Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb142180 Zea mays HOM05D002567 ORTHO05D006538 0.0e+00 1996.1 1167 100.0
Prupe.8G255600 Prunus persica HOM05D002567 ORTHO05D006538 2.0e-143 514.6 975 39.3
MD11G1302000 Malus domestica HOM05D002567 ORTHO05D006538 2.4e-141 507.7 775 43.5
MD03G1284300 Malus domestica HOM05D002567 ORTHO05D006538 3.1e-141 507.3 783 43.6
MBI19_g12821_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 7.0e-141 506.1 778 42.4
HPP92_025217 Vanilla planifolia HOM05D002567 ORTHO05D006538 1.2e-140 505.4 752 44.9
TAR362G0158 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.0e-139 502.3 793 44.4
Nn3g21405 Nelumbo nucifera HOM05D002567 ORTHO05D006538 3.8e-139 500.4 754 43.6
QL12p030584 Quercus lobata HOM05D002567 ORTHO05D006538 5.6e-138 496.5 764 43.7
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 2.8e-137 494.2 856 41.1
Duzib138G0932 Durio zibethinus HOM05D002567 ORTHO05D006538 4.7e-137 493.4 835 41.7
CiPaw.07G103600 Carya illinoinensis HOM05D002567 ORTHO05D006538 1.5e-135 488.4 1041 38.1
GSVIVG01010967001 Vitis vinifera HOM05D002567 ORTHO05D006538 2.6e-135 487.6 802 42.5
Aqoxy5G00702 Aquilegia oxysepala HOM05D002567 ORTHO05D006538 5.7e-135 486.5 816 41.3
Thecc.01G293900 Theobroma cacao HOM05D002567 ORTHO05D006538 1.3e-134 485.3 777 43.0
Lj1g0027200 Lotus japonicus HOM05D002567 ORTHO05D006538 1.7e-134 485.0 769 42.9
Gorai.004G088100 Gossypium raimondii HOM05D002567 ORTHO05D006538 1.4e-133 481.9 770 43.8
CANSAT25G2282 Cannabis sativa HOM05D002567 ORTHO05D006538 7.0e-133 479.6 760 42.9
CsaV3_7G028930 Cucumis sativus L. HOM05D002567 ORTHO05D006538 7.0e-133 479.6 764 44.2
Lalb_Chr15g0078671 Lupinus albus HOM05D002567 ORTHO05D006538 7.0e-133 479.6 783 42.0
Gohir.D08G083700 Gossypium hirsutum HOM05D002567 ORTHO05D006538 9.2e-133 479.2 763 43.6
Cc01_g20510 Coffea canephora HOM05D002567 ORTHO05D006538 2.0e-132 478.0 774 41.9
Gohir.A08G074400 Gossypium hirsutum HOM05D002567 ORTHO05D006538 2.0e-132 478.0 764 43.5
Nn5g30059 Nelumbo nucifera HOM05D002567 ORTHO05D006538 2.0e-132 478.0 929 38.8
Dinv33021 Davidia involucrata HOM05D002567 ORTHO05D006538 7.8e-132 476.1 786 42.0
Cpa.g.sc9.189 Carica papaya HOM05D002567 ORTHO05D006538 2.3e-131 474.6 1068 37.5
MELO3C016045.2 Cucumis melo HOM05D002567 ORTHO05D006538 1.5e-130 471.9 909 39.9
Glyma.03G211500 Glycine max HOM05D002567 ORTHO05D006538 1.9e-130 471.5 786 41.5
ClCG09G006200 Citrullus lanatus HOM05D002567 ORTHO05D006538 2.5e-130 471.1 784 43.2
Glyma.19G208700 Glycine max HOM05D002567 ORTHO05D006538 7.3e-130 469.5 787 40.9
THA.LOC104815934 Tarenaya hassleriana HOM05D002567 ORTHO05D006538 1.6e-129 468.4 785 41.3
PGR119G0460 Punica granatum HOM05D002567 ORTHO05D006538 1.4e-128 465.3 747 41.2
TWI14G0289 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 8.9e-128 462.6 813 39.5
Atru.chr5.1232 Acer truncatum HOM05D002567 ORTHO05D006538 2.0e-127 461.5 790 43.2
Sed0021907 Sechium edule HOM05D002567 ORTHO05D006538 2.0e-127 461.5 781 42.5
FvH4_2g25100 Fragaria vesca HOM05D002567 ORTHO05D006538 2.2e-126 458.0 929 38.4
