Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb170780 Zea mays HOM05D007724 ORTHO05D009363 2.9e-39 164.9 88 100.0
Zm00001eb077660 Zea mays HOM05D007724 ORTHO05D009363 6.1e-13 77.4 55 74.5
Zm00001eb230450 Zea mays HOM05D007724 ORTHO05D009363 6.7e-12 73.9 46 84.8
Zm00001eb099230 Zea mays HOM05D007724 ORTHO05D009363 8.8e-12 73.6 50 80.0
Zm00001eb282370 Zea mays HOM05D007724 ORTHO05D009363 1.5e-11 72.8 48 79.2
Zm00001eb023750 Zea mays HOM05D007724 ORTHO05D009363 2.0e-11 72.4 43 88.4
Zm00001eb050360 Zea mays HOM05D007724 ORTHO05D009363 2.5e-11 72.0 53 73.6
Zm00001eb091310 Zea mays HOM05D007724 ORTHO05D009363 2.5e-11 72.0 81 54.3
Zm00001eb028320 Zea mays HOM05D007724 ORTHO05D009363 3.3e-11 71.6 51 74.5
Zm00001eb090270 Zea mays HOM05D007724 ORTHO05D009363 3.3e-11 71.6 98 49.0
Zm00001eb378290 Zea mays HOM05D007724 ORTHO05D009363 3.3e-11 71.6 51 74.5
Zm00001eb142470 Zea mays HOM05D007724 ORTHO05D009363 4.3e-11 71.2 67 62.7
Zm00001eb079160 Zea mays HOM05D007724 ORTHO05D009363 5.7e-11 70.9 51 74.5
Zm00001eb163490 Zea mays HOM05D007724 ORTHO05D009363 5.7e-11 70.9 51 72.5
Zm00001eb235670 Zea mays HOM05D007724 ORTHO05D009363 5.7e-11 70.9 51 74.5
Zm00001eb334580 Zea mays HOM05D007724 ORTHO05D009363 5.7e-11 70.9 51 74.5
Zm00001eb143040 Zea mays HOM05D007724 ORTHO05D000361 7.4e-11 70.5 51 74.5
Zm00001eb154770 Zea mays HOM05D007724 ORTHO05D009363 7.4e-11 70.5 55 72.7
Zm00001eb012370 Zea mays HOM05D007724 ORTHO05D009363 1.3e-10 69.7 51 72.5
Zm00001eb197540 Zea mays HOM05D007724 ORTHO05D009363 1.3e-10 69.7 48 77.1
Zm00001eb223110 Zea mays HOM05D007724 ORTHO05D009363 1.3e-10 69.7 74 54.1
Zm00001eb015300 Zea mays HOM05D007724 ORTHO05D009363 1.7e-10 69.3 80 56.2
Zm00001eb024410 Zea mays HOM05D007724 ORTHO05D009363 1.7e-10 69.3 51 70.6
Zm00001eb130100 Zea mays HOM05D007724 ORTHO05D009363 1.7e-10 69.3 67 61.2
Zm00001eb316680 Zea mays HOM05D007724 ORTHO05D009363 1.7e-10 69.3 51 68.6
Zm00001eb416350 Zea mays HOM05D007724 ORTHO05D009363 1.7e-10 69.3 51 70.6
Zm00001eb096700 Zea mays HOM05D007724 ORTHO05D009363 2.2e-10 68.9 48 72.9
Zm00001eb016360 Zea mays HOM05D007724 ORTHO05D009363 2.8e-10 68.6 51 70.6
Zm00001eb088550 Zea mays HOM05D007724 ORTHO05D009363 2.8e-10 68.6 51 72.5
Zm00001eb264560 Zea mays HOM05D007724 ORTHO05D009363 2.8e-10 68.6 51 72.5
Zm00001eb409810 Zea mays HOM05D007724 ORTHO05D009363 2.8e-10 68.6 62 64.5
Zm00001eb187790 Zea mays HOM05D007724 ORTHO05D009363 3.7e-10 68.2 51 70.6
Zm00001eb361060 Zea mays HOM05D007724 ORTHO05D009363 3.7e-10 68.2 77 59.7
Zm00001eb272910 Zea mays HOM05D007724 ORTHO05D009363 4.8e-10 67.8 48 75.0
Zm00001eb214140 Zea mays HOM05D000263 ORTHO05D009363 6.3e-10 67.4 53 71.7
Zm00001eb060180 Zea mays HOM05D007724 ORTHO05D009363 8.2e-10 67.0 51 68.6
Zm00001eb196660 Zea mays HOM05D007724 ORTHO05D009363 8.2e-10 67.0 58 63.8
Zm00001eb198090 Zea mays HOM05D007724 ORTHO05D009363 8.2e-10 67.0 51 66.7
