Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb168500 Zea mays HOM05D004819 ORTHO05D005654 1.9e-95 352.4 175 100.0
Zm00001eb269880 Zea mays HOM05D004819 ORTHO05D005654 5.0e-91 337.8 168 100.0
Zm00001eb331620 Zea mays HOM05D004819 ORTHO05D005654 5.0e-91 337.8 168 100.0
Zm00001eb339670 Zea mays HOM05D004819 ORTHO05D005654 3.8e-43 178.7 91 97.8
Zm00001eb014900 Zea mays HOM05D004819 ORTHO05D005654 2.8e-41 172.6 91 95.6
Os03g0310500 Oryza sativa ssp. japonica HOM05D004819 ORTHO05D005654 4.6e-36 155.2 91 84.6
HPP92_005425 Vanilla planifolia HOM05D004819 ORTHO05D005654 1.6e-33 146.7 93 78.5
Duzib212G0926 Durio zibethinus HOM05D004819 ORTHO05D005654 4.0e-32 142.1 91 78.0
Eucgr.H04055 Eucalyptus grandis HOM05D004819 ORTHO05D005654 4.0e-32 142.1 91 78.0
Gohir.A10G173100 Gossypium hirsutum HOM05D004819 ORTHO05D005654 4.0e-32 142.1 91 78.0
Gohir.D10G179600 Gossypium hirsutum HOM05D004819 ORTHO05D005654 4.0e-32 142.1 91 78.0
Gorai.011G200900 Gossypium raimondii HOM05D004819 ORTHO05D005654 4.0e-32 142.1 91 78.0
CiPaw.01G137100 Carya illinoinensis HOM05D004819 ORTHO05D005654 6.8e-32 141.4 91 78.0
Manes.03G205800 Manihot esculenta HOM05D004819 ORTHO05D005654 6.8e-32 141.4 91 75.8
SGA_v2.0_scaffold104G30069 Striga asiatica HOM05D004819 ORTHO05D005654 6.8e-32 141.4 91 76.9
Cpa.g.sc9.47 Carica papaya HOM05D004819 ORTHO05D005654 8.9e-32 141.0 91 75.8
PGR004G0637 Punica granatum HOM05D004819 ORTHO05D005654 1.2e-31 140.6 91 74.7
ClCG05G006610 Citrullus lanatus HOM05D004819 ORTHO05D005654 3.4e-31 139.0 91 74.7
MELO3C006720.2 Cucumis melo HOM05D004819 ORTHO05D005654 3.4e-31 139.0 91 74.7
CsaV3_3G015230 Cucumis sativus L. HOM05D004819 ORTHO05D005654 3.4e-31 139.0 91 74.7
DCAR_030463 Daucus carota HOM05D004819 ORTHO05D005654 3.4e-31 139.0 91 75.8
MD16G1152500 Malus domestica HOM05D004819 ORTHO05D005654 3.4e-31 139.0 91 78.0
GSVIVG01034928001 Vitis vinifera HOM05D004819 ORTHO05D005654 3.4e-31 139.0 94 70.2
CSS0034063 Camellia sinensis var. sinensis HOM05D004819 ORTHO05D005654 4.4e-31 138.7 91 75.8
Ciclev10004336m.g Citrus clementina HOM05D004819 ORTHO05D005654 4.4e-31 138.7 91 74.7
QL06p012610 Quercus lobata HOM05D004819 ORTHO05D005654 4.4e-31 138.7 91 73.6
Sed0001798 Sechium edule HOM05D004819 ORTHO05D005654 4.4e-31 138.7 91 73.6
Sed0007022 Sechium edule HOM05D004819 ORTHO05D005654 4.4e-31 138.7 91 72.5
CANSAT78G1713 Cannabis sativa HOM05D004819 ORTHO05D005654 5.8e-31 138.3 91 74.7
Aa31LG10G5910 Aethionema arabicum HOM05D004819 ORTHO05D005654 7.5e-31 137.9 91 74.7
ATR0693G033 Amborella trichopoda HOM05D004819 ORTHO05D005654 7.5e-31 137.9 91 73.6
MSTRG.10156 Avicennia marina HOM05D004819 ORTHO05D005654 7.5e-31 137.9 91 74.7
