Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb167860 Zea mays HOM05D010462 ORTHO05D012694 3.8e-251 870.9 408 100.0
Zm00001eb167880 Zea mays HOM05D010462 ORTHO05D012694 1.3e-214 749.6 412 87.6
Zm00001eb236630 Zea mays HOM05D010462 ORTHO05D012694 2.1e-209 732.3 411 86.1
Zm00001eb167900 Zea mays HOM05D010462 ORTHO05D012694 1.1e-114 417.5 410 53.9
Zm00001eb290010 Zea mays HOM05D010462 ORTHO05D012694 3.3e-61 240.0 423 43.0
Zm00001eb290020 Zea mays HOM05D010462 ORTHO05D012694 3.6e-60 236.5 427 41.5
Os05g0539300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 8.1e-60 235.3 441 39.2
Zm00001eb290070 Zea mays HOM05D010462 ORTHO05D012694 8.9e-59 231.9 419 42.0
Os05g0539150 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 2.0e-58 230.7 432 37.3
Zm00001eb290000 Zea mays HOM05D010462 ORTHO05D012694 1.1e-56 224.9 411 41.1
Zm00001eb290060 Zea mays HOM05D010462 ORTHO05D012694 1.3e-54 218.0 425 40.5
Os05g0570200 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 8.7e-46 188.7 414 36.2
Zm00001eb290090 Zea mays HOM05D010462 ORTHO05D012694 8.7e-46 188.7 417 37.4
Os05g0570350 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 4.3e-45 186.4 422 34.8
Os05g0537700 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 5.8e-34 149.4 394 33.5
Os01g0660700 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 9.3e-24 115.5 433 28.4
Os01g0673300 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.8e-22 111.3 423 28.4
Os02g0318200 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 2.5e-21 107.5 426 28.2
Os01g0774400 Oryza sativa ssp. japonica HOM05D010462 ORTHO05D012694 1.0e-17 95.5 91 47.3
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-12 78.6 427 26.5
MBI17_g17504_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.2e-10 72.0 430 26.0
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.4e-10 70.5 410 24.6
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.4e-10 70.5 407 24.3
Aqoxy3G03852 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-08 65.1 151 29.8
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.2e-08 63.9 213 26.8
QL11p010874 Quercus lobata HOM05D000151 ORTHO05D000074 4.2e-08 63.5 422 23.9
Zm00001eb167580 Zea mays HOM05D011330 ORTHO05D013903 5.5e-08 63.2 392 26.3
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-07 62.0 421 24.0
Aqoxy6G02936 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.6e-07 61.6 209 30.1
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 1.6e-07 61.6 434 26.0
Aqoxy3G03847 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.7e-07 60.8 144 31.9
Os11g0595100 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 1.0e-06 58.9 383 23.2
Os12g0585300 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 1.8e-06 58.2 372 22.6
PGR042G0362 Punica granatum HOM05D000151 ORTHO05D000074 1.8e-06 58.2 94 37.2
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.1e-06 56.6 147 32.0
Aqoxy5G01964 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.7e-06 56.2 169 30.2
Os08g0293200 Oryza sativa ssp. japonica HOM05D011330 ORTHO05D013903 6.7e-06 56.2 189 30.7


User provided reference genes

Program Settings