Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb166860 Zea mays HOM05D007295 ORTHO05D007705 4.9e-67 258.1 128 100.0
Zm00001eb391340 Zea mays HOM05D007295 ORTHO05D007705 1.4e-66 256.5 128 99.2
Zm00001eb056170 Zea mays HOM05D007295 ORTHO05D007705 7.1e-66 254.2 128 98.4
Zm00001eb390800 Zea mays HOM05D007295 ORTHO05D007705 2.5e-63 245.7 126 95.2
Zm00001eb015410 Zea mays HOM05D007295 ORTHO05D007705 1.6e-57 226.5 175 69.7
Zm00001eb113300 Zea mays HOM05D007295 ORTHO05D007705 3.0e-56 222.2 175 69.1
Zm00001eb077000 Zea mays HOM05D007295 ORTHO05D030361 2.5e-42 176.0 128 73.4
Zm00001eb197800 Zea mays HOM05D007295 ORTHO05D007705 9.1e-29 131.0 90 67.8
Zm00001eb279690 Zea mays HOM05D007295 ORTHO05D007705 9.1e-29 131.0 90 67.8
Zm00001eb312550 Zea mays HOM05D007295 ORTHO05D030361 1.5e-28 130.2 122 63.1
Zm00001eb004080 Zea mays HOM05D007295 ORTHO05D007705 2.6e-28 129.4 90 67.8
Zm00001eb211670 Zea mays HOM05D007295 ORTHO05D007705 3.5e-28 129.0 169 46.7
Zm00001eb046270 Zea mays HOM05D007295 ORTHO05D007705 4.5e-28 128.6 86 69.8
Zm00001eb087940 Zea mays HOM05D007295 ORTHO05D007705 1.0e-27 127.5 165 47.3
Zm00001eb242210 Zea mays HOM05D007295 ORTHO05D007705 1.7e-27 126.7 165 47.3
Zm00001eb389250 Zea mays HOM05D007295 ORTHO05D007705 1.7e-27 126.7 84 70.2
Zm00001eb270430 Zea mays HOM05D007295 ORTHO05D007705 2.5e-26 122.9 124 57.3
Os02g0813200 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 1.2e-25 120.6 88 64.8
Os06g0595700 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 2.7e-25 119.4 88 64.8
Os01g0894050 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 4.7e-25 118.6 84 66.7
Os12g0299650 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 4.7e-25 118.6 84 66.7
Zm00001eb300210 Zea mays HOM05D007295 ORTHO05D007705 4.7e-25 118.6 90 64.4
Os05g0218001 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 6.1e-25 118.2 163 43.6
Os06g0481800 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 6.1e-25 118.2 84 66.7
Zm00001eb384140 Zea mays HOM05D007295 ORTHO05D007705 2.0e-23 113.2 83 62.7
Zm00001eb018820 Zea mays HOM05D007295 ORTHO05D007705 4.1e-21 105.5 94 55.3
Zm00001eb090610 Zea mays HOM05D007295 ORTHO05D007705 9.1e-21 104.4 90 56.7
Zm00001eb019020 Zea mays HOM05D007295 ORTHO05D007705 4.5e-20 102.1 94 54.3
Zm00001eb180320 Zea mays HOM05D007295 ORTHO05D007705 3.6e-17 92.4 67 64.2
Zm00001eb063180 Zea mays HOM05D007295 ORTHO05D007705 4.7e-17 92.0 98 48.0
Zm00001eb237400 Zea mays HOM05D007295 ORTHO05D007705 4.7e-17 92.0 84 52.4
Zm00001eb367280 Zea mays HOM05D007295 ORTHO05D007705 4.7e-17 92.0 98 48.0
Zm00001eb401020 Zea mays HOM05D007295 ORTHO05D007705 4.7e-17 92.0 98 48.0
Zm00001eb010720 Zea mays HOM05D007295 ORTHO05D007705 6.1e-17 91.7 84 52.4
Zm00001eb024970 Zea mays HOM05D007295 ORTHO05D007705 6.1e-17 91.7 84 52.4
Zm00001eb086670 Zea mays HOM05D007295 ORTHO05D007705 6.1e-17 91.7 84 52.4
Zm00001eb273910 Zea mays HOM05D007295 ORTHO05D007705 6.1e-17 91.7 84 52.4
Zm00001eb045190 Zea mays HOM05D007295 ORTHO05D007705 8.0e-17 91.3 80 52.5
Zm00001eb171470 Zea mays HOM05D007295 ORTHO05D007705 2.3e-16 89.7 181 34.3
Zm00001eb385640 Zea mays HOM05D007295 ORTHO05D007705 4.0e-16 89.0 82 50.0
Zm00001eb090020 Zea mays HOM05D007295 ORTHO05D007705 5.2e-16 88.6 95 40.0
