Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb160940 Zea mays HOM05D015210 ORTHO05D003958 3.9e-111 404.8 209 100.0
Zm00001eb160900 Zea mays HOM05D015210 ORTHO05D003958 8.2e-101 370.5 210 93.8
Zm00001eb160970 Zea mays HOM05D015210 ORTHO05D003958 1.0e-98 363.6 210 90.5
Zm00001eb160910 Zea mays HOM05D015210 ORTHO05D003958 4.0e-95 351.7 205 92.2
Zm00001eb160930 Zea mays HOM05D015210 ORTHO05D003958 5.7e-94 347.8 202 90.1
Zm00001eb160920 Zea mays HOM05D015210 ORTHO05D003958 7.5e-94 347.4 207 88.4
Zm00001eb160980 Zea mays HOM05D015210 ORTHO05D003958 2.0e-78 296.2 236 71.6
Zm00001eb160960 Zea mays HOM05D015210 ORTHO05D003958 1.0e-42 177.6 104 92.3
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 3.5e-27 125.9 237 43.5
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 7.1e-20 101.7 217 43.3
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 7.9e-11 71.6 146 40.4
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 2.3e-10 70.1 70 51.4
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 3.9e-10 69.3 69 52.2
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 8.7e-10 68.2 69 52.2
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 1.5e-09 67.4 71 52.1
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 1.5e-09 67.4 69 50.7
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.9e-09 67.0 121 38.0
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 4.3e-09 65.9 64 50.0
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 5.7e-09 65.5 76 44.7
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 9.7e-09 64.7 70 47.1
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 9.7e-09 64.7 70 47.1
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 1.6e-08 63.9 110 41.8
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 2.2e-08 63.5 70 47.1
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 2.8e-08 63.2 70 47.1
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 3.7e-08 62.8 69 49.3
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 4.8e-08 62.4 71 52.1
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 6.3e-08 62.0 69 47.8
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 8.2e-08 61.6 69 47.8
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 8.2e-08 61.6 70 47.1
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 8.2e-08 61.6 70 45.7
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 1.1e-07 61.2 69 47.8
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 1.4e-07 60.8 69 44.9
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.4e-07 60.8 59 55.9
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 1.4e-07 60.8 70 51.4
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.4e-07 60.8 70 51.4
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 1.8e-07 60.5 69 50.7
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 2.4e-07 60.1 75 46.7
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 2.4e-07 60.1 70 45.7
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.4e-07 60.1 70 48.6
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 3.1e-07 59.7 69 43.5
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.1e-07 59.7 56 48.2
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.1e-07 59.7 56 48.2
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 3.1e-07 59.7 56 46.4
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 4.1e-07 59.3 70 50.0
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 4.1e-07 59.3 56 44.6
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 4.1e-07 59.3 70 50.0
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 5.3e-07 58.9 76 47.4
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 6.9e-07 58.5 69 46.4
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 6.9e-07 58.5 69 46.4
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 6.9e-07 58.5 70 45.7
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 6.9e-07 58.5 70 47.1
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 9.0e-07 58.2 70 45.7
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 9.0e-07 58.2 69 44.9
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 1.2e-06 57.8 69 44.9
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 1.2e-06 57.8 70 50.0
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 1.2e-06 57.8 70 47.1
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 1.5e-06 57.4 60 51.7
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 1.5e-06 57.4 70 48.6
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 2.0e-06 57.0 68 44.1
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 2.6e-06 56.6 70 48.6
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 3.4e-06 56.2 57 52.6
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 3.4e-06 56.2 56 46.4
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 5.9e-06 55.5 69 40.6
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 5.9e-06 55.5 67 44.8
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 5.9e-06 55.5 64 46.9
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 7.7e-06 55.1 69 40.6
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 7.7e-06 55.1 56 50.0
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 7.7e-06 55.1 69 42.0
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 7.7e-06 55.1 169 26.6
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.0e-05 54.7 64 43.8
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.0e-05 54.7 56 46.4
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 1.0e-05 54.7 90 40.0


User provided reference genes

Program Settings