Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb160910 Zea mays HOM05D015210 ORTHO05D003958 2.8e-109 398.7 206 100.0
Zm00001eb160900 Zea mays HOM05D015210 ORTHO05D003958 1.4e-100 369.8 203 94.6
Zm00001eb160940 Zea mays HOM05D015210 ORTHO05D003958 5.1e-95 351.3 205 92.2
Zm00001eb160970 Zea mays HOM05D015210 ORTHO05D003958 9.6e-94 347.1 205 89.8
Zm00001eb160920 Zea mays HOM05D015210 ORTHO05D003958 6.9e-92 340.9 210 86.7
Zm00001eb160930 Zea mays HOM05D015210 ORTHO05D003958 3.8e-90 335.1 202 87.1
Zm00001eb160980 Zea mays HOM05D015210 ORTHO05D003958 2.4e-76 289.3 231 71.4
Zm00001eb160960 Zea mays HOM05D015210 ORTHO05D003958 5.0e-42 175.3 90 96.7
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 2.8e-24 116.3 238 42.9
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 2.0e-19 100.1 208 45.2
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 2.3e-15 86.7 219 39.3
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.5e-09 67.4 69 47.8
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 1.9e-09 67.0 70 51.4
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 1.9e-09 67.0 69 50.7
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 3.3e-09 66.2 70 48.6
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 4.3e-09 65.9 110 42.7
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 2.1e-08 63.5 69 47.8
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 2.1e-08 63.5 70 45.7
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 2.1e-08 63.5 70 45.7
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 3.6e-08 62.8 136 32.4
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 4.7e-08 62.4 71 52.1
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 4.7e-08 62.4 70 45.7
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 6.2e-08 62.0 69 44.9
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 6.2e-08 62.0 70 45.7
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 6.2e-08 62.0 70 47.1
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 8.1e-08 61.6 64 46.9
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 1.1e-07 61.2 69 44.9
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 1.4e-07 60.8 69 47.8
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.3e-07 60.1 70 45.7
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 2.3e-07 60.1 70 44.3
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 2.3e-07 60.1 69 46.4
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.1e-07 59.7 57 52.6
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 3.1e-07 59.7 69 46.4
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 3.1e-07 59.7 70 50.0
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 3.1e-07 59.7 70 50.0
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 4.0e-07 59.3 66 50.0
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 4.0e-07 59.3 70 50.0
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 4.0e-07 59.3 69 46.4
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 4.0e-07 59.3 56 44.6
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 5.2e-07 58.9 70 44.3
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 6.8e-07 58.5 69 42.0
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 6.8e-07 58.5 56 46.4
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 6.8e-07 58.5 56 46.4
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 6.8e-07 58.5 56 44.6
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 6.8e-07 58.5 70 47.1
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 6.8e-07 58.5 76 47.4
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 8.9e-07 58.2 69 49.3
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 8.9e-07 58.2 70 48.6
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 1.2e-06 57.8 70 45.7
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 2.0e-06 57.0 70 45.7
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 2.6e-06 56.6 70 45.7
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 3.4e-06 56.2 64 46.9
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 3.4e-06 56.2 82 40.2
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 4.4e-06 55.8 60 50.0
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 4.4e-06 55.8 69 43.5
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 5.8e-06 55.5 70 47.1
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 5.8e-06 55.5 68 42.6
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 5.8e-06 55.5 189 29.1
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 7.5e-06 55.1 56 44.6
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 9.9e-06 54.7 69 43.5
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 9.9e-06 54.7 69 43.5


User provided reference genes

Program Settings