Lj3C833T2 Lonicera japonica HOM05D004819 ORTHO05D005654 7.5e-31 137.9 91 73.6
THA.LOC104802608 Tarenaya hassleriana HOM05D004819 ORTHO05D005654 7.5e-31 137.9 91 74.7
COL.COLO4_34600 Corchorus olitorius HOM05D004819 ORTHO05D005654 9.8e-31 137.5 91 74.7
Actinidia40384 Actinidia chinensis HOM05D004819 ORTHO05D005654 1.3e-30 137.1 91 73.6
CAN.G244.3 Capsicum annuum HOM05D004819 ORTHO05D005654 1.3e-30 137.1 91 72.5
Nitab4.5_0000931g0050 Nicotiana tabacum HOM05D004819 ORTHO05D005654 1.3e-30 137.1 91 72.5
Aqoxy2G02702 Aquilegia oxysepala HOM05D004819 ORTHO05D005654 1.7e-30 136.7 91 75.8
PSO210G2958 Papaver somniferum HOM05D004819 ORTHO05D005654 1.7e-30 136.7 91 74.7
Rhsim04G0240100 Rhododendron simsii HOM05D004819 ORTHO05D005654 1.7e-30 136.7 89 75.3
TAR365G0460 Trochodendron aralioides HOM05D004819 ORTHO05D005654 1.7e-30 136.7 91 73.6
Cc03_g00710 Coffea canephora HOM05D004819 ORTHO05D005654 2.9e-30 136.0 91 72.5
Nitab4.5_0000177g0090 Nicotiana tabacum HOM05D004819 ORTHO05D005654 2.9e-30 136.0 91 72.5
AUR62016223 Chenopodium quinoa HOM05D004819 ORTHO05D005654 3.7e-30 135.6 93 72.0
AUR62039265 Chenopodium quinoa HOM05D004819 ORTHO05D005654 3.7e-30 135.6 93 72.0
PSO761G0636 Papaver somniferum HOM05D004819 ORTHO05D005654 3.7e-30 135.6 91 73.6
TWI09G1587 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 3.7e-30 135.6 91 72.5
GSVIVG01034925001 Vitis vinifera HOM05D004819 ORTHO05D005654 3.7e-30 135.6 91 71.4
Migut.G00071 Erythranthe guttata HOM05D004819 ORTHO05D005654 4.9e-30 135.2 91 73.6
FvH4_4g19930 Fragaria vesca HOM05D004819 ORTHO05D005654 4.9e-30 135.2 91 72.5
Lsat_1_v5_gn_6_1101 Lactuca sativa HOM05D004819 ORTHO05D005654 4.9e-30 135.2 91 72.5
Atru.chr4.3039 Acer truncatum HOM05D004819 ORTHO05D005654 6.4e-30 134.8 91 72.5
Lj4g0007943 Lotus japonicus HOM05D004819 ORTHO05D005654 6.4e-30 134.8 91 72.5
Manes.15G000800 Manihot esculenta HOM05D004819 ORTHO05D005654 6.4e-30 134.8 91 72.5
Peaxi162Scf00228g00333 Petunia axillaris HOM05D004819 ORTHO05D005654 6.4e-30 134.8 91 71.4
Potri.010G146800 Populus trichocarpa HOM05D004819 ORTHO05D005654 6.4e-30 134.8 91 72.5
GSVIVG01034978001 Vitis vinifera HOM05D004819 ORTHO05D005654 6.4e-30 134.8 91 71.4
Ah.05g176730 Amaranthus hybridus HOM05D004819 ORTHO05D005654 8.3e-30 134.4 110 62.7
BcaC09g50317 Brassica carinata HOM05D004819 ORTHO05D005654 8.3e-30 134.4 91 73.6
C01p26720 Brassica napus HOM05D004819 ORTHO05D005654 8.3e-30 134.4 91 73.6
BolC1t02613H Brassica oleracea HOM05D004819 ORTHO05D005654 8.3e-30 134.4 91 73.6
Sabra10G0113000 Salix brachista HOM05D004819 ORTHO05D005654 8.3e-30 134.4 91 72.5