CAN.G1562.7 Capsicum annuum HOM05D002567 ORTHO05D006538 3.7e-126 457.2 755 40.9
Ca_09134_v3 Cicer arietinum L. HOM05D002567 ORTHO05D006538 4.9e-126 456.8 784 40.8
Phvul.001G204600 Phaseolus vulgaris HOM05D002567 ORTHO05D006538 4.9e-126 456.8 783 40.5
Sc17g0003440 Simmondsia chinensis HOM05D002567 ORTHO05D006538 4.9e-126 456.8 749 41.1
VMungo1383G1965 Vigna mungo HOM05D002567 ORTHO05D006538 1.1e-125 455.7 774 41.2
CARHR250850 Cardamine hirsuta HOM05D002567 ORTHO05D006538 1.9e-125 454.9 768 40.0
FAN24G0094 Fragaria x ananassa HOM05D002567 ORTHO05D006538 4.1e-125 453.8 917 38.4
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 2.0e-124 451.4 931 37.5
TPR.G9283 Trifolium pratense HOM05D002567 ORTHO05D006538 2.0e-124 451.4 824 39.9
Potri.002G209216 Populus trichocarpa HOM05D002567 ORTHO05D006538 1.0e-123 449.1 810 41.4
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 1.3e-123 448.7 756 41.0
CDE11G0231 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 2.3e-123 448.0 673 44.0
HanXRQChr04g0118111 Helianthus annuus HOM05D002567 ORTHO05D006538 3.9e-123 447.2 769 40.1
PSO832G4557 Papaver somniferum HOM05D002567 ORTHO05D006538 5.0e-123 446.8 1092 35.1
Medtr7g108390 Medicago truncatula HOM05D002567 ORTHO05D006538 8.6e-123 446.0 780 40.3
Carub.0006s3458 Capsella rubella HOM05D002567 ORTHO05D006538 1.1e-122 445.7 786 39.6
arahy.Tifrunner.gnm1.ann1.B3NEVG Arachis hypogaea HOM05D002567 ORTHO05D006538 2.5e-122 444.5 770 41.6
AT4G02560 Arabidopsis thaliana HOM05D002567 ORTHO05D006538 4.3e-122 443.7 823 37.8
Sopen09g029570 Solanum pennellii HOM05D002567 ORTHO05D006538 4.3e-122 443.7 764 39.8
ATR0706G272 Amborella trichopoda HOM05D002567 ORTHO05D006538 1.6e-121 441.8 786 40.1
PSO210G0804 Papaver somniferum HOM05D002567 ORTHO05D006538 2.8e-121 441.0 1091 34.9
Sabra02G0150900 Salix brachista HOM05D002567 ORTHO05D006538 3.6e-121 440.7 818 41.2
DCAR_018344 Daucus carota HOM05D002567 ORTHO05D006538 4.7e-121 440.3 754 40.6
RcHm_v2.0_Chr6g0293161 Rosa chinensis HOM05D002567 ORTHO05D006538 4.7e-121 440.3 1111 35.2
Potri.014G132800 Populus trichocarpa HOM05D002567 ORTHO05D006538 1.4e-120 438.7 811 39.8
AUR62033197 Chenopodium quinoa HOM05D002567 ORTHO05D006538 4.0e-120 437.2 739 41.8
EL10Ac7g17517 Beta vulgaris HOM05D002567 ORTHO05D006538 5.2e-120 436.8 740 40.9
AL6G50490 Arabidopsis lyrata HOM05D002567 ORTHO05D006538 1.5e-119 435.3 811 38.1
ECA236G0908 Erigeron canadensis HOM05D002567 ORTHO05D006538 1.5e-119 435.3 832 38.5
Lsat_1_v5_gn_8_54500 Lactuca sativa HOM05D002567 ORTHO05D006538 1.5e-119 435.3 785 39.0
TWI59G0117 Tripterygium wilfordii HOM05D002567 ORTHO05D006538 2.6e-119 434.5 794 39.4
Dinv19733 Davidia involucrata HOM05D002567 ORTHO05D006538 9.8e-119 432.6 679 42.9
BcaB05g23644 Brassica carinata HOM05D002567 ORTHO05D006538 2.2e-118 431.4 820 37.3
BcaC03g16147 Brassica carinata HOM05D002567 ORTHO05D006538 2.9e-118 431.0 820 37.3
C02p39290 Brassica napus HOM05D002567 ORTHO05D006538 7.1e-117 426.4 826 36.8
BolC2t09940H Brassica oleracea HOM05D002567 ORTHO05D006538 7.1e-117 426.4 826 36.8
