Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb156570 Zea mays HOM05D004738 ORTHO05D006439 1.2e-213 746.1 361 100.0
Os01g0682500 Oryza sativa ssp. japonica HOM05D004738 ORTHO05D006439 3.7e-181 638.3 362 85.4
Zm00001eb267390 Zea mays HOM05D004738 ORTHO05D006439 2.7e-176 622.1 365 83.8
Nn2g11846 Nelumbo nucifera HOM05D004738 ORTHO05D006439 1.5e-150 536.6 339 72.6
COL.COLO4_02957 Corchorus olitorius HOM05D004738 ORTHO05D006439 3.3e-150 535.4 337 73.0
Gohir.A02G122900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 9.7e-150 533.9 354 72.3
Dinv30535 Davidia involucrata HOM05D004738 ORTHO05D006439 2.8e-149 532.3 337 72.7
CiPaw.02G152800 Carya illinoinensis HOM05D004738 ORTHO05D006439 3.7e-149 531.9 337 73.3
Gorai.009G132100 Gossypium raimondii HOM05D004738 ORTHO05D006439 6.3e-149 531.2 358 70.7
Nn8g39296 Nelumbo nucifera HOM05D004738 ORTHO05D006439 6.3e-149 531.2 340 71.8
QL05p025470 Quercus lobata HOM05D004738 ORTHO05D006439 6.3e-149 531.2 337 72.7
Gorai.002G058000 Gossypium raimondii HOM05D004738 ORTHO05D006439 1.1e-148 530.4 354 71.8
SGA_v2.0_scaffold37G14802 Striga asiatica HOM05D004738 ORTHO05D006439 1.1e-148 530.4 354 68.9
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 1.4e-148 530.0 332 72.0
MBI01_g13569_MAGBIO Magnolia biondii HOM05D004738 ORTHO05D006439 1.8e-148 529.6 352 69.0
Glyma.15G012500 Glycine max HOM05D004738 ORTHO05D006439 2.4e-148 529.3 337 72.7
Gohir.A05G127000 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.1e-148 528.9 349 72.2
Gohir.D03G073500 Gossypium hirsutum HOM05D004738 ORTHO05D006439 3.1e-148 528.9 354 71.8
MSTRG.11096 Avicennia marina HOM05D004738 ORTHO05D006439 7.0e-148 527.7 350 70.0
Eucgr.F02574 Eucalyptus grandis HOM05D004738 ORTHO05D006439 7.0e-148 527.7 346 71.4
Lalb_Chr14g0373571 Lupinus albus HOM05D004738 ORTHO05D006439 9.1e-148 527.3 337 72.4
Solyc03g120430.3 Solanum lycopersicum HOM05D004738 ORTHO05D006439 9.1e-148 527.3 332 72.6
Sopen00g008920 Solanum pennellii HOM05D004738 ORTHO05D006439 9.1e-148 527.3 332 72.6
Sopen03g039310 Solanum pennellii HOM05D004738 ORTHO05D006439 9.1e-148 527.3 332 72.6
Glyma.13G361400 Glycine max HOM05D004738 ORTHO05D006439 1.2e-147 526.9 337 72.4
Duzib235G1168 Durio zibethinus HOM05D004738 ORTHO05D006439 1.6e-147 526.6 347 71.8
VMungo1080G0347 Vigna mungo HOM05D004738 ORTHO05D006439 3.5e-147 525.4 337 72.4
Aqoxy7G03780 Aquilegia oxysepala HOM05D004738 ORTHO05D006439 5.9e-147 524.6 337 70.0
Prupe.3G075100 Prunus persica HOM05D004738 ORTHO05D006439 5.9e-147 524.6 337 71.2
Thecc.06G081700 Theobroma cacao HOM05D004738 ORTHO05D006439 5.9e-147 524.6 337 72.1