Zm00001eb364990 Zea mays HOM05D001185 ORTHO05D005576 8.2e-10 67.0 47 76.6
Zm00001eb400140 Zea mays HOM05D007724 ORTHO05D009363 8.2e-10 67.0 70 60.0
Zm00001eb400150 Zea mays HOM05D007724 ORTHO05D009363 8.2e-10 67.0 70 60.0
Zm00001eb413060 Zea mays HOM05D007724 ORTHO05D009363 8.2e-10 67.0 45 77.8
Zm00001eb094830 Zea mays HOM05D007724 ORTHO05D009363 1.1e-09 66.6 60 66.7
Zm00001eb153690 Zea mays HOM05D007724 ORTHO05D009363 1.1e-09 66.6 43 83.7
Zm00001eb275800 Zea mays HOM05D007724 ORTHO05D009363 1.1e-09 66.6 51 70.6
Zm00001eb387000 Zea mays HOM05D007724 ORTHO05D009363 1.1e-09 66.6 44 81.8
Zm00001eb005470 Zea mays HOM05D007724 ORTHO05D009363 1.4e-09 66.2 73 58.9
Zm00001eb275840 Zea mays HOM05D007724 ORTHO05D009363 1.4e-09 66.2 51 70.6
Zm00001eb288460 Zea mays HOM05D007724 ORTHO05D009363 1.4e-09 66.2 51 72.5
Zm00001eb140710 Zea mays HOM05D007724 ORTHO05D009363 1.8e-09 65.9 56 66.1
Zm00001eb170010 Zea mays HOM05D007724 ORTHO05D009363 1.8e-09 65.9 43 83.7
Zm00001eb297850 Zea mays HOM05D007724 ORTHO05D009363 1.8e-09 65.9 51 68.6
Zm00001eb112860 Zea mays HOM05D007724 ORTHO05D009363 2.4e-09 65.5 49 67.3
Zm00001eb130010 Zea mays HOM05D007724 ORTHO05D009363 2.4e-09 65.5 48 70.8
Zm00001eb386600 Zea mays HOM05D007724 ORTHO05D009363 2.4e-09 65.5 45 73.3
Zm00001eb225800 Zea mays HOM05D007724 ORTHO05D009363 3.1e-09 65.1 51 68.6
Zm00001eb115070 Zea mays HOM05D007724 ORTHO05D009363 4.1e-09 64.7 51 70.6
Zm00001eb175480 Zea mays HOM05D007724 ORTHO05D009363 4.1e-09 64.7 78 53.8
Zm00001eb235960 Zea mays HOM05D007724 ORTHO05D009363 4.1e-09 64.7 48 72.9
Zm00001eb285830 Zea mays HOM05D000389 ORTHO05D000287 4.1e-09 64.7 44 72.7
Zm00001eb415200 Zea mays HOM05D007724 ORTHO05D009363 4.1e-09 64.7 51 66.7
Zm00001eb048430 Zea mays HOM05D007724 ORTHO05D009363 5.3e-09 64.3 45 75.6
Zm00001eb082520 Zea mays HOM05D007724 ORTHO05D009363 6.9e-09 63.9 45 71.1
Zm00001eb259640 Zea mays HOM05D000034 ORTHO05D000277 6.9e-09 63.9 51 68.6
Zm00001eb340660 Zea mays HOM05D007724 ORTHO05D009363 6.9e-09 63.9 44 79.5
Zm00001eb167500 Zea mays HOM05D000563 ORTHO05D009538 9.1e-09 63.5 44 75.0
Zm00001eb425330 Zea mays HOM05D007724 ORTHO05D009363 9.1e-09 63.5 43 81.4
Zm00001eb364550 Zea mays HOM05D007724 ORTHO05D009363 1.2e-08 63.2 85 50.6
Zm00001eb118310 Zea mays HOM05D007724 ORTHO05D009363 1.5e-08 62.8 44 72.7
Zm00001eb279080 Zea mays HOM05D007724 ORTHO05D009363 1.5e-08 62.8 44 77.3
Zm00001eb040960 Zea mays HOM05D007724 ORTHO05D009363 2.0e-08 62.4 45 68.9
Zm00001eb008960 Zea mays HOM05D007724 ORTHO05D009363 2.6e-08 62.0 49 67.3
Zm00001eb281650 Zea mays HOM05D007724 ORTHO05D445957 3.4e-08 61.6 43 83.7
Zm00001eb006780 Zea mays HOM05D000100 ORTHO05D000052 4.5e-08 61.2 45 77.8
Zm00001eb220350 Zea mays HOM05D007724 ORTHO05D009363 4.5e-08 61.2 51 62.7
Zm00001eb410810 Zea mays HOM05D007724 ORTHO05D009363 4.5e-08 61.2 43 79.1
Zm00001eb036500 Zea mays HOM05D007724 ORTHO05D009363 5.9e-08 60.8 44 75.0
Zm00001eb157750 Zea mays HOM05D007724 ORTHO05D009363 5.9e-08 60.8 45 71.1
