Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.6e-32 141.0 71 100.0
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.8e-31 138.7 70 98.6
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 3.2e-28 127.9 69 89.9
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 9.2e-28 126.3 68 89.7
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 2.6e-22 108.2 69 76.8
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 3.4e-22 107.8 66 77.3
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 5.8e-22 107.1 69 73.9
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 7.5e-22 106.7 69 75.4
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 7.5e-22 106.7 69 75.4
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 9.8e-22 106.3 69 73.9
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.7e-21 105.5 69 73.9
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.2e-21 105.1 70 71.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.2e-21 105.1 65 76.9
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.9e-21 104.8 69 71.0
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 3.7e-21 104.4 69 75.4
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 3.7e-21 104.4 70 71.4
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 3.7e-21 104.4 69 72.5
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 3.7e-21 104.4 66 75.8
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 4.9e-21 104.0 69 72.5
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 6.4e-21 103.6 70 72.9
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.4e-21 103.6 70 72.9
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.4e-21 103.6 70 72.9
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.4e-21 103.6 70 72.9
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 6.4e-21 103.6 70 70.0
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 8.3e-21 103.2 64 76.6
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.1e-20 102.8 70 71.4
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.4e-20 102.4 66 72.7
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.4e-20 102.4 64 75.0
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.4e-20 102.4 70 70.0
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.4e-20 102.4 70 70.0
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 1.9e-20 102.1 70 70.0
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.4e-20 101.7 69 71.0
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 2.4e-20 101.7 70 68.6
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 2.4e-20 101.7 70 71.4
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 2.4e-20 101.7 70 70.0
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.4e-20 101.7 70 67.1
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.4e-20 101.7 70 67.1
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 2.4e-20 101.7 69 69.6
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.2e-20 101.3 69 68.1
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 3.2e-20 101.3 67 68.7
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 5.4e-20 100.5 70 68.6
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 7.0e-20 100.1 66 71.2
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 7.0e-20 100.1 70 71.4
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 7.0e-20 100.1 66 71.2
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.2e-19 99.4 70 71.4
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.2e-19 99.4 69 72.5
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.6e-19 99.0 65 73.8
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 2.1e-19 98.6 69 71.0
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.5e-19 97.8 66 69.7
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 3.5e-19 97.8 70 65.7
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 4.6e-19 97.4 70 68.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 6.0e-19 97.1 70 68.6
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 6.0e-19 97.1 80 67.5
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 6.0e-19 97.1 66 71.2
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.0e-19 97.1 69 66.7
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.0e-19 97.1 69 66.7
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 6.0e-19 97.1 72 69.4
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 7.8e-19 96.7 70 65.7
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.0e-18 96.3 69 65.2
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.0e-18 94.7 69 63.8
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 6.6e-18 93.6 65 70.8
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 6.6e-18 93.6 65 70.8
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 6.6e-18 93.6 66 65.2
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 6.6e-18 93.6 65 70.8
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 6.6e-18 93.6 65 70.8
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 8.6e-18 93.2 65 70.8
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 8.6e-18 93.2 69 66.7
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.1e-17 92.8 97 54.6
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 1.5e-17 92.4 59 74.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.5e-17 92.4 69 63.8
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.9e-17 92.0 65 67.7
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.9e-17 92.0 65 67.7
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 2.5e-17 91.7 64 70.3
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 3.3e-17 91.3 65 69.2
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 3.3e-17 91.3 78 60.3
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 3.3e-17 91.3 64 65.6
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 4.3e-17 90.9 68 66.2
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 5.6e-17 90.5 63 68.3
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 9.5e-17 89.7 65 67.7
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 2.1e-16 88.6 83 60.2
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 3.6e-16 87.8 70 67.1
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 4.7e-16 87.4 70 68.6
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 4.7e-16 87.4 66 68.2
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 6.2e-16 87.0 64 65.6
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 6.8e-15 83.6 67 59.7
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.2e-14 82.8 64 65.6
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 6.4e-13 77.0 69 60.9
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.4e-12 75.9 69 59.4
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 4.1e-12 74.3 50 72.0
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 4.1e-12 74.3 129 38.0
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.2e-11 72.8 50 68.0
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 1.0e-10 69.7 39 82.1
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 1.7e-10 68.9 50 68.0
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 6.6e-10 67.0 36 83.3
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 6.6e-10 67.0 41 75.6
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 1.9e-09 65.5 164 31.7
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 1.9e-09 65.5 39 79.5
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.5e-09 65.1 36 80.6
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 9.5e-09 63.2 37 81.1
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 2.1e-08 62.0 65 55.4
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 2.1e-08 62.0 39 74.4
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 2.1e-08 62.0 33 87.9
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 4.7e-08 60.8 40 72.5
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.2e-08 60.5 39 71.8
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 6.2e-08 60.5 52 59.6
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 4.0e-07 57.8 35 74.3
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 5.2e-07 57.4 71 45.1
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 5.2e-07 57.4 38 68.4
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 5.2e-07 57.4 40 72.5
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 1.5e-06 55.8 66 47.0
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 2.0e-06 55.5 35 68.6
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 2.0e-06 55.5 52 55.8


User provided reference genes

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