Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 2.8e-244 848.2 432 100.0
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 1.0e-182 643.7 423 80.1
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 5.1e-97 359.0 399 48.6
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 3.3e-96 356.3 395 49.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 3.8e-92 342.8 398 47.7
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 2.7e-90 336.7 381 47.5
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 1.1e-86 324.7 415 45.5
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 3.1e-86 323.2 395 45.6
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 3.8e-84 316.2 397 44.1
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 9.4e-83 311.6 397 44.3
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 7.9e-82 308.5 409 43.8
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.0e-81 308.1 406 44.1
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 2.3e-81 307.0 413 43.6
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 3.0e-81 306.6 406 43.6
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 2.6e-80 303.5 409 43.8
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 7.4e-80 302.0 406 42.1
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 1.7e-79 300.8 404 41.6
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 1.7e-79 300.8 410 44.1
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 2.8e-79 300.1 402 41.3
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 4.8e-79 299.3 405 43.5
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.4e-78 297.0 406 42.9
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 4.1e-78 296.2 396 41.2
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 4.1e-78 296.2 410 44.1
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 5.3e-78 295.8 409 42.5
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 7.0e-78 295.4 412 44.4
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 4.5e-77 292.7 406 42.6
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 7.7e-77 292.0 395 41.5
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 7.7e-77 292.0 394 41.1
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 2.2e-76 290.4 395 42.0
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 2.2e-76 290.4 406 42.4
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 3.8e-76 289.7 395 41.3
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 3.8e-76 289.7 403 42.7
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 5.0e-76 289.3 394 39.8
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 5.0e-76 289.3 410 42.0
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 6.5e-76 288.9 407 40.8
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 4.2e-75 286.2 409 42.5
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 4.7e-74 282.7 422 42.7
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 4.7e-74 282.7 407 39.3
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 1.8e-73 280.8 400 40.0
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 9.7e-72 275.0 375 42.9
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 6.3e-71 272.3 388 41.0
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 8.2e-71 271.9 323 45.5
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.4e-70 271.2 323 45.2
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 3.1e-70 270.0 415 38.3
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 3.5e-69 266.5 403 39.5
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.3e-68 264.6 374 40.1
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 5.5e-67 259.2 319 44.8
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.0e-65 255.0 407 37.1
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 3.0e-65 253.4 407 36.9
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 2.6e-64 250.4 348 43.4
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 3.4e-64 250.0 402 37.1
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.8e-63 246.9 323 43.0
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 4.5e-61 239.6 413 36.8
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 1.7e-60 237.7 404 36.4
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 6.5e-60 235.7 404 36.1
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 8.5e-60 235.3 404 36.4
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 8.5e-60 235.3 404 36.4
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.1e-59 235.0 408 35.5
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 4.2e-59 233.0 401 37.4
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 4.2e-59 233.0 404 35.9
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 8.8e-57 225.3 405 34.8
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 2.0e-56 224.2 306 39.9
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 2.4e-54 217.2 349 36.4
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 4.1e-54 216.5 349 35.8
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 2.7e-53 213.8 347 36.0
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 3.6e-50 203.4 315 41.3
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 8.9e-49 198.7 395 32.9
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 1.4e-46 191.4 352 34.7
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.3e-44 184.1 399 31.8
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 2.5e-27 127.5 252 32.1
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 2.5e-27 127.5 211 37.9
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 4.4e-16 90.1 133 36.1
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 1.1e-06 58.9 141 31.9


User provided reference genes

Program Settings