Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb180340 Zea mays HOM05D000198 ORTHO05D005959 1.8e-53 212.2 100 100.0
Zm00001eb085560 Zea mays HOM05D000198 ORTHO05D005959 2.4e-50 201.8 100 97.0
Zm00001eb337490 Zea mays HOM05D000198 ORTHO05D005959 4.1e-50 201.1 100 96.0
Zm00001eb100180 Zea mays HOM05D000198 ORTHO05D005959 6.0e-41 170.6 86 95.3
Lj5C35T2 Lonicera japonica HOM05D000198 ORTHO05D005959 1.3e-40 169.5 99 79.8
Hma1.2p1_0291F.1_g114920 Hydrangea macrophylla HOM05D000198 ORTHO05D005959 5.1e-40 167.5 86 91.9
MBI13_g35420_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D005959 5.1e-40 167.5 86 91.9
Nn8g38614 Nelumbo nucifera HOM05D000198 ORTHO05D005959 5.1e-40 167.5 86 91.9
Os09g0440300 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D005959 1.1e-39 166.4 86 91.9
Aqoxy7G01026 Aquilegia oxysepala HOM05D000198 ORTHO05D005959 1.5e-39 166.0 86 90.7
PGR119G2520 Punica granatum HOM05D000198 ORTHO05D005959 1.9e-39 165.6 86 90.7
ClCG09G001060 Citrullus lanatus HOM05D000198 ORTHO05D005959 3.3e-39 164.9 86 90.7
MELO3C024345.2 Cucumis melo HOM05D000198 ORTHO05D005959 3.3e-39 164.9 86 90.7
CsaV3_7G034360 Cucumis sativus L. HOM05D000198 ORTHO05D005959 3.3e-39 164.9 86 90.7
SalBow6G2826 Salvia bowleyana HOM05D000198 ORTHO05D005959 4.3e-39 164.5 86 90.7
SalBow6G5793 Salvia bowleyana HOM05D000198 ORTHO05D005959 4.3e-39 164.5 86 90.7
Dinv20419 Davidia involucrata HOM05D000198 ORTHO05D005959 5.6e-39 164.1 86 89.5
Eucgr.F04402 Eucalyptus grandis HOM05D000198 ORTHO05D005959 5.6e-39 164.1 86 89.5
TAR626G0433 Trochodendron aralioides HOM05D000198 ORTHO05D005959 5.6e-39 164.1 86 89.5
vmacro22030 Vaccinium macrocarpon HOM05D000198 ORTHO05D005959 5.6e-39 164.1 86 89.5
PSO104G0161 Papaver somniferum HOM05D000198 ORTHO05D005959 7.3e-39 163.7 86 90.7
PSO421G0556 Papaver somniferum HOM05D000198 ORTHO05D005959 7.3e-39 163.7 86 90.7
ATR0598G121 Amborella trichopoda HOM05D000198 ORTHO05D005959 9.5e-39 163.3 86 87.2
Sed0020538 Sechium edule HOM05D000198 ORTHO05D005959 9.5e-39 163.3 86 89.5
Cfa002976 Carpinus fangiana HOM05D000198 ORTHO05D005959 1.2e-38 162.9 86 87.2
Haze_26026 Corylus avellana HOM05D000198 ORTHO05D005959 1.2e-38 162.9 86 87.2
Manes.04G146300 Manihot esculenta HOM05D000198 ORTHO05D005959 1.2e-38 162.9 86 89.5
Oeu057874.2 Olea europaea HOM05D000198 ORTHO05D005959 1.2e-38 162.9 86 89.5
HPP92_011368 Vanilla planifolia HOM05D000198 ORTHO05D005959 1.2e-38 162.9 86 89.5
EL10Ac7g16425 Beta vulgaris HOM05D000198 ORTHO05D005959 1.6e-38 162.5 91 85.7
CSS0046920 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005959 1.6e-38 162.5 86 89.5
COL.COLO4_30736 Corchorus olitorius HOM05D000198 ORTHO05D005959 1.6e-38 162.5 86 88.4
QL11p001049 Quercus lobata HOM05D000198 ORTHO05D005959 1.6e-38 162.5 86 88.4