AL7G38910 Arabidopsis lyrata HOM05D004819 ORTHO05D005654 1.1e-29 134.0 91 73.6
AT4G16180 Arabidopsis thaliana HOM05D004819 ORTHO05D005654 1.1e-29 134.0 91 73.6
Thhalv10024420m.g Eutrema salsugineum HOM05D004819 ORTHO05D005654 1.1e-29 134.0 91 73.6
FAN12G0990 Fragaria x ananassa HOM05D004819 ORTHO05D005654 1.1e-29 134.0 91 71.4
Sc09g0007260 Simmondsia chinensis HOM05D004819 ORTHO05D005654 1.1e-29 134.0 93 71.0
Oeu046577.1 Olea europaea HOM05D004819 ORTHO05D005654 1.4e-29 133.7 91 71.4
vmacro08030 Vaccinium macrocarpon HOM05D004819 ORTHO05D005654 1.4e-29 133.7 89 74.2
Haze_01312 Corylus avellana HOM05D004819 ORTHO05D005654 1.9e-29 133.3 91 70.3
Solyc01g058730.4 Solanum lycopersicum HOM05D004819 ORTHO05D005654 1.9e-29 133.3 91 70.3
Sopen01g024570 Solanum pennellii HOM05D004819 ORTHO05D005654 1.9e-29 133.3 91 70.3
PGSC0003DMG400001205 Solanum tuberosum HOM05D004819 ORTHO05D005654 1.9e-29 133.3 91 70.3
arahy.Tifrunner.gnm1.ann1.HD9JLY Arachis hypogaea HOM05D004819 ORTHO05D005654 2.4e-29 132.9 93 68.8
arahy.Tifrunner.gnm1.ann1.ZA4S8T Arachis hypogaea HOM05D004819 ORTHO05D005654 2.4e-29 132.9 93 68.8
Carub.0007s2536 Capsella rubella HOM05D004819 ORTHO05D005654 2.4e-29 132.9 91 73.6
CARHR222550 Cardamine hirsuta HOM05D004819 ORTHO05D005654 2.4e-29 132.9 91 72.5
Lsat_1_v5_gn_1_41600 Lactuca sativa HOM05D004819 ORTHO05D005654 2.4e-29 132.9 91 71.4
Prupe.1G115700 Prunus persica HOM05D004819 ORTHO05D005654 2.4e-29 132.9 91 70.3
TWI53G0610 Tripterygium wilfordii HOM05D004819 ORTHO05D005654 2.4e-29 132.9 91 71.4
EL10Ac3g05522 Beta vulgaris HOM05D004819 ORTHO05D005654 3.2e-29 132.5 93 71.0
BcaNung00215 Brassica carinata HOM05D004819 ORTHO05D005654 3.2e-29 132.5 91 72.5
FAN07G2526 Fragaria x ananassa HOM05D004819 ORTHO05D005654 3.2e-29 132.5 91 71.4
HanXRQChr02g0048601 Helianthus annuus HOM05D004819 ORTHO05D005654 3.2e-29 132.5 91 70.3
Nn4g25546 Nelumbo nucifera HOM05D004819 ORTHO05D005654 3.2e-29 132.5 91 70.3
Oeu052162.4 Olea europaea HOM05D004819 ORTHO05D005654 3.2e-29 132.5 91 71.4
RcHm_v2.0_Chr4g0425571 Rosa chinensis HOM05D004819 ORTHO05D005654 3.2e-29 132.5 91 71.4
BcaC06g33458 Brassica carinata HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
A01p21370 Brassica napus HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
A03p49650 Brassica napus HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
C07p47720 Brassica napus HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
BolC7t45297H Brassica oleracea HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
BraA01t02042Z Brassica rapa HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
