Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 1.4e-209 732.6 366 100.0
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 2.7e-139 499.2 292 84.9
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 2.7e-139 499.2 311 80.7
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 4.6e-139 498.4 292 83.9
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 1.0e-138 497.3 292 84.9
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 1.7e-138 496.5 310 79.7
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 2.3e-138 496.1 292 84.2
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 3.0e-138 495.7 337 76.3
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 2.5e-137 492.7 292 84.2
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 4.3e-137 491.9 294 82.7
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 7.3e-137 491.1 291 83.8
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 7.3e-137 491.1 291 83.8
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 2.1e-136 489.6 292 82.9
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 4.7e-136 488.4 292 83.9
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 8.1e-136 487.6 293 83.3
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 1.4e-135 486.9 298 81.2
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 1.4e-135 486.9 348 73.3
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 1.8e-135 486.5 293 83.3
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 1.8e-135 486.5 292 82.2
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.8e-135 486.5 295 81.4
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 1.8e-135 486.5 285 83.9
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 2.4e-135 486.1 292 82.2
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 4.0e-135 485.3 293 83.3
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 5.2e-135 485.0 293 82.9
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 5.2e-135 485.0 329 74.5
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 8.9e-135 484.2 292 83.6
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 8.9e-135 484.2 300 81.3
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 1.2e-134 483.8 293 82.6
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 1.2e-134 483.8 293 82.6
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 1.5e-134 483.4 298 81.5
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 2.0e-134 483.0 293 82.6
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 2.0e-134 483.0 292 81.8
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 2.6e-134 482.6 292 83.2
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 3.4e-134 482.3 292 82.2
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 4.4e-134 481.9 293 82.3
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 4.4e-134 481.9 296 81.1
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 5.8e-134 481.5 288 82.6
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 7.6e-134 481.1 292 81.2
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 7.6e-134 481.1 292 80.8
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 1.3e-133 480.3 291 81.8
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 1.7e-133 479.9 292 81.8
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 1.7e-133 479.9 292 82.9
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 4.9e-133 478.4 292 81.8
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 1.4e-132 476.9 297 81.1
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 2.4e-132 476.1 292 81.2
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 2.4e-132 476.1 299 81.3
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 3.2e-132 475.7 311 77.5
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 5.4e-132 474.9 309 78.3
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 5.4e-132 474.9 298 81.9
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 5.4e-132 474.9 298 79.5
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 9.3e-132 474.2 292 81.2
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 1.2e-131 473.8 301 79.7
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 1.2e-131 473.8 326 74.2
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 1.6e-131 473.4 333 73.9
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 2.7e-131 472.6 285 81.4
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 4.6e-131 471.9 291 80.8
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 4.6e-131 471.9 306 78.8
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 6.0e-131 471.5 301 80.1
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 6.0e-131 471.5 303 77.6
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 3.0e-130 469.2 285 82.1
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 3.0e-130 469.2 325 74.2
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 5.1e-130 468.4 282 81.9
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 8.1e-128 461.1 310 75.8
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 1.1e-127 460.7 278 82.0
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 1.8e-127 459.9 287 80.1
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 4.4e-126 455.3 344 69.8
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 2.2e-125 453.0 307 75.2
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 3.8e-125 452.2 310 74.8
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 3.8e-125 452.2 299 77.3
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 4.2e-124 448.7 309 75.4
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 5.6e-121 438.3 271 80.1
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 7.4e-121 438.0 303 73.6
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 6.9e-119 431.4 292 74.0
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 1.2e-115 420.6 292 74.7
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 7.9e-115 417.9 308 70.8
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 8.7e-114 414.5 294 72.1
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 8.7e-114 414.5 255 80.4
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 1.8e-111 406.8 306 69.9
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 1.8e-111 406.8 289 68.9
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 1.3e-109 400.6 247 81.8
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 2.9e-109 399.4 292 72.6
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 7.1e-108 394.8 292 72.6
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 3.7e-104 382.5 334 63.5
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 2.2e-101 373.2 361 59.0
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 3.8e-101 372.5 221 83.3
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 6.5e-101 371.7 215 84.2
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 2.5e-100 369.8 284 69.7
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 7.2e-100 368.2 294 68.7
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 1.0e-98 364.4 284 69.0
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 4.3e-97 359.0 292 66.4
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 4.3e-97 359.0 294 65.6
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 1.5e-94 350.5 296 60.8
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 1.5e-94 350.5 297 62.0
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 4.2e-92 342.4 379 51.7
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 1.0e-90 337.8 298 60.7
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 1.7e-85 320.5 189 84.1
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 5.7e-81 305.4 205 76.1
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 2.8e-80 303.1 203 75.9
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 9.4e-76 288.1 200 76.0
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 1.7e-72 277.3 194 77.3
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 2.1e-67 260.4 156 84.0
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 1.2e-65 254.6 155 80.6
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 3.5e-62 243.0 139 84.2
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 1.1e-60 238.0 155 80.6
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 3.2e-60 236.5 246 56.5
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 3.2e-60 236.5 246 56.5
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 3.2e-60 236.5 246 56.5
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 5.5e-60 235.7 174 68.4
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 1.2e-59 234.6 144 79.9
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 8.8e-58 228.4 248 57.3
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 7.5e-57 225.3 130 83.8
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 4.5e-54 216.1 131 80.2
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 1.4e-47 194.5 299 43.5
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 1.0e-42 178.3 105 84.8
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 1.2e-41 174.9 128 70.3
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 4.1e-39 166.4 114 77.2
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 1.1e-36 158.3 116 69.8
Peaxi162Scf00261g01011 Petunia axillaris HOM05D005057 ORTHO05D006570 1.1e-34 151.8 102 70.6
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 3.1e-34 150.2 84 85.7
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 1.3e-29 134.8 92 76.1
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 5.1e-29 132.9 92 75.0
Nitab4.5_0003322g0060 Nicotiana tabacum HOM05D005057 ORTHO05D006570 5.6e-28 129.4 81 74.1
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 2.1e-27 127.5 74 74.3
Nitab4.5_0000681g0220 Nicotiana tabacum HOM05D005057 ORTHO05D006570 2.8e-27 127.1 81 72.8
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 4.7e-27 126.3 124 56.5
Lalb_Chr18g0059161 Lupinus albus HOM05D005057 ORTHO05D006570 1.2e-25 121.7 83 71.1
RcHm_v2.0_Chr5g0010591 Rosa chinensis HOM05D005057 ORTHO05D006570 1.3e-21 108.2 71 76.1
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 1.2e-19 101.7 86 58.1
HPP92_020184 Vanilla planifolia HOM05D005057 ORTHO05D006570 4.7e-19 99.8 61 77.0
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 4.0e-18 96.7 62 71.0
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 1.6e-11 74.7 73 50.7
BolC8t49834H Brassica oleracea HOM05D005057 ORTHO05D019871 2.4e-07 60.8 132 33.3
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 5.4e-07 59.7 31 83.9
COL.COLO4_28251 Corchorus olitorius HOM05D005057 ORTHO05D006570 6.0e-06 56.2 60 50.0


User provided reference genes

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