Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb145910 Zea mays HOM05D000316 ORTHO05D443279 6.8e-85 317.4 173 100.0
Zm00001eb366340 Zea mays HOM05D000316 ORTHO05D000374 4.3e-39 165.2 115 85.2
Os01g0877400 Oryza sativa ssp. japonica HOM05D000316 ORTHO05D000374 2.5e-26 122.9 122 66.4
Os05g0427200 Oryza sativa ssp. japonica HOM05D000316 ORTHO05D000374 9.1e-21 104.4 119 56.3
HPP92_002039 Vanilla planifolia HOM05D000316 ORTHO05D000374 3.1e-13 79.3 120 43.3
Peaxi162Scf00078g01132 Petunia axillaris HOM05D000316 ORTHO05D000374 2.9e-11 72.8 104 43.3
Nitab4.5_0001710g0030 Nicotiana tabacum HOM05D000316 ORTHO05D000374 1.9e-10 70.1 106 41.5
Nitab4.5_0000079g0050 Nicotiana tabacum HOM05D000316 ORTHO05D000374 7.2e-10 68.2 106 41.5
Migut.C01407 Erythranthe guttata HOM05D000316 ORTHO05D000374 2.7e-09 66.2 104 41.3
vmacro00918 Vaccinium macrocarpon HOM05D000316 ORTHO05D000374 2.7e-09 66.2 100 40.0
Actinidia01537 Actinidia chinensis HOM05D000316 ORTHO05D000374 3.6e-09 65.9 113 40.7
Solyc11g042810.2 Solanum lycopersicum HOM05D000316 ORTHO05D000374 3.6e-09 65.9 110 40.9
Sopen11g019210 Solanum pennellii HOM05D000316 ORTHO05D000374 3.6e-09 65.9 110 40.9
PGSC0003DMG400032800 Solanum tuberosum HOM05D000316 ORTHO05D000374 3.6e-09 65.9 112 37.5
MBI06_g16619_MAGBIO Magnolia biondii HOM05D000316 ORTHO05D000374 6.1e-09 65.1 110 40.9
CAN.G621.3 Capsicum annuum HOM05D000316 ORTHO05D000374 8.0e-09 64.7 106 36.8
QL09p001122 Quercus lobata HOM05D000316 ORTHO05D000374 8.0e-09 64.7 105 41.9
Sed0023430 Sechium edule HOM05D000316 ORTHO05D000374 1.0e-08 64.3 93 39.8
Lj3g0010879 Lotus japonicus HOM05D000316 ORTHO05D000374 1.4e-08 63.9 101 42.6
Nn5g27188 Nelumbo nucifera HOM05D000316 ORTHO05D000374 1.4e-08 63.9 144 36.8
Rhsim12G0001100 Rhododendron simsii HOM05D000316 ORTHO05D000374 1.8e-08 63.5 100 42.0
ATR1089G088 Amborella trichopoda HOM05D000316 ORTHO05D000374 3.0e-08 62.8 114 42.1
Dinv22065 Davidia involucrata HOM05D000316 ORTHO05D000374 4.0e-08 62.4 106 42.5
Aqoxy6G00023 Aquilegia oxysepala HOM05D000316 ORTHO05D000374 6.8e-08 61.6 102 42.2
Hma1.2p1_0016F.1_g011080 Hydrangea macrophylla HOM05D000316 ORTHO05D000374 8.8e-08 61.2 98 39.8
AUR62013401 Chenopodium quinoa HOM05D000316 ORTHO05D000374 2.0e-07 60.1 123 39.8
arahy.Tifrunner.gnm1.ann1.ZW4616 Arachis hypogaea HOM05D000316 ORTHO05D000374 2.6e-07 59.7 97 44.3
Gohir.A08G231100 Gossypium hirsutum HOM05D000316 ORTHO05D000374 3.4e-07 59.3 115 39.1