unitig_748.g7471 Utricularia gibba HOM05D000198 ORTHO05D005959 1.6e-38 162.5 86 89.5
GSVIVG01015062001 Vitis vinifera HOM05D000198 ORTHO05D005959 1.6e-38 162.5 86 86.0
Duzib235G0296 Durio zibethinus HOM05D000198 ORTHO05D005959 2.8e-38 161.8 86 87.2
Potri.001G167100 Populus trichocarpa HOM05D000198 ORTHO05D005959 2.8e-38 161.8 86 89.5
Potri.003G067700 Populus trichocarpa HOM05D000198 ORTHO05D005959 2.8e-38 161.8 86 88.4
Rhsim12G0210700 Rhododendron simsii HOM05D000198 ORTHO05D005959 2.8e-38 161.8 86 87.2
Rhsim12G0211100 Rhododendron simsii HOM05D000198 ORTHO05D005959 2.8e-38 161.8 86 87.2
TWI14G1137 Tripterygium wilfordii HOM05D000198 ORTHO05D005959 2.8e-38 161.8 86 88.4
CiPaw.03G204900 Carya illinoinensis HOM05D000198 ORTHO05D005959 3.6e-38 161.4 86 87.2
Manes.11G017800 Manihot esculenta HOM05D000198 ORTHO05D005959 3.6e-38 161.4 86 87.2
Manes.11G017900 Manihot esculenta HOM05D000198 ORTHO05D005959 3.6e-38 161.4 86 87.2
Manes.11G018400 Manihot esculenta HOM05D000198 ORTHO05D005959 3.6e-38 161.4 86 87.2
Sabra01G0126300 Salix brachista HOM05D000198 ORTHO05D005959 3.6e-38 161.4 86 88.4
Cpa.g.sc25.134 Carica papaya HOM05D000198 ORTHO05D005959 4.7e-38 161.0 86 87.2
MD02G1094300 Malus domestica HOM05D000198 ORTHO05D005959 6.2e-38 160.6 86 87.2
Sabra03G0039600 Salix brachista HOM05D000198 ORTHO05D005959 6.2e-38 160.6 84 88.1
MSTRG.9524 Avicennia marina HOM05D000198 ORTHO05D005959 8.1e-38 160.2 86 88.4
Duzib192G0568 Durio zibethinus HOM05D000198 ORTHO05D005959 1.4e-37 159.5 86 86.0
Thecc.06G122600 Theobroma cacao HOM05D000198 ORTHO05D005959 1.4e-37 159.5 86 87.2
CDE05G2779 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 1.8e-37 159.1 86 87.2
Cc00_g19070 Coffea canephora HOM05D000198 ORTHO05D005959 1.8e-37 159.1 86 88.4
CDE11G1141 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 2.4e-37 158.7 86 87.2
AUR62001464 Chenopodium quinoa HOM05D000198 ORTHO05D005959 3.1e-37 158.3 86 88.4
AUR62009904 Chenopodium quinoa HOM05D000198 ORTHO05D005959 3.1e-37 158.3 86 88.4
Lalb_Chr11g0074221 Lupinus albus HOM05D000198 ORTHO05D005959 3.1e-37 158.3 86 87.2
Lalb_Chr11g0074241 Lupinus albus HOM05D000198 ORTHO05D005959 3.1e-37 158.3 86 87.2
Prupe.7G196700 Prunus persica HOM05D000198 ORTHO05D005959 3.1e-37 158.3 86 84.9
Sc12g0010670 Simmondsia chinensis HOM05D000198 ORTHO05D005959 3.1e-37 158.3 86 87.2
Migut.I01090 Erythranthe guttata HOM05D000198 ORTHO05D005959 4.0e-37 157.9 86 87.2
RcHm_v2.0_Chr2g0095351 Rosa chinensis HOM05D000198 ORTHO05D005959 5.2e-37 157.5 86 84.9
Ah.08g216940 Amaranthus hybridus HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 87.2
arahy.Tifrunner.gnm1.ann1.159H25 Arachis hypogaea HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 86.0
arahy.Tifrunner.gnm1.ann1.XD58IC Arachis hypogaea HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 86.0