A02p24870 Brassica napus HOM05D002567 ORTHO05D006538 9.2e-117 426.0 826 36.8
BraA02t07474Z Brassica rapa HOM05D002567 ORTHO05D006538 9.2e-117 426.0 826 36.8
Sp6g02470 Schrenkiella parvula HOM05D002567 ORTHO05D006538 3.5e-116 424.1 798 37.3
arahy.Tifrunner.gnm1.ann1.VDB3CB Arachis hypogaea HOM05D001550 ORTHO05D001611 1.7e-115 421.8 761 40.6
FAN20G1419 Fragaria x ananassa HOM05D002567 ORTHO05D006538 1.9e-114 418.3 892 38.0
Ciclev10018617m.g Citrus clementina HOM05D002567 ORTHO05D006538 2.5e-114 417.9 1094 34.2
Os01g0934300 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D006538 2.1e-113 414.8 375 68.3
Sopen09g029590 Solanum pennellii HOM05D002567 ORTHO05D006538 1.2e-111 409.1 864 35.4
Aa31LG5G2190 Aethionema arabicum HOM05D002567 ORTHO05D006538 2.9e-110 404.4 832 36.7
FAN27G3038 Fragaria x ananassa HOM05D002567 ORTHO05D006538 4.9e-110 403.7 774 39.0
Thhalv10028403m.g Eutrema salsugineum HOM05D002567 ORTHO05D006538 6.4e-110 403.3 777 38.0
Hund18109 Selenicereus undatus HOM05D002567 ORTHO05D006538 5.4e-109 400.2 771 39.3
Migut.D00183 Erythranthe guttata HOM05D002567 ORTHO05D006538 1.2e-108 399.1 781 37.5
vmacro02487 Vaccinium macrocarpon HOM05D002567 ORTHO05D006538 2.7e-108 397.9 742 40.8
FAN15G0803 Fragaria x ananassa HOM05D002567 ORTHO05D006538 6.0e-108 396.7 878 36.2
AUR62043270 Chenopodium quinoa HOM05D002567 ORTHO05D006538 3.9e-107 394.0 780 37.8
CDE05G3083 Ceratophyllum demersum HOM05D002567 ORTHO05D006538 3.3e-106 391.0 817 37.7
Oeu046708.2 Olea europaea HOM05D002567 ORTHO05D006538 1.1e-104 386.0 837 36.6
Rhsim13G0015100 Rhododendron simsii HOM05D002567 ORTHO05D006538 2.2e-102 378.3 818 38.5
Solyc09g074730.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 2.1e-100 371.7 750 37.2
arahy.Tifrunner.gnm1.ann1.8D3299 Arachis hypogaea HOM05D002567 ORTHO05D006538 6.0e-100 370.2 737 38.4
Psat3g022840 Pisum sativum HOM05D002567 ORTHO05D006538 3.9e-99 367.5 696 38.4
Lj2C1188T12 Lonicera japonica HOM05D002567 ORTHO05D006538 3.4e-95 354.4 598 43.0
MBI19_g13122_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 9.3e-93 346.3 687 38.3
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 2.3e-91 341.7 857 33.6
Lalb_Chr18g0047271 Lupinus albus HOM05D002567 ORTHO05D006538 7.4e-90 336.7 624 39.7
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 8.1e-89 333.2 1051 31.1
TAR633G1653 Trochodendron aralioides HOM05D002567 ORTHO05D006538 5.8e-87 327.0 441 48.3
Eucgr.H01191 Eucalyptus grandis HOM05D002567 ORTHO05D006538 3.1e-80 304.7 747 33.9
SGA_v2.0_scaffold2G01415 Striga asiatica HOM05D001550 ORTHO05D006538 3.1e-80 304.7 494 42.7
Sabra14G0099200 Salix brachista HOM05D002567 ORTHO05D006538 5.5e-77 293.9 841 34.4
unitig_26.g10168 Utricularia gibba HOM05D002567 ORTHO05D006538 1.2e-76 292.7 773 33.2
Peaxi162Scf00067g01812 Petunia axillaris HOM05D002567 ORTHO05D006538 3.6e-68 264.6 502 39.0
Solyc09g074690.3 Solanum lycopersicum HOM05D002567 ORTHO05D006538 7.9e-60 236.9 344 44.8
Actinidia28538 Actinidia chinensis HOM05D002567 ORTHO05D006538 2.8e-57 228.4 338 49.4
Manes.05G065900 Manihot esculenta HOM05D002567 ORTHO05D006538 7.0e-48 197.2 389 35.0