TPR.G37250 Trifolium pratense HOM05D004738 ORTHO05D006439 5.9e-147 524.6 337 70.9
Cc04_g03640 Coffea canephora HOM05D004738 ORTHO05D006439 7.7e-147 524.2 349 69.9
Lj9A505T66 Lonicera japonica HOM05D004738 ORTHO05D006439 1.0e-146 523.9 337 71.5
vmacro16939 Vaccinium macrocarpon HOM05D004738 ORTHO05D006439 1.0e-146 523.9 337 71.8
Medtr2g102510 Medicago truncatula HOM05D004738 ORTHO05D006439 1.3e-146 523.5 340 72.4
PGSC0003DMG400002559 Solanum tuberosum HOM05D004738 ORTHO05D006439 1.7e-146 523.1 332 72.0
Carub.0002s2719 Capsella rubella HOM05D004738 ORTHO05D006439 2.9e-146 522.3 332 73.5
Actinidia08828 Actinidia chinensis HOM05D004738 ORTHO05D006439 5.0e-146 521.5 336 72.3
PSO210G3793 Papaver somniferum HOM05D004738 ORTHO05D006439 5.0e-146 521.5 355 69.3
Oeu022417.1 Olea europaea HOM05D004738 ORTHO05D006439 6.5e-146 521.2 353 69.4
arahy.Tifrunner.gnm1.ann1.2F1L5Z Arachis hypogaea HOM05D004738 ORTHO05D006439 8.5e-146 520.8 337 72.7
Sc12g0009100 Simmondsia chinensis HOM05D004738 ORTHO05D006439 8.5e-146 520.8 337 70.6
THA.LOC104808210 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.1e-145 520.4 332 71.7
CANSAT56G4214 Cannabis sativa HOM05D004738 ORTHO05D006439 1.5e-145 520.0 337 70.3
Lalb_Chr22g0351141 Lupinus albus HOM05D004738 ORTHO05D006439 1.5e-145 520.0 337 71.8
Rhsim12G0195800 Rhododendron simsii HOM05D004738 ORTHO05D006439 1.5e-145 520.0 353 69.7
FvH4_6g30840 Fragaria vesca HOM05D004738 ORTHO05D006439 1.9e-145 519.6 332 71.7
HanXRQChr02g0032631 Helianthus annuus HOM05D004738 ORTHO05D006439 1.9e-145 519.6 351 68.7
CAN.G438.45 Capsicum annuum HOM05D004738 ORTHO05D006439 2.5e-145 519.2 352 69.0
Ca_01103_v3 Cicer arietinum L. HOM05D004738 ORTHO05D006439 2.5e-145 519.2 337 70.6
GSVIVG01017163001 Vitis vinifera HOM05D004738 ORTHO05D006439 2.5e-145 519.2 353 69.7
HanXRQChr04g0096441 Helianthus annuus HOM05D004738 ORTHO05D006439 3.2e-145 518.8 337 69.1
PSO210G6241 Papaver somniferum HOM05D004738 ORTHO05D006439 3.2e-145 518.8 355 68.7
Migut.I00837 Erythranthe guttata HOM05D004738 ORTHO05D006439 4.2e-145 518.5 351 68.1
FAN02G1331 Fragaria x ananassa HOM05D004738 ORTHO05D006439 4.2e-145 518.5 332 71.4
FAN05G5687 Fragaria x ananassa HOM05D004738 ORTHO05D006439 4.2e-145 518.5 332 71.7
Potri.003G058500 Populus trichocarpa HOM05D004738 ORTHO05D006439 4.2e-145 518.5 346 69.4
CSS0005409 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 5.5e-145 518.1 352 69.6
ECA247G3808 Erigeron canadensis HOM05D004738 ORTHO05D006439 5.5e-145 518.1 337 69.7
MD17G1198400 Malus domestica HOM05D004738 ORTHO05D006439 5.5e-145 518.1 340 70.9
