Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb183740 Zea mays HOM05D044595 ORTHO05D006426 1.4e-128 463.0 247 100.0
Zm00001eb246060 Zea mays HOM05D044595 ORTHO05D006426 5.0e-73 278.5 266 62.4
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 1.9e-19 100.5 173 40.5
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.0e-12 78.2 159 33.3
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 2.2e-12 77.0 165 34.5
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 2.9e-12 76.6 177 32.8
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 6.5e-12 75.5 173 36.4
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 8.4e-12 75.1 176 31.2
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.1e-11 74.7 177 29.9
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 3.2e-11 73.2 164 28.7
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 3.2e-11 73.2 164 28.7
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 4.2e-11 72.8 173 34.1
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 1.2e-10 71.2 177 31.1
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.2e-10 71.2 169 31.4
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 2.1e-10 70.5 177 30.5
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 6.1e-10 68.9 169 32.5
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 7.9e-10 68.6 175 32.0
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 1.0e-09 68.2 167 30.5
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 1.0e-09 68.2 167 31.1
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 6.7e-09 65.5 181 29.8
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 6.7e-09 65.5 175 32.0
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 6.7e-09 65.5 164 26.8
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 6.7e-09 65.5 173 30.6
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 8.7e-09 65.1 169 32.0
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 2.5e-08 63.5 172 26.2
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 3.3e-08 63.2 173 29.5
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 4.3e-08 62.8 171 28.1
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 4.3e-08 62.8 186 26.9
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 4.3e-08 62.8 168 31.5
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 4.3e-08 62.8 177 28.2
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.7e-08 62.4 173 30.1
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 7.4e-08 62.0 172 29.1
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 7.4e-08 62.0 167 25.7
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 9.7e-08 61.6 158 30.4
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 2.2e-07 60.5 173 28.9
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 2.2e-07 60.5 172 27.3
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.2e-07 60.5 160 27.5
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 2.8e-07 60.1 180 28.3
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 2.8e-07 60.1 175 28.6
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.7e-07 59.7 179 27.4
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 4.8e-07 59.3 176 30.1
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 4.8e-07 59.3 171 35.1
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 8.2e-07 58.5 168 33.3
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 8.2e-07 58.5 177 28.8
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 1.1e-06 58.2 169 28.4
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.4e-06 57.8 175 26.9
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.8e-06 57.4 178 29.2
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 2.4e-06 57.0 185 28.6
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 2.4e-06 57.0 178 33.1
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 3.1e-06 56.6 183 29.5
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 4.1e-06 56.2 179 28.5
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 4.1e-06 56.2 179 28.5
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 5.3e-06 55.8 187 27.3
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 5.3e-06 55.8 182 29.1
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 5.3e-06 55.8 179 30.7
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.3e-06 55.8 172 30.8
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 6.9e-06 55.5 170 29.4


User provided reference genes

Program Settings