Actinidia32249 Actinidia chinensis HOM05D002567 ORTHO05D006538 8.0e-44 183.7 386 39.6
Eucgr.H01192 Eucalyptus grandis HOM05D002567 ORTHO05D006538 4.8e-41 174.5 134 67.2
Actinidia28539 Actinidia chinensis HOM05D002567 ORTHO05D006538 6.5e-38 164.1 343 37.9
Oeu011428.1 Olea europaea HOM05D002567 ORTHO05D006538 8.8e-35 153.7 171 53.2
Lalb_Chr18g0047261 Lupinus albus HOM05D002567 ORTHO05D006538 9.1e-32 143.7 156 50.6
Mapoly0032s0010 Marchantia polymorpha HOM05D002567 ORTHO05D006538 2.1e-28 132.5 633 25.1
Lj2A1188T56 Lonicera japonica HOM05D002567 ORTHO05D006538 6.8e-27 127.5 155 43.9
Solyc09g074710.2 Solanum lycopersicum HOM05D002567 ORTHO05D006538 4.4e-26 124.8 163 43.6
Peaxi162Scf00067g01813 Petunia axillaris HOM05D002567 ORTHO05D006538 1.3e-25 123.2 167 42.5
Pp3c7_5840 Physcomitrium patens HOM05D002567 ORTHO05D006538 6.1e-20 104.4 1088 20.6
Actinidia00673 Actinidia chinensis HOM05D002567 ORTHO05D006538 8.9e-19 100.5 123 45.5
MBI01_g23938_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 1.2e-18 100.1 75 65.3
Psat0s3384g0160 Pisum sativum HOM05D002567 ORTHO05D006538 4.9e-17 94.7 136 44.9
TAR399G0002 Trochodendron aralioides HOM05D002567 ORTHO05D006538 1.4e-16 93.2 68 63.2
Actinidia02761 Actinidia chinensis HOM05D002567 ORTHO05D006538 9.2e-16 90.5 202 36.6
MBI05_g31851_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 4.6e-15 88.2 81 58.0
Actinidia02760 Actinidia chinensis HOM05D002567 ORTHO05D006538 3.0e-14 85.5 51 78.4
MBI02_g41934_MAGBIO Magnolia biondii HOM05D002567 ORTHO05D006538 8.6e-14 84.0 52 75.0
Mapoly0030s0133 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.2e-12 80.1 208 29.8
Mapoly0055s0074 Marchantia polymorpha HOM05D002567 ORTHO05D006538 6.2e-12 77.8 74 44.6
SMO119G0396 Selaginella moellendorffii HOM05D002567 ORTHO05D006538 6.2e-12 77.8 289 25.3
CBR_g48346 Chara braunii HOM05D002567 ORTHO05D006538 3.1e-11 75.5 475 25.3
BcaC04g23997 Brassica carinata HOM05D002567 ORTHO05D006538 6.8e-11 74.3 76 44.7
Mapoly0004s0277 Marchantia polymorpha HOM05D002567 ORTHO05D006538 1.5e-10 73.2 288 27.8
CBR_g48344 Chara braunii HOM05D002567 ORTHO05D006538 1.3e-09 70.1 182 31.9
Nn5g29271 Nelumbo nucifera HOM05D002848 ORTHO05D003043 3.7e-09 68.6 162 30.2
A08p29640 Brassica napus HOM05D002848 ORTHO05D003043 8.3e-09 67.4 200 31.0
ECA233G1527 Erigeron canadensis HOM05D002848 ORTHO05D003043 1.4e-08 66.6 166 30.7
PSO675G8906 Papaver somniferum HOM05D002848 ORTHO05D003043 1.4e-08 66.6 211 27.0
BcaC07g39005 Brassica carinata HOM05D002848 ORTHO05D003043 1.9e-08 66.2 208 31.2
C08p19770 Brassica napus HOM05D002848 ORTHO05D003043 1.9e-08 66.2 208 31.2
BolC8t49614H Brassica oleracea HOM05D002848 ORTHO05D003043 1.9e-08 66.2 208 31.2
BcaC05g25878 Brassica carinata HOM05D002848 ORTHO05D003043 2.4e-08 65.9 187 31.6
BolC5t30542H Brassica oleracea HOM05D002848 ORTHO05D003043 2.4e-08 65.9 187 31.6
BraA08t34900Z Brassica rapa HOM05D002848 ORTHO05D003043 2.4e-08 65.9 199 29.1
AL1G32590 Arabidopsis lyrata HOM05D002848 ORTHO05D003043 4.1e-08 65.1 215 30.7
AT1G19860 Arabidopsis thaliana HOM05D002848 ORTHO05D003043 4.1e-08 65.1 215 29.3
BcaB07g32004 Brassica carinata HOM05D002848 ORTHO05D003043 4.1e-08 65.1 182 29.7
Carub.0001s1938 Capsella rubella HOM05D002848 ORTHO05D003043 5.4e-08 64.7 168 30.4
AUR62035722 Chenopodium quinoa HOM05D002848 ORTHO05D003043 5.4e-08 64.7 142 31.0
C05p18320 Brassica napus HOM05D002848 ORTHO05D003043 7.0e-08 64.3 187 31.6
TAR381G0737 Trochodendron aralioides HOM05D002848 ORTHO05D003043 7.0e-08 64.3 97 40.2
PSO541G4561 Papaver somniferum HOM05D002848 ORTHO05D003043 9.2e-08 63.9 187 27.3
Sp1g17660 Schrenkiella parvula HOM05D002848 ORTHO05D003043 9.2e-08 63.9 213 28.6
HanXRQChr12g0367651 Helianthus annuus HOM05D002848 ORTHO05D003043 1.2e-07 63.5 162 30.9
Gohir.A02G088501 Gossypium hirsutum HOM05D002848 ORTHO05D003043 1.6e-07 63.2 187 27.8
Gohir.D02G097800 Gossypium hirsutum HOM05D002848 ORTHO05D003043 1.6e-07 63.2 187 27.8
Gorai.005G111400 Gossypium raimondii HOM05D002848 ORTHO05D003043 1.6e-07 63.2 187 27.8
BcaB03g12895 Brassica carinata HOM05D002848 ORTHO05D003043 2.0e-07 62.8 198 28.3
Thhalv10007764m.g Eutrema salsugineum HOM05D002848 ORTHO05D003043 2.7e-07 62.4 216 30.6
Gorai.010G005700 Gossypium raimondii HOM05D002848 ORTHO05D003043 2.7e-07 62.4 143 30.1
Sc02g0008430 Simmondsia chinensis HOM05D002848 ORTHO05D003043 2.7e-07 62.4 165 29.7
Ah.11g039460 Amaranthus hybridus HOM05D002848 ORTHO05D003043 3.5e-07 62.0 139 32.4
CARHR020360 Cardamine hirsuta HOM05D002848 ORTHO05D003043 3.5e-07 62.0 213 29.6
AUR62035435 Chenopodium quinoa HOM05D002848 ORTHO05D003043 3.5e-07 62.0 148 29.7
Gohir.D06G001300 Gossypium hirsutum HOM05D002848 ORTHO05D003043 3.5e-07 62.0 143 30.1
Oeu007349.2 Olea europaea HOM05D002848 ORTHO05D003043 3.5e-07 62.0 202 25.7
CBR_g36670 Chara braunii HOM05D002848 ORTHO05D003043 7.8e-07 60.8 87 35.6
Aa31LG7G4370 Aethionema arabicum HOM05D004047 ORTHO05D003043 1.0e-06 60.5 210 28.6
Potri.005G116001 Populus trichocarpa HOM05D002848 ORTHO05D003043 1.0e-06 60.5 93 37.6
TAR625G0420 Trochodendron aralioides HOM05D002848 ORTHO05D003043 1.3e-06 60.1 91 39.6
ClCG08G014420 Citrullus lanatus HOM05D004047 ORTHO05D004772 1.7e-06 59.7 261 27.2
SalBow7G4492 Salvia bowleyana HOM05D002848 ORTHO05D003043 1.7e-06 59.7 103 35.9
Gohir.D01G099400 Gossypium hirsutum HOM05D002848 ORTHO05D003043 2.3e-06 59.3 174 28.7
Mapoly0111s0041 Marchantia polymorpha HOM05D002848 ORTHO05D003043 3.9e-06 58.5 90 33.3
Nitab4.5_0005721g0090 Nicotiana tabacum HOM05D002848 ORTHO05D003043 3.9e-06 58.5 106 33.0
CSS0044135 Camellia sinensis var. sinensis HOM05D002848 ORTHO05D003043 5.0e-06 58.2 78 37.2
Pp3c5_3550 Physcomitrium patens HOM05D002848 ORTHO05D003043 5.0e-06 58.2 101 33.7
AagrBONN_evm.TU.Sc2ySwM_362.1398 Anthoceros agrestis HOM05D002848 ORTHO05D003043 6.6e-06 57.8 86 32.6
Actinidia15403 Actinidia chinensis HOM05D002848 ORTHO05D003043 8.6e-06 57.4 83 38.6
Gorai.002G124700 Gossypium raimondii HOM05D002848 ORTHO05D003043 8.6e-06 57.4 95 35.8
Phvul.002G110100 Phaseolus vulgaris HOM05D002848 ORTHO05D003043 8.6e-06 57.4 121 30.6


User provided reference genes

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