Ciclev10025569m.g Citrus clementina HOM05D004738 ORTHO05D006439 7.2e-145 517.7 332 70.8
AL2G41120 Arabidopsis lyrata HOM05D004738 ORTHO05D006439 9.4e-145 517.3 332 72.3
Peaxi162Scf00015g00234 Petunia axillaris HOM05D004738 ORTHO05D006439 1.6e-144 516.5 329 71.1
CDE06G1313 Ceratophyllum demersum HOM05D004738 ORTHO05D006439 2.1e-144 516.2 345 67.0
DCAR_026302 Daucus carota HOM05D004738 ORTHO05D006439 2.7e-144 515.8 340 69.1
A07p26650 Brassica napus HOM05D004738 ORTHO05D006439 3.6e-144 515.4 332 71.4
BraA07t30308Z Brassica rapa HOM05D004738 ORTHO05D006439 3.6e-144 515.4 332 71.4
BcaC08g45309 Brassica carinata HOM05D004738 ORTHO05D006439 4.7e-144 515.0 332 71.1
C06p29130 Brassica napus HOM05D004738 ORTHO05D006439 4.7e-144 515.0 332 71.1
BolC6t38077H Brassica oleracea HOM05D004738 ORTHO05D006439 4.7e-144 515.0 332 71.1
Phvul.005G173200 Phaseolus vulgaris HOM05D004738 ORTHO05D006439 4.7e-144 515.0 337 70.0
Nitab4.5_0005784g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 6.1e-144 514.6 332 70.5
Haze_16464 Corylus avellana HOM05D004738 ORTHO05D006439 1.0e-143 513.8 356 68.3
Cpa.g.sc10.174 Carica papaya HOM05D004738 ORTHO05D006439 1.8e-143 513.1 332 69.9
RcHm_v2.0_Chr2g0137281 Rosa chinensis HOM05D004738 ORTHO05D006439 3.0e-143 512.3 352 68.2
arahy.Tifrunner.gnm1.ann1.S5ELWT Arachis hypogaea HOM05D004738 ORTHO05D006439 4.0e-143 511.9 351 69.8
Lsat_1_v5_gn_1_34140 Lactuca sativa HOM05D004738 ORTHO05D006439 5.2e-143 511.5 341 70.1
Lj3g0001201 Lotus japonicus HOM05D004738 ORTHO05D006439 5.2e-143 511.5 346 68.8
Manes.04G120700 Manihot esculenta HOM05D004738 ORTHO05D006439 6.7e-143 511.1 337 69.1
Cfa002046 Carpinus fangiana HOM05D004738 ORTHO05D006439 8.8e-143 510.8 332 72.3
AUR62011604 Chenopodium quinoa HOM05D004738 ORTHO05D006439 8.8e-143 510.8 332 68.4
Aa31LG4G650 Aethionema arabicum HOM05D004738 ORTHO05D006439 1.1e-142 510.4 348 67.8
Sp5g35430 Schrenkiella parvula HOM05D004738 ORTHO05D006439 1.1e-142 510.4 332 70.5
ATR0083G024 Amborella trichopoda HOM05D004738 ORTHO05D006439 1.5e-142 510.0 337 70.0
AUR62016418 Chenopodium quinoa HOM05D004738 ORTHO05D006439 1.5e-142 510.0 343 67.3
FAN14G4632 Fragaria x ananassa HOM05D004738 ORTHO05D006439 1.5e-142 510.0 344 69.2
PGR102G2550 Punica granatum HOM05D004738 ORTHO05D006439 1.5e-142 510.0 337 69.1
TWI12G0818 Tripterygium wilfordii HOM05D004738 ORTHO05D006439 1.5e-142 510.0 351 68.4
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 2.0e-142 509.6 342 69.0
EL10Ac9g21974 Beta vulgaris HOM05D004738 ORTHO05D006439 2.0e-142 509.6 333 70.0
FAN09G3531 Fragaria x ananassa HOM05D004738 ORTHO05D006439 2.0e-142 509.6 334 70.7
