e-57 224.2 157 66.9
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.0e-56 223.8 140 72.1
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 2.2e-56 222.6 161 65.2
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.5e-55 219.9 161 68.9
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 9.4e-55 217.2 166 63.3
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 4.7e-54 214.9 136 71.3
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.4e-53 213.4 165 57.6
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 3.0e-53 212.2 157 60.5
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 2.2e-51 206.1 162 60.5
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 1.8e-50 203.0 259 44.4
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 3.5e-49 198.7 160 56.9
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 9.4e-47 190.7 193 49.2
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 2.6e-44 182.6 126 68.3
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.6e-41 173.3 116 71.6
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 7.2e-39 164.5 109 72.5
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 1.1e-31 140.6 82 78.0
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 1.5e-31 140.2 83 77.1
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 8.0e-30 134.4 86 70.9
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 5.2e-29 131.7 80 73.8
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 5.2e-29 131.7 101 63.4
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.2e-25 120.6 87 62.1
MD17G1223600 Malus domestica HOM05D007259 ORTHO05D009158 6.0e-25 118.2 80 65.0
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 3.0e-24 115.9 86 60.5
MELO3C026739.2 Cucumis melo HOM05D007259 ORTHO05D009158 1.1e-23 114.0 78 65.4
FAN02G2583 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.3e-23 112.5 79 64.6
Lj5C80T7 Lonicera japonica HOM05D007259 ORTHO05D009158 5.2e-21 105.1 81 60.5
Cpa.g.sc10.78 Carica papaya HOM05D007259 ORTHO05D009158 2.0e-20 103.2 78 60.3
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 2.2e-11 73.2 76 52.6


User provided reference genes

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