Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.4e-30 135.6 64 100.0
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 5.7e-29 130.2 64 95.3
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 1.7e-25 118.6 64 85.9
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.5e-24 114.8 64 81.2
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 2.5e-24 114.8 64 82.8
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 7.3e-24 113.2 64 81.2
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 4.7e-23 110.5 64 78.1
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 78.1
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 1.4e-22 109.0 64 79.7
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 3.0e-22 107.8 63 76.2
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 3.0e-22 107.8 63 76.2
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 8.9e-22 106.3 64 71.9
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 8.9e-22 106.3 63 74.6
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 1.2e-21 105.9 63 76.2
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.5e-21 105.5 63 76.2
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.5e-21 105.5 61 80.3
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 2.0e-21 105.1 64 73.4
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 2.0e-21 105.1 63 74.6
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 2.6e-21 104.8 64 76.6
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 3.4e-21 104.4 63 74.6
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 3.4e-21 104.4 63 74.6
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 4.4e-21 104.0 64 75.0
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 9.8e-21 102.8 61 77.0
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 9.8e-21 102.8 59 76.3
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 1.7e-20 102.1 64 71.9
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 1.7e-20 102.1 64 71.9
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 1.7e-20 102.1 64 71.9
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 1.7e-20 102.1 64 71.9
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 1.7e-20 102.1 63 74.6
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 1.7e-20 102.1 64 73.4
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 2.2e-20 101.7 62 77.4
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 2.9e-20 101.3 64 71.9
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 2.9e-20 101.3 64 71.9
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 3.7e-20 100.9 74 64.9
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 3.7e-20 100.9 64 75.0
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 8.3e-20 99.8 59 76.3
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 1.1e-19 99.4 63 71.4
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 1.4e-19 99.0 64 71.9
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 1.4e-19 99.0 72 66.7
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 1.8e-19 98.6 66 69.7
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.8e-19 98.6 64 71.9
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 4.1e-19 97.4 64 70.3
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 4.1e-19 97.4 64 70.3
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 1.2e-18 95.9 62 69.4
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 1.2e-18 95.9 64 68.8
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 1.2e-18 95.9 64 68.8
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 4.6e-18 94.0 60 73.3
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 1.0e-17 92.8 58 74.1
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 1.3e-17 92.4 62 69.4
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.3e-17 91.7 58 74.1
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 5.0e-17 90.5 58 72.4
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 6.6e-17 90.1 62 69.4
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.1e-16 89.4 62 71.0
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 9.5e-16 86.3 59 69.5
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 1.4e-14 82.4 55 61.8
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 1.5e-13 79.0 58 55.2
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 1.3e-12 75.9 53 64.2
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.3e-12 75.9 64 59.4
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 1.1e-11 72.8 59 49.2
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 1.9e-11 72.0 61 55.7
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 2.0e-10 68.6 64 56.2
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 2.0e-10 68.6 45 66.7
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 7.8e-10 66.6 64 54.7
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 7.8e-10 66.6 64 54.7
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 7.8e-10 66.6 63 50.8
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 5.0e-09 63.9 64 53.1
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 6.6e-09 63.5 64 53.1
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 8.6e-09 63.2 64 51.6
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 2.5e-08 61.6 57 54.4
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 9.5e-08 59.7 57 49.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 1.6e-07 58.9 36 66.7
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 4.0e-06 54.3 63 44.4


User provided reference genes

Program Settings