Lj3g0008822 Lotus japonicus HOM05D004738 ORTHO05D006439 2.6e-142 509.2 332 72.0
Sabra03G0032700 Salix brachista HOM05D004738 ORTHO05D006439 2.6e-142 509.2 337 68.5
Thhalv10018540m.g Eutrema salsugineum HOM05D004738 ORTHO05D006439 3.3e-142 508.8 332 71.1
BcaB02g07276 Brassica carinata HOM05D004738 ORTHO05D006439 5.7e-142 508.1 332 69.9
CARHR074130 Cardamine hirsuta HOM05D004738 ORTHO05D006439 5.7e-142 508.1 332 71.1
THA.LOC104812476 Tarenaya hassleriana HOM05D004738 ORTHO05D006439 1.7e-141 506.5 358 66.2
CsaV3_7G032950 Cucumis sativus L. HOM05D004738 ORTHO05D006439 2.8e-141 505.8 337 68.2
BcaC08g47585 Brassica carinata HOM05D004738 ORTHO05D006439 3.7e-141 505.4 332 69.9
BraA07t32032Z Brassica rapa HOM05D004738 ORTHO05D006439 4.8e-141 505.0 332 69.9
C06p54140 Brassica napus HOM05D004738 ORTHO05D006439 8.2e-141 504.2 332 69.6
Hund06597 Selenicereus undatus HOM05D004738 ORTHO05D006439 8.2e-141 504.2 342 67.0
Nitab4.5_0002424g0040 Nicotiana tabacum HOM05D004738 ORTHO05D006439 1.1e-140 503.8 353 66.0
MELO3C023371.2 Cucumis melo HOM05D004738 ORTHO05D006439 1.8e-140 503.1 339 68.7
A07p45280 Brassica napus HOM05D004738 ORTHO05D006439 5.3e-140 501.5 332 69.6
BcaB05g25272 Brassica carinata HOM05D004738 ORTHO05D006439 1.6e-139 500.0 332 69.0
C02p37360 Brassica napus HOM05D004738 ORTHO05D006439 1.6e-139 500.0 332 69.3
BolC2t09746H Brassica oleracea HOM05D004738 ORTHO05D006439 2.7e-139 499.2 332 69.6
BcaB02g08689 Brassica carinata HOM05D004738 ORTHO05D006439 1.0e-138 497.3 351 67.0
A02p23600 Brassica napus HOM05D004738 ORTHO05D006439 1.3e-138 496.9 332 69.0
Gohir.D05G127900 Gossypium hirsutum HOM05D004738 ORTHO05D006439 1.3e-138 496.9 315 74.0
BraA02t07352Z Brassica rapa HOM05D004738 ORTHO05D006439 1.7e-138 496.5 332 69.0
Potri.001G177300 Populus trichocarpa HOM05D004738 ORTHO05D006439 5.5e-137 491.5 351 65.8
BolC6t40426H Brassica oleracea HOM05D004738 ORTHO05D006439 1.6e-136 490.0 363 63.9
Sed0002572 Sechium edule HOM05D004738 ORTHO05D006439 2.1e-136 489.6 329 68.1
ClCG09G002360 Citrullus lanatus HOM05D004738 ORTHO05D006439 1.5e-134 483.4 371 63.3
CSS0037007 Camellia sinensis var. sinensis HOM05D004738 ORTHO05D006439 5.0e-130 468.4 352 63.6
Pp3c18_16070 Physcomitrium patens HOM05D004738 ORTHO05D006439 7.5e-126 454.5 346 60.1
Duzib192G0909 Durio zibethinus HOM05D004738 ORTHO05D006439 9.8e-126 454.1 294 71.4
Nn2g11397 Nelumbo nucifera HOM05D004738 ORTHO05D006439 6.3e-125 451.4 340 62.6
SEGI_20298 Sequoiadendron giganteum HOM05D004738 ORTHO05D006439 1.1e-124 450.7 331 63.7
HPP92_011481 Vanilla planifolia HOM05D004738 ORTHO05D006439 9.2e-124 447.6 346 63.3