Zm00001eb180120 Zea mays HOM05D007295 ORTHO05D007705 5.2e-16 88.6 95 40.0
Zm00001eb380560 Zea mays HOM05D007295 ORTHO05D007705 6.8e-16 88.2 62 66.1
Zm00001eb035520 Zea mays HOM05D011105 ORTHO05D007705 2.6e-15 86.3 95 38.9
Zm00001eb411270 Zea mays HOM05D007295 ORTHO05D007705 2.6e-15 86.3 80 52.5
Zm00001eb121750 Zea mays HOM05D007295 ORTHO05D007705 5.7e-15 85.1 94 42.6
Zm00001eb386100 Zea mays HOM05D007295 ORTHO05D007705 8.3e-14 81.3 91 41.8
Zm00001eb373830 Zea mays HOM05D007295 ORTHO05D007705 1.6e-12 77.0 83 43.4
Zm00001eb236790 Zea mays HOM05D007295 ORTHO05D007705 3.5e-12 75.9 85 44.7
Zm00001eb331910 Zea mays HOM05D007295 ORTHO05D007705 4.5e-12 75.5 71 49.3
Zm00001eb379810 Zea mays HOM05D007295 ORTHO05D007705 1.3e-11 73.9 69 53.6
Zm00001eb136070 Zea mays HOM05D007295 ORTHO05D007705 5.0e-11 72.0 57 59.6
Zm00001eb136260 Zea mays HOM05D007295 ORTHO05D007705 3.2e-10 69.3 83 38.6
Zm00001eb079960 Zea mays HOM05D007295 ORTHO05D007705 9.4e-10 67.8 51 60.8
Zm00001eb224540 Zea mays HOM05D007295 ORTHO05D007705 9.4e-10 67.8 51 60.8
Zm00001eb020010 Zea mays HOM05D007295 ORTHO05D007705 1.2e-09 67.4 78 37.2
Zm00001eb424390 Zea mays HOM05D007295 ORTHO05D007705 4.7e-09 65.5 83 36.1
Os04g0463600 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 1.0e-08 64.3 86 36.0
Zm00001eb345220 Zea mays HOM05D007295 ORTHO05D007705 1.4e-08 63.9 42 69.0
Zm00001eb001660 Zea mays HOM05D007295 ORTHO05D007705 1.8e-08 63.5 99 35.4
Zm00001eb086590 Zea mays HOM05D007295 ORTHO05D007705 2.3e-08 63.2 42 66.7
Zm00001eb122800 Zea mays HOM05D007295 ORTHO05D007705 2.3e-08 63.2 69 39.1
Zm00001eb250130 Zea mays HOM05D007295 ORTHO05D007705 6.8e-08 61.6 63 39.7
Zm00001eb093810 Zea mays HOM05D007295 ORTHO05D007705 1.2e-07 60.8 108 32.4
Os03g0643100 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.5e-07 60.5 75 38.7
Os07g0115800 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.5e-07 60.5 75 38.7
Os07g0210800 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.5e-07 60.5 75 38.7
Os09g0122200 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.5e-07 60.5 75 38.7
Os10g0468301 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.5e-07 60.5 75 38.7
Zm00001eb338830 Zea mays HOM05D007295 ORTHO05D007705 1.5e-07 60.5 70 38.6
Zm00001eb279200 Zea mays HOM05D007295 ORTHO05D007705 2.6e-07 59.7 53 50.9
Zm00001eb391510 Zea mays HOM05D007295 ORTHO05D007705 4.4e-07 58.9 52 50.0
Zm00001eb345330 Zea mays HOM05D007295 ORTHO05D007705 5.7e-07 58.5 53 49.1
Zm00001eb274350 Zea mays HOM05D007295 ORTHO05D007705 9.8e-07 57.8 68 38.2
Zm00001eb236750 Zea mays HOM05D007295 ORTHO05D007705 1.3e-06 57.4 68 38.2
Zm00001eb375080 Zea mays HOM05D007295 ORTHO05D007705 1.3e-06 57.4 68 38.2
ATR1089G093 Amborella trichopoda HOM05D000665 ORTHO05D000140 1.7e-06 57.0 74 33.8
Zm00001eb129150 Zea mays HOM05D007295 ORTHO05D007705 1.7e-06 57.0 36 69.4
Zm00001eb196690 Zea mays HOM05D007295 ORTHO05D007705 1.7e-06 57.0 76 36.8
Zm00001eb332310 Zea mays HOM05D007295 ORTHO05D007705 4.9e-06 55.5 35 68.6
Zm00001eb389300 Zea mays HOM05D007295 ORTHO05D007705 4.9e-06 55.5 35 68.6
MBI13_g43752_MAGBIO Magnolia biondii HOM05D000665 ORTHO05D000140 8.3e-06 54.7 88 30.7


User provided reference genes

Program Settings