Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 6.1e-126 454.1 227 100.0
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 4.1e-61 238.8 145 74.5
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 6.9e-61 238.0 145 75.2
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 1.5e-60 236.9 133 78.9
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 5.9e-60 235.0 157 70.7
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.3e-59 233.8 134 77.6
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 3.8e-59 232.3 134 76.1
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.8e-59 232.3 134 76.1
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 3.8e-59 232.3 135 74.8
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.0e-59 231.9 134 76.1
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 5.0e-59 231.9 134 76.1
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 5.0e-59 231.9 133 74.4
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 6.5e-59 231.5 133 77.4
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 6.5e-59 231.5 133 75.9
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 1.1e-58 230.7 152 69.7
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 1.9e-58 229.9 160 65.0
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.9e-58 229.9 133 76.7
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 3.2e-58 229.2 147 70.1
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 3.2e-58 229.2 133 76.7
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 5.5e-58 228.4 152 69.1
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 5.5e-58 228.4 133 74.4
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 9.4e-58 227.6 137 69.3
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.2e-57 227.3 158 65.2
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 1.2e-57 227.3 155 67.1
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 2.1e-57 226.5 146 66.4
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.1e-57 226.5 177 61.0
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 2.1e-57 226.5 177 61.0
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.6e-57 225.7 140 72.9
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 3.6e-57 225.7 165 63.0
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 4.6e-57 225.3 152 70.4
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 4.6e-57 225.3 134 73.9
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 6.1e-57 224.9 140 69.3
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 7.9e-57 224.6 157 70.1
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 7.9e-57 224.6 179 62.6
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 7.9e-57 224.6 162 63.6
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 1.0e-56 224.2 174 61.5
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.4e-56 223.8 151 66.2
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.4e-56 223.8 158 66.5
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.4e-56 223.8 134 69.4
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.8e-56 223.4 154 68.2
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 1.8e-56 223.4 184 58.2
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 2.3e-56 223.0 154 66.2
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 2.3e-56 223.0 166 64.5
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 3.0e-56 222.6 133 72.2
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 3.0e-56 222.6 193 57.5
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 3.9e-56 222.2 154 67.5
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 3.9e-56 222.2 136 72.1
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.9e-56 222.2 136 72.1
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 3.9e-56 222.2 176 60.8
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 5.1e-56 221.9 146 66.4
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 5.1e-56 221.9 154 66.2
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 5.1e-56 221.9 190 60.0
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 5.1e-56 221.9 154 66.9
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 6.7e-56 221.5 148 66.2
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 8.8e-56 221.1 166 63.9
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 8.8e-56 221.1 137 70.8
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 8.8e-56 221.1 176 60.2
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 8.8e-56 221.1 204 56.4
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.1e-55 220.7 146 66.4
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.5e-55 220.3 165 61.8
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 3.3e-55 219.2 133 70.7
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 3.3e-55 219.2 133 71.4
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 4.3e-55 218.8 193 57.0
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 5.7e-55 218.4 192 58.3
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 7.4e-55 218.0 155 64.5
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 1.3e-54 217.2 153 65.4
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 1.3e-54 217.2 185 60.0
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.7e-54 216.9 136 71.3
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.7e-54 216.9 154 62.3
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 3.7e-54 215.7 148 64.9
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 4.8e-54 215.3 187 56.7
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 4.8e-54 215.3 174 60.9
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 6.3e-54 214.9 133 70.7
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 6.3e-54 214.9 173 59.0
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 6.3e-54 214.9 190 56.3
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.1e-53 214.2 140 67.9
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.1e-53 214.2 176 58.0
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 1.4e-53 213.8 163 61.3
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.8e-53 213.4 186 54.8
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 3.1e-53 212.6 148 64.9
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 3.1e-53 212.6 150 65.3
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.2e-52 210.7 192 54.2
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.2e-52 210.7 134 70.1
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 7.7e-52 208.0 159 62.3
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 7.7e-52 208.0 134 68.7
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 2.2e-51 206.5 156 60.3
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 5.0e-51 205.3 154 61.0
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.4e-50 203.8 225 50.7
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 3.0e-48 196.1 158 57.6
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 2.0e-47 193.4 133 66.2
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.3e-47 192.6 192 57.8
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 1.7e-46 190.3 152 59.9
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.8e-45 186.8 159 56.0
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 5.9e-44 181.8 130 60.8
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 2.2e-43 179.9 106 73.6
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 1.2e-41 174.1 110 68.2
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.3e-38 164.1 129 61.2
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 9.1e-37 157.9 135 54.8
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.1e-33 146.7 135 54.8
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 2.7e-28 129.8 75 73.3
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.5e-28 129.0 81 70.4
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 8.5e-27 124.8 153 41.8
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.0e-24 117.9 127 52.8
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 1.2e-23 114.4 116 49.1
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 1.3e-19 100.9 58 69.0
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 1.8e-16 90.5 60 68.3
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.3e-16 90.1 56 71.4
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 3.4e-15 86.3 54 66.7
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.4e-13 80.9 83 53.0
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 1.6e-09 67.4 91 39.6
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 1.6e-09 67.4 91 39.6
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 1.6e-09 67.4 91 39.6
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 1.6e-09 67.4 91 39.6
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 3.6e-09 66.2 90 40.0


User provided reference genes

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