Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 0.0e+00 1171.4 618 100.0
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 1.6e-293 1012.3 563 93.4
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 1.1e-289 999.6 609 85.6
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 2.7e-200 702.6 624 59.3
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 4.6e-200 701.8 623 57.6
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 1.9e-198 696.4 627 58.9
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 4.3e-198 695.3 623 57.3
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.4e-196 690.3 614 56.0
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 9.0e-196 687.6 614 57.0
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 1.2e-195 687.2 616 56.5
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 2.2e-194 682.9 615 56.3
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 2.2e-194 682.9 614 56.0
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 1.4e-193 680.2 627 57.3
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 6.0e-192 674.9 622 55.3
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 1.0e-191 674.1 621 56.2
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 1.0e-191 674.1 618 55.7
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 1.3e-191 673.7 616 56.2
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 2.3e-191 672.9 620 56.8
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 3.9e-191 672.2 622 55.0
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 8.7e-191 671.0 618 55.2
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.3e-189 667.2 614 55.0
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 1.6e-189 666.8 622 55.3
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 2.1e-189 666.4 621 55.9
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 4.5e-187 658.7 621 55.2
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 4.5e-187 658.7 621 55.9
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 3.8e-186 655.6 629 55.2
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 4.9e-186 655.2 620 56.1
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 6.5e-186 654.8 623 55.5
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 8.4e-186 654.4 624 56.1
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 8.4e-186 654.4 624 56.1
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 1.1e-185 654.1 615 54.3
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 1.1e-185 654.1 616 56.3
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 3.2e-185 652.5 624 55.9
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 9.3e-185 651.0 625 54.9
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 1.6e-184 650.2 613 56.0
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 2.1e-184 649.8 620 54.5
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 2.1e-184 649.8 620 54.4
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 4.6e-184 648.7 620 53.9
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 7.9e-184 647.9 616 54.4
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.0e-183 647.5 622 54.3
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 1.8e-183 646.7 622 55.6
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 3.9e-183 645.6 623 53.8
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 6.7e-183 644.8 609 55.3
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 4.3e-182 642.1 626 54.2
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 5.7e-182 641.7 621 54.4
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 9.7e-182 641.0 617 55.1
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 1.6e-181 640.2 623 54.7
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 2.2e-181 639.8 622 54.7
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 3.7e-181 639.0 622 55.5
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 8.2e-181 637.9 589 55.2
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 1.1e-180 637.5 624 54.6
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 1.8e-180 636.7 623 53.6
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 1.8e-180 636.7 610 54.8
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.1e-180 635.6 616 54.5
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 4.1e-180 635.6 622 53.4
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 4.1e-180 635.6 622 54.5
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 5.3e-180 635.2 622 54.2
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 6.9e-180 634.8 616 54.4
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 6.9e-180 634.8 616 53.4
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 2.0e-179 633.3 621 55.7
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.6e-179 632.9 622 54.0
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 2.6e-179 632.9 639 52.6
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 7.6e-179 631.3 610 54.8
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.3e-178 630.6 615 54.3
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 1.7e-178 630.2 614 53.6
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 2.9e-178 629.4 616 53.2
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 3.8e-178 629.0 615 53.7
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 3.8e-178 629.0 644 52.5
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 5.0e-178 628.6 629 53.7
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 6.5e-178 628.2 610 54.6
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 8.5e-178 627.9 621 54.8
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.1e-177 627.5 610 54.4
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 2.5e-177 626.3 610 54.6
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 3.2e-177 625.9 616 52.4
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 4.2e-177 625.5 631 52.1
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 5.5e-177 625.2 619 53.0
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 2.7e-176 622.9 617 52.2
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 6.1e-176 621.7 619 52.5
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.0e-175 620.9 650 50.6
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 2.3e-175 619.8 623 53.5
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 3.0e-175 619.4 618 54.4
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 9.7e-174 614.4 615 53.0
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 7.7e-171 604.7 623 52.3
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 2.5e-169 599.7 615 51.4
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 9.4e-169 597.8 622 50.3
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 3.6e-168 595.9 620 53.2
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 2.3e-167 593.2 618 51.1
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 1.1e-166 590.9 624 50.6
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 2.0e-166 590.1 600 52.0
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 7.4e-166 588.2 607 50.6
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 1.7e-165 587.0 624 48.6
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 9.1e-164 581.3 630 49.7
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 9.1e-164 581.3 630 49.7
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 1.2e-163 580.9 625 49.1
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 2.0e-163 580.1 604 52.3
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 3.4e-163 579.3 626 49.0
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 5.9e-163 578.6 626 48.4
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 2.2e-162 576.6 630 49.5
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 8.5e-162 574.7 627 49.0
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 8.5e-162 574.7 618 49.5
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.4e-161 573.9 618 52.8
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 1.3e-157 560.8 613 48.8
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 4.8e-157 558.9 619 50.2
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 8.2e-157 558.1 627 47.4
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 9.1e-156 554.7 626 47.4
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 1.2e-155 554.3 615 47.8
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 3.5e-155 552.7 627 47.4
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 1.0e-154 551.2 627 47.4
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 8.5e-154 548.1 618 49.7
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 3.2e-153 546.2 613 48.1
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 1.7e-149 533.9 615 47.0
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.7e-142 508.8 642 44.9
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.4e-140 504.2 486 53.1
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 2.7e-139 500.0 442 57.7
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 4.7e-136 489.2 462 54.1
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.8e-135 487.3 613 45.4
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 1.3e-133 481.1 449 55.0
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 6.3e-133 478.8 637 44.9
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 7.0e-124 448.7 463 52.3
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 6.0e-123 445.7 643 42.8
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 4.7e-120 436.0 622 42.8
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 1.1e-119 434.9 443 50.8
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 4.4e-118 429.5 556 45.1
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 1.1e-116 424.9 600 43.2
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 1.2e-115 421.4 634 41.8
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 5.1e-114 416.0 657 41.6
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 5.1e-114 416.0 627 41.0
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 2.2e-109 400.6 440 49.1
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 4.2e-100 369.8 446 49.6
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 4.6e-99 366.3 323 55.4
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 1.4e-95 354.8 602 38.0
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.6e-94 350.5 369 48.2
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 3.1e-87 327.0 299 53.5
Zm00001eb442080 Zea mays HOM05D003450 ORTHO05D004150 8.4e-85 318.9 178 97.2
Zm00001eb420770 Zea mays HOM05D003450 ORTHO05D004150 2.4e-84 317.4 177 97.2
Zm00001eb191840 Zea mays HOM05D003450 ORTHO05D004150 8.7e-82 308.9 170 98.8
Zm00001eb190000 Zea mays HOM05D003450 ORTHO05D004150 1.9e-81 307.8 170 98.2
Zm00001eb162870 Zea mays HOM05D003450 ORTHO05D004150 4.3e-81 306.6 170 98.2
Zm00001eb068810 Zea mays HOM05D003450 ORTHO05D004150 7.4e-81 305.8 170 97.6
Zm00001eb235100 Zea mays HOM05D003450 ORTHO05D004150 7.4e-81 305.8 170 97.6
Zm00001eb170860 Zea mays HOM05D003450 ORTHO05D004150 9.6e-81 305.4 170 98.2
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 1.1e-79 302.0 445 44.0
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 1.4e-79 301.6 278 55.0
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.6e-78 297.4 283 56.5
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 1.3e-72 278.5 269 52.8
CDE09G0700 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 1.6e-72 278.1 267 50.6
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 2.9e-69 267.3 621 31.6
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 2.2e-61 241.1 465 35.5
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.5e-60 236.5 247 51.4
TAR623G1393 Trochodendron aralioides HOM05D003450 ORTHO05D004150 4.3e-57 226.9 179 67.0
Zm00001eb367390 Zea mays HOM05D003450 ORTHO05D004150 1.7e-56 224.9 124 99.2
Actinidia14585 Actinidia chinensis HOM05D003450 ORTHO05D004150 1.1e-55 222.2 190 58.4
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.9e-53 214.2 238 45.0
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 6.7e-50 203.0 232 50.9
Gohir.D07G231100 Gossypium hirsutum HOM05D003450 ORTHO05D004150 3.3e-49 200.7 217 48.4
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 8.2e-48 196.1 753 28.0
C02p55220 Brassica napus HOM05D003450 ORTHO05D004150 1.4e-47 195.3 230 46.1
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 5.0e-45 186.8 216 46.8
RcHm_v2.0_Chr2g0173251 Rosa chinensis HOM05D003450 ORTHO05D004150 8.5e-45 186.0 310 37.1
FAN18G3542 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.6e-41 174.5 148 62.2
BolC2t11570H Brassica oleracea HOM05D003450 ORTHO05D004150 2.2e-40 171.4 226 45.1
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 2.2e-40 171.4 208 42.8
CSS0010567 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.0e-37 160.2 124 67.7
Sc07g0005170 Simmondsia chinensis HOM05D003450 ORTHO05D004150 8.5e-37 159.5 130 63.8
PRCOL_00005576 Prasinoderma coloniale HOM05D003450 ORTHO05D004150 6.1e-35 153.3 638 26.5
CBR_g57070 Chara braunii HOM05D003450 ORTHO05D004150 1.5e-33 148.7 925 23.0
CAN.G1274.36 Capsicum annuum HOM05D003450 ORTHO05D004150 8.3e-32 142.9 159 47.8
Solyc02g084490.1 Solanum lycopersicum HOM05D003450 ORTHO05D004150 1.1e-31 142.5 141 50.4
Atru.chr6.2428 Acer truncatum HOM05D003450 ORTHO05D004150 1.8e-23 115.2 81 70.4
Atru.chr6.2427 Acer truncatum HOM05D003450 ORTHO05D004150 9.1e-23 112.8 172 40.7
BolC2t11571H Brassica oleracea HOM05D003450 ORTHO05D004150 2.3e-21 108.2 230 34.3
TPR.G33244 Trifolium pratense HOM05D003450 ORTHO05D004150 1.9e-20 105.1 115 53.0
Aqoxy2G03587 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 1.0e-13 82.8 91 52.7
QL10p029699 Quercus lobata HOM05D002292 ORTHO05D008330 2.0e-09 68.6 92 43.5
Cre06.g271950 Chlamydomonas reinhardtii HOM05D003450