BraA03t14064Z Brassica rapa HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
Cfa015302 Carpinus fangiana HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 69.2
Ca_21436_v3 Cicer arietinum L. HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 71.4
Sp7g14690 Schrenkiella parvula HOM05D004819 ORTHO05D005654 4.1e-29 132.1 91 72.5
VMungo1215G1911 Vigna mungo HOM05D004819 ORTHO05D005654 9.2e-29 131.0 91 69.2
Glyma.07G238900 Glycine max HOM05D004819 ORTHO05D005654 1.2e-28 130.6 91 70.3
Phvul.003G115600 Phaseolus vulgaris HOM05D004819 ORTHO05D005654 1.2e-28 130.6 91 69.2
Thecc.04G302500 Theobroma cacao HOM05D004819 ORTHO05D005654 1.2e-28 130.6 89 71.9
TPR.G25430 Trifolium pratense HOM05D004819 ORTHO05D005654 1.2e-28 130.6 91 70.3
ECA233G5711 Erigeron canadensis HOM05D004819 ORTHO05D005654 1.6e-28 130.2 91 70.3
Lalb_Chr07g0182051 Lupinus albus HOM05D004819 ORTHO05D005654 2.0e-28 129.8 91 69.2
BcaC06g32994 Brassica carinata HOM05D004819 ORTHO05D005654 4.6e-28 128.6 91 70.3
Nn2g14951 Nelumbo nucifera HOM05D004819 ORTHO05D005654 6.0e-28 128.3 91 70.3
Psat4g022840 Pisum sativum HOM05D004819 ORTHO05D005654 1.7e-27 126.7 91 68.1
Glyma.17G034800 Glycine max HOM05D004819 ORTHO05D005654 2.3e-27 126.3 91 67.0
Hund03132 Selenicereus undatus HOM05D004819 ORTHO05D005654 8.6e-27 124.4 83 71.1
unitig_88.g27704 Utricularia gibba HOM05D002812 ORTHO05D005654 1.5e-26 123.6 91 67.0
HanXRQChr11g0353871 Helianthus annuus HOM05D004819 ORTHO05D005654 4.7e-25 118.6 89 64.0
Zm00001eb305610 Zea mays HOM05D004819 ORTHO05D005654 6.2e-25 118.2 61 93.4
SalBow8G2376 Salvia bowleyana HOM05D004819 ORTHO05D005654 5.2e-24 115.2 90 64.4
CDE02G0522 Ceratophyllum demersum HOM05D004819 ORTHO05D005654 1.5e-23 113.6 91 65.9
SMO298G0056 Selaginella moellendorffii HOM05D004819 ORTHO05D005654 6.4e-22 108.2 89 59.6
Mapoly0066s0100 Marchantia polymorpha HOM05D004819 ORTHO05D005654 1.6e-20 103.6 89 56.2
AagrBONN_evm.TU.Sc2ySwM_362.583 Anthoceros agrestis HOM05D004819 ORTHO05D005654 4.6e-20 102.1 90 54.4
Pp3c5_14560 Physcomitrium patens HOM05D004819 ORTHO05D005654 3.0e-19 99.4 88 53.4
Eucgr.H04185 Eucalyptus grandis HOM05D004819 ORTHO05D005654 9.5e-18 94.4 64 75.0
Potri.008G104100 Populus trichocarpa HOM05D004819 ORTHO05D005654 4.7e-17 92.0 67 67.2
GSVIVG01034914001 Vitis vinifera HOM05D004819 ORTHO05D005654 4.0e-16 89.0 79 53.2
RcHm_v2.0_Chr4g0401771 Rosa chinensis HOM05D004819 ORTHO05D005654 5.2e-16 88.6 102 49.0
SHI00124 Sapria himalayana HOM05D004819 ORTHO05D005654 7.6e-15 84.7 131 35.9
CBR_g61507 Chara braunii HOM05D004819 ORTHO05D005654 9.9e-07 57.8 89 33.7


User provided reference genes

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