AagrBONN_evm.TU.Sc2ySwM_368.190 Anthoceros agrestis HOM05D004738 ORTHO05D006439 2.2e-117 426.4 331 60.4
Mapoly0010s0209 Marchantia polymorpha HOM05D004738 ORTHO05D006439 9.2e-116 421.0 330 57.9
HPP92_011544 Vanilla planifolia HOM05D004738 ORTHO05D006439 2.0e-115 419.9 315 63.5
AT1G80380 Arabidopsis thaliana HOM05D004738 ORTHO05D006439 2.7e-115 419.5 272 69.9
unitig_21.g20511 Utricularia gibba HOM05D004738 ORTHO05D006439 3.5e-115 419.1 337 61.1
SMO147G0425 Selaginella moellendorffii HOM05D004738 ORTHO05D006439 1.2e-112 410.6 330 56.7
SHI09688 Sapria himalayana HOM05D004738 ORTHO05D006439 1.6e-112 410.2 348 57.8
Oeu033460.1 Olea europaea HOM05D004738 ORTHO05D006439 2.3e-111 406.4 310 63.2
BcaC03g15976 Brassica carinata HOM05D004738 ORTHO05D006439 9.5e-105 384.4 242 75.2
CBR_g49861 Chara braunii HOM05D004738 ORTHO05D006439 8.9e-103 377.9 349 50.1
Psat5g299520 Pisum sativum HOM05D004738 ORTHO05D006439 3.2e-100 369.4 244 70.5
Cre12.g542300 Chlamydomonas reinhardtii HOM05D004738 ORTHO05D006439 7.1e-92 341.7 354 47.7
MCO11G539 Micromonas commoda HOM05D004738 ORTHO05D006439 1.3e-82 310.8 342 45.0
PRCOL_00005044 Prasinoderma coloniale HOM05D004738 ORTHO05D006439 9.6e-73 278.1 327 45.6
arahy.Tifrunner.gnm1.ann1.7R7SHJ Arachis hypogaea HOM05D004738 ORTHO05D006439 9.0e-71 271.6 246 54.9
arahy.Tifrunner.gnm1.ann1.1FY4ZR Arachis hypogaea HOM05D004738 ORTHO05D007023 4.3e-65 252.7 238 54.6
Dinv38066 Davidia involucrata HOM05D004738 ORTHO05D006439 1.4e-60 237.7 149 76.5
Hund00584 Selenicereus undatus HOM05D004738 ORTHO05D006439 6.9e-55 218.8 144 71.5
arahy.Tifrunner.gnm1.ann1.CI84PE Arachis hypogaea HOM05D004738 ORTHO05D006439 7.7e-38 162.2 156 52.6
TAR636G0147 Trochodendron aralioides HOM05D004738 ORTHO05D051490 2.2e-37 160.6 164 45.7
TAR636G3653 Trochodendron aralioides HOM05D004738 ORTHO05D051490 1.1e-36 158.3 164 45.1
Nn4g26563 Nelumbo nucifera HOM05D004738 ORTHO05D006439 8.8e-34 148.7 126 59.5
arahy.Tifrunner.gnm1.ann1.9N81UM Arachis hypogaea HOM05D005815 ORTHO05D007023 3.7e-32 143.3 283 34.3
Dinv38065 Davidia involucrata HOM05D004738 ORTHO05D006439 4.8e-32 142.9 78 84.6
Ah.09g223940 Amaranthus hybridus HOM05D004738 ORTHO05D001643 5.7e-25 119.4 95 63.2
Sabra01G0149000 Salix brachista HOM05D004738 ORTHO05D006439 6.3e-24 115.9 75 65.3
arahy.Tifrunner.gnm1.ann1.GN5QKJ Arachis hypogaea HOM05D005815 ORTHO05D007023 6.5e-21 105.9 61 78.7
Nn1g05393 Nelumbo nucifera HOM05D004738 ORTHO05D280673 4.4e-17 93.2 82 53.7
Pp3c21_6430 Physcomitrium patens HOM05D004738 ORTHO05D314778 2.7e-06 57.4 52 42.3


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