COL.COLO4_18083 Corchorus olitorius HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 84.9
FvH4_1g08890 Fragaria vesca HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 84.9
FAN03G0818 Fragaria x ananassa HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 84.9
FAN19G1784 Fragaria x ananassa HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 84.9
FAN23G1242 Fragaria x ananassa HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 84.9
FAN26G2953 Fragaria x ananassa HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 84.9
FAN28G1454 Fragaria x ananassa HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 84.9
Gohir.D06G149800 Gossypium hirsutum HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 87.2
Medtr2g042330 Medicago truncatula HOM05D000198 ORTHO05D005959 6.8e-37 157.1 86 86.0
Ciclev10025411m.g Citrus clementina HOM05D000198 ORTHO05D005959 8.9e-37 156.8 86 86.0
Gohir.A06G144000 Gossypium hirsutum HOM05D000198 ORTHO05D005959 8.9e-37 156.8 86 87.2
Gorai.010G174800 Gossypium raimondii HOM05D000198 ORTHO05D005959 8.9e-37 156.8 86 87.2
Hund18683 Selenicereus undatus HOM05D000198 ORTHO05D005959 1.2e-36 156.4 87 86.2
HanXRQChr10g0312481 Helianthus annuus HOM05D000198 ORTHO05D005959 2.0e-36 155.6 86 81.4
Atru.chr1.4039 Acer truncatum HOM05D000198 ORTHO05D005959 2.6e-36 155.2 86 84.9
FAN26G1556 Fragaria x ananassa HOM05D000198 ORTHO05D005959 2.6e-36 155.2 85 84.7
Ca_02187_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005959 3.4e-36 154.8 86 84.9
Glyma.09G070300 Glycine max HOM05D000198 ORTHO05D005959 3.4e-36 154.8 86 84.9
Glyma.15G178400 Glycine max HOM05D000198 ORTHO05D005959 3.4e-36 154.8 86 84.9
Phvul.009G226700 Phaseolus vulgaris HOM05D000198 ORTHO05D005959 3.4e-36 154.8 86 84.9
Sopen03g041040 Solanum pennellii HOM05D000198 ORTHO05D005959 3.4e-36 154.8 86 83.7
PGSC0003DMG400022885 Solanum tuberosum HOM05D000198 ORTHO05D005959 3.4e-36 154.8 86 83.7
VMungo1309G2902 Vigna mungo HOM05D000198 ORTHO05D005959 3.4e-36 154.8 86 84.9
ECA234G3205 Erigeron canadensis HOM05D000198 ORTHO05D005959 4.4e-36 154.5 86 81.4
A08p01230 Brassica napus HOM05D000198 ORTHO05D005959 5.8e-36 154.1 86 83.7
CANSAT56G2536 Cannabis sativa HOM05D000198 ORTHO05D005959 5.8e-36 154.1 86 83.7
MD15G1219200 Malus domestica HOM05D000198 ORTHO05D005959 7.6e-36 153.7 87 85.1
SEGI_07673 Sequoiadendron giganteum HOM05D000198 ORTHO05D005959 7.6e-36 153.7 86 84.9
THA.LOC104815620 Tarenaya hassleriana HOM05D000198 ORTHO05D005959 1.3e-35 152.9 86 82.6
BcaB04g17029 Brassica carinata HOM05D000198 ORTHO05D005959 1.7e-35 152.5 86 82.6
BcaC01g01433 Brassica carinata HOM05D000198 ORTHO05D005959 1.7e-35 152.5 86 82.6
C03p91970 Brassica napus HOM05D000198 ORTHO05D005959 1.7e-35 152.5 86 82.6
BolC3t21517H Brassica oleracea HOM05D000198 ORTHO05D005959 1.7e-35 152.5 86 82.6
BraA08t32174Z Brassica rapa HOM05D000198 ORTHO05D005959 1.7e-35 152.5 86 82.6
Psat1g134760 Pisum sativum HOM05D000198 ORTHO05D005959 1.7e-35 152.5 86 83.7
Sp1g40550 Schrenkiella parvula HOM05D000198 ORTHO05D005959 4.9e-35 151.0 86 81.4
Carub.0001s4334 Capsella rubella HOM05D000198 ORTHO05D005959 6.4e-35 150.6 86 81.4
Thhalv10011405m.g Eutrema salsugineum HOM05D000198 ORTHO05D005959 6.4e-35 150.6 86 81.4
HanXRQChr12g0360421 Helianthus annuus HOM05D000198 ORTHO05D005959 6.4e-35 150.6 86 81.4
Solyc03g122310.4 Solanum lycopersicum HOM05D000198 ORTHO05D005959 6.4e-35 150.6 83 84.3
CAN.G862.50 Capsicum annuum HOM05D000198 ORTHO05D005959 8.4e-35 150.2 86 80.2
Lj6g0012993 Lotus japonicus HOM05D000198 ORTHO05D005959 8.4e-35 150.2 86 82.6
Aa31LG8G1290 Aethionema arabicum HOM05D000198 ORTHO05D005959 1.1e-34 149.8 86 81.4
Mapoly0118s0026 Marchantia polymorpha HOM05D000198 ORTHO05D005959 1.4e-34 149.4 86 79.1
AL1G62810 Arabidopsis lyrata HOM05D000198 ORTHO05D005959 1.9e-34 149.1 86 80.2
CARHR044440 Cardamine hirsuta HOM05D000198 ORTHO05D005959 1.9e-34 149.1 86 81.4
Pp3c2_8090 Physcomitrium patens HOM05D000198 ORTHO05D005959 2.4e-34 148.7 85 82.4
Pp3c2_8099 Physcomitrium patens HOM05D000198 ORTHO05D005959 2.4e-34 148.7 85 82.4
AT1G54100 Arabidopsis thaliana HOM05D000198 ORTHO05D005959 4.2e-34 147.9 86 80.2
SMO367G0849 Selaginella moellendorffii HOM05D000198 ORTHO05D005959 4.2e-34 147.9 85 83.5
Zm00001eb422540 Zea mays HOM05D000198 ORTHO05D005959 1.9e-31 139.0 68 95.6
Lsat_1_v5_gn_5_136600 Lactuca sativa HOM05D000198 ORTHO05D005959 2.5e-31 138.7 79 81.0
DCAR_022687 Daucus carota HOM05D000198 ORTHO05D005959 1.3e-30 136.3 74 89.2
Haze_26480 Corylus avellana HOM05D000198 ORTHO05D005959 2.4e-29 132.1 86 73.3
Nitab4.5_0002898g0050 Nicotiana tabacum HOM05D000198 ORTHO05D005959 1.5e-28 129.4 75 80.0
Nitab4.5_0005225g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005959 2.0e-28 129.0 75 80.0
Peaxi162Scf00038g02031 Petunia axillaris HOM05D000198 ORTHO05D005959 2.6e-28 128.6 70 84.3
A06p00550 Brassica napus HOM05D000198 ORTHO05D005959 3.4e-28 128.3 75 80.0
BraA06t23269Z Brassica rapa HOM05D000198 ORTHO05D005959 3.4e-28 128.3 75 80.0
TPR.G23248 Trifolium pratense HOM05D000198 ORTHO05D005959 4.0e-21 104.8 86 61.6
Actinidia24721 Actinidia chinensis HOM05D000198 ORTHO05D005959 4.5e-20 101.3 53 83.0
Migut.O00960 Erythranthe guttata HOM05D000198 ORTHO05D005959 1.2e-17 93.2 47 93.6
Dinv37857 Davidia involucrata HOM05D000198 ORTHO05D005959 4.8e-14 81.3 50 72.0
GSVIVG01016734001 Vitis vinifera HOM05D000198 ORTHO05D005959 1.5e-12 76.3 87 46.0
PGSC0003DMG400034597 Solanum tuberosum HOM05D000198 ORTHO05D005959 3.4e-12 75.1 49 75.5
Aqoxy3G00353 Aquilegia oxysepala HOM05D000198 ORTHO05D005959 6.5e-11 70.9 39 84.6


User provided reference genes

Program Settings