Zm00001eb284660 Zea mays HOM05D007724 ORTHO05D009363 5.9e-08 60.8 44 77.3
Zm00001eb136520 Zea mays HOM05D007724 ORTHO05D009363 1.0e-07 60.1 39 76.9
Zm00001eb351160 Zea mays HOM05D027772 ORTHO05D009363 1.3e-07 59.7 43 76.7
QL03p019108 Quercus lobata HOM05D000389 ORTHO05D000287 2.2e-07 58.9 56 55.4
Zm00001eb039580 Zea mays HOM05D007724 ORTHO05D009363 2.2e-07 58.9 36 80.6
Zm00001eb410610 Zea mays HOM05D007724 ORTHO05D009363 2.9e-07 58.5 41 73.2
Zm00001eb336230 Zea mays HOM05D007724 ORTHO05D009363 3.8e-07 58.2 45 68.9
Hma1.2p1_1441F.1_g283650 Hydrangea macrophylla HOM05D000389 ORTHO05D000287 5.0e-07 57.8 57 57.9
Zm00001eb297710 Zea mays HOM05D007724 ORTHO05D009363 6.5e-07 57.4 46 67.4
CSS0006988 Camellia sinensis var. sinensis HOM05D000389 ORTHO05D000287 1.1e-06 56.6 57 54.4
TAR633G1297 Trochodendron aralioides HOM05D000389 ORTHO05D000287 1.4e-06 56.2 56 51.8
Actinidia21505 Actinidia chinensis HOM05D000389 ORTHO05D000287 1.9e-06 55.8 44 63.6
CiPaw.07G025100 Carya illinoinensis HOM05D000389 ORTHO05D000287 1.9e-06 55.8 51 56.9
Manes.03G199700 Manihot esculenta HOM05D000389 ORTHO05D000287 3.2e-06 55.1 48 54.2
Zm00001eb389510 Zea mays HOM05D007724 ORTHO05D009363 3.2e-06 55.1 43 62.8
AUR62005240 Chenopodium quinoa HOM05D000389 ORTHO05D000287 4.2e-06 54.7 52 57.7
ClCG02G015200 Citrullus lanatus HOM05D000389 ORTHO05D000287 4.2e-06 54.7 56 55.4
CSS0000277 Camellia sinensis var. sinensis HOM05D000389 ORTHO05D000287 5.5e-06 54.3 44 61.4
Os05g0358500 Oryza sativa ssp. japonica HOM05D000389 ORTHO05D000287 5.5e-06 54.3 44 61.4
Zm00001eb140770 Zea mays HOM05D007724 ORTHO05D446486 5.5e-06 54.3 48 62.5
arahy.Tifrunner.gnm1.ann1.KMJ8U9 Arachis hypogaea HOM05D000389 ORTHO05D000287 7.2e-06 53.9 56 51.8
Glyma.10G150100 Glycine max HOM05D000389 ORTHO05D000287 7.2e-06 53.9 56 50.0
Glyma.20G238100 Glycine max HOM05D000389 ORTHO05D000287 7.2e-06 53.9 56 50.0
Lalb_Chr04g0260571 Lupinus albus HOM05D000389 ORTHO05D000287 7.2e-06 53.9 44 61.4
Sed0024880 Sechium edule HOM05D000389 ORTHO05D000287 7.2e-06 53.9 56 50.0
GSVIVG01035094001 Vitis vinifera HOM05D000389 ORTHO05D000287 7.2e-06 53.9 54 50.0
Zm00001eb109760 Zea mays HOM05D007724 ORTHO05D009363 7.2e-06 53.9 44 63.6
ATR0706G215 Amborella trichopoda HOM05D000389 ORTHO05D000287 9.4e-06 53.5 51 58.8
CSS0012770 Camellia sinensis var. sinensis HOM05D000389 ORTHO05D000287 9.4e-06 53.5 57 49.1
Dinv24405 Davidia involucrata HOM05D000389 ORTHO05D000287 9.4e-06 53.5 56 53.6
Dinv29712 Davidia involucrata HOM05D005296 ORTHO05D000287 9.4e-06 53.5 56 50.0
Glyma.03G233500 Glycine max HOM05D000389 ORTHO05D000287 9.4e-06 53.5 56 51.8
Glyma.19G230600 Glycine max HOM05D000389 ORTHO05D000287 9.4e-06 53.5 56 51.8
Sed0001426 Sechium edule HOM05D000389 ORTHO05D000287 9.4e-06 53.5 44 61.4
Zm00001eb201790 Zea mays HOM05D007724 ORTHO05D009363 9.4e-06 53.5 40 70.0


User provided reference genes

Program Settings