Gohir.D08G251500 Gossypium hirsutum HOM05D000316 ORTHO05D000374 3.4e-07 59.3 118 39.0
Gorai.004G268200 Gossypium raimondii HOM05D000316 ORTHO05D000374 3.4e-07 59.3 118 39.0
PSO170G3996 Papaver somniferum HOM05D000316 ORTHO05D000374 3.4e-07 59.3 124 35.5
Phvul.011G003800 Phaseolus vulgaris HOM05D000316 ORTHO05D000374 3.4e-07 59.3 99 40.4
Glyma.09G233700 Glycine max HOM05D000316 ORTHO05D000374 4.4e-07 58.9 91 41.8
Cc10_g16180 Coffea canephora HOM05D000316 ORTHO05D000374 5.7e-07 58.5 109 40.4
GSVIVG01037121001 Vitis vinifera HOM05D000316 ORTHO05D000374 5.7e-07 58.5 103 43.7
ATR0794G045 Amborella trichopoda HOM05D000316 ORTHO05D000374 7.5e-07 58.2 108 41.7
arahy.Tifrunner.gnm1.ann1.U0T1IZ Arachis hypogaea HOM05D000316 ORTHO05D000374 1.3e-06 57.4 102 41.2
Lsat_1_v5_gn_5_178681 Lactuca sativa HOM05D000316 ORTHO05D000374 1.3e-06 57.4 101 40.6
CiPaw.03G011800 Carya illinoinensis HOM05D000316 ORTHO05D000374 1.7e-06 57.0 45 66.7
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 1.7e-06 57.0 44 68.2
HanXRQChr16g0506451 Helianthus annuus HOM05D000316 ORTHO05D000374 1.7e-06 57.0 96 38.5
Lalb_Chr19g0140421 Lupinus albus HOM05D000316 ORTHO05D000374 2.2e-06 56.6 99 38.4
PSO017G2833 Papaver somniferum HOM05D000316 ORTHO05D000374 2.2e-06 56.6 108 35.2
Cfa021492 Carpinus fangiana HOM05D000316 ORTHO05D000374 2.8e-06 56.2 105 40.0
Duzib116G0192 Durio zibethinus HOM05D000316 ORTHO05D000374 2.8e-06 56.2 115 34.8
Glyma.12G003100 Glycine max HOM05D000316 ORTHO05D000374 2.8e-06 56.2 91 39.6
MBI03_g11132_MAGBIO Magnolia biondii HOM05D000316 ORTHO05D000374 3.7e-06 55.8 51 58.8
MD10G1001400 Malus domestica HOM05D000316 ORTHO05D000374 3.7e-06 55.8 111 36.9
PSO675G6180 Papaver somniferum HOM05D000316 ORTHO05D000374 3.7e-06 55.8 96 38.5
ClCG08G001850 Citrullus lanatus HOM05D000316 ORTHO05D000374 4.9e-06 55.5 93 37.6
MELO3C025365.2 Cucumis melo HOM05D000316 ORTHO05D000374 4.9e-06 55.5 108 38.9
Nn5g27943 Nelumbo nucifera HOM05D000316 ORTHO05D000374 4.9e-06 55.5 103 36.9
SEGI_07044 Sequoiadendron giganteum HOM05D000316 ORTHO05D000374 4.9e-06 55.5 113 37.2
VMungo1127G0388 Vigna mungo HOM05D000316 ORTHO05D000374 4.9e-06 55.5 91 39.6
Potri.019G067300 Populus trichocarpa HOM05D000316 ORTHO05D000374 6.3e-06 55.1 106 37.7
Manes.14G003800 Manihot esculenta HOM05D000316 ORTHO05D000374 8.3e-06 54.7 110 33.6
Thecc.08G166300 Theobroma cacao HOM05D000316 ORTHO05D000374 8.3e-06 54.7 125 37.6


User provided reference genes

Program Settings