Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 3.4e-136 488.4 261 100.0
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.3e-92 343.6 246 77.2
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 5.5e-70 268.5 232 61.2
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.6e-53 212.6 233 51.9
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.5e-35 154.1 238 37.4
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 4.9e-34 149.1 255 40.8
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 2.4e-33 146.7 228 37.7
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.2e-33 146.4 226 36.7
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 4.1e-33 146.0 228 37.3
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 5.4e-33 145.6 226 36.3
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 9.2e-33 144.8 244 35.2
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 2.0e-32 143.7 224 37.5
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 2.7e-32 143.3 225 36.9
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 4.6e-32 142.5 245 36.7
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 1.7e-31 140.6 243 35.0
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 2.3e-31 140.2 237 35.4
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 3.9e-31 139.4 253 34.8
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.0e-31 139.0 245 35.5
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 6.6e-31 138.7 208 37.0
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 6.6e-31 138.7 231 36.8
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 8.6e-31 138.3 229 33.6
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.5e-30 137.5 238 33.6
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.5e-30 137.5 240 35.8
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 1.5e-30 137.5 253 34.0
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.9e-30 137.1 229 35.8
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 1.9e-30 137.1 230 34.8
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 4.3e-30 136.0 226 35.0
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 7.3e-30 135.2 253 35.2
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 9.5e-30 134.8 225 36.9
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 9.5e-30 134.8 228 33.3
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 2.1e-29 133.7 241 32.4
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 2.1e-29 133.7 238 33.2
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 2.1e-29 133.7 255 33.3
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 3.6e-29 132.9 224 34.4
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 3.6e-29 132.9 227 35.7
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 3.6e-29 132.9 228 33.3
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.7e-29 132.5 228 34.6
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 4.7e-29 132.5 238 34.9
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 6.2e-29 132.1 238 32.4
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 8.0e-29 131.7 225 34.7
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 8.0e-29 131.7 244 33.2
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.0e-28 131.3 230 33.5
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 1.8e-28 130.6 242 36.4
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 1.8e-28 130.6 225 33.8
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 2.3e-28 130.2 236 34.7
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 2.3e-28 130.2 230 33.5
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.3e-28 130.2 238 32.4
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 3.1e-28 129.8 230 33.5
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 4.0e-28 129.4 246 33.7
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 4.0e-28 129.4 228 33.8
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 5.2e-28 129.0 227 34.8
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 5.2e-28 129.0 237 33.3
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.2e-28 129.0 229 32.8
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 5.2e-28 129.0 234 35.5
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 6.8e-28 128.6 239 34.7
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 1.2e-27 127.9 259 32.8
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 2.0e-27 127.1 255 33.7
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 2.0e-27 127.1 228 33.8
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.0e-27 127.1 231 32.9
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 2.0e-27 127.1 226 34.1
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 2.6e-27 126.7 243 31.3
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.6e-27 126.7 241 34.4
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 3.4e-27 126.3 223 33.6
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 3.4e-27 126.3 226 33.6
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 4.4e-27 125.9 221 34.8
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 4.4e-27 125.9 245 31.8
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 5.8e-27 125.6 235 33.2
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 5.8e-27 125.6 274 31.8
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 7.5e-27 125.2 268 31.7
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 7.5e-27 125.2 260 32.3
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 9.8e-27 124.8 251 34.3
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 9.8e-27 124.8 234 33.8
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.3e-26 124.4 240 33.3
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.7e-26 124.0 230 32.6
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 1.7e-26 124.0 273 31.5
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.2e-26 123.6 258 34.1
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.2e-26 123.6 231 32.5
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.2e-26 123.6 240 34.2
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 2.9e-26 123.2 235 32.8
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 4.9e-26 122.5 251 31.9
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 6.4e-26 122.1 198 32.8
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 6.4e-26 122.1 227 32.6
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 6.4e-26 122.1 264 32.6
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 1.4e-25 120.9 199 35.2
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 1.9e-25 120.6 198 32.8
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 3.2e-25 119.8 223 33.2
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 5.4e-25 119.0 240 30.8
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 7.0e-25 118.6 219 32.9
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 7.0e-25 118.6 206 34.5
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 7.0e-25 118.6 207 34.3
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 7.0e-25 118.6 219 33.3
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 9.2e-25 118.2 242 33.5
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 9.2e-25 118.2 198 36.9
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.6e-24 117.5 304 28.3
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 2.0e-24 117.1 219 32.0
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 2.0e-24 117.1 219 32.0
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 2.0e-24 117.1 219 32.0
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 2.0e-24 117.1 219 32.4
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 4.6e-24 115.9 219 31.1
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 7.8e-24 115.2 254 29.9
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 7.8e-24 115.2 184 38.6
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.7e-23 114.0 204 31.4
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 1.7e-23 114.0 207 33.3
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 3.9e-23 112.8 204 32.8
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 3.9e-23 112.8 146 41.8
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 5.0e-23 112.5 251 30.7
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 5.0e-23 112.5 251 30.7
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 5.0e-23 112.5 146 41.8
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 6.6e-23 112.1 162 35.8
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 6.6e-23 112.1 251 29.9
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 8.6e-23 111.7 235 31.9
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 1.1e-22 111.3 227 31.7
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 2.5e-22 110.2 254 29.5
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 4.3e-22 109.4 218 31.7
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 1.2e-21 107.8 205 29.8
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.2e-21 107.8 191 31.4
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 2.1e-21 107.1 156 36.5
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 2.1e-21 107.1 233 30.0
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 4.7e-21 105.9 244 29.1
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 8.1e-21 105.1 248 29.4
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 8.1e-21 105.1 191 32.5
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.8e-20 104.0 143 41.3
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 2.3e-20 103.6 202 32.2
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 3.1e-20 103.2 275 27.3
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 8.9e-20 101.7 283 26.5
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 2.6e-19 100.1 207 30.9
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 4.4e-19 99.4 218 30.7
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 4.4e-19 99.4 183 33.3
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.3e-18 97.8 202 31.2
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 1.7e-18 97.4 104 40.4
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 2.2e-18 97.1 220 29.5
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.9e-18 95.9 133 35.3
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 4.1e-17 92.8 228 28.1
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 9.2e-17 91.7 145 32.4
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 9.5e-14 81.6 123 34.1
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 1.2e-13 81.3 184 29.9
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 3.4e-11 73.2 184 28.8
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 3.4e-11 73.2 149 28.9
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 1.7e-10 70.9 216 26.9
Zm00001eb139000 Zea mays HOM05D001719 ORTHO05D007646 2.2e-10 70.5 52 80.8
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 2.9e-10 70.1 235 27.2
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 4.9e-10 69.3 184 26.6
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 8.4e-10 68.6 181 27.6
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 3.2e-09 66.6 71 38.0
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 5.4e-09 65.9 254 24.0
Zm00001eb179620 Zea mays HOM05D004617 ORTHO05D005531 7.8e-08 62.0 53 69.8
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 3.0e-07 60.1 209 23.4
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.5e-06 57.8 70 42.9
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.9e-06 57.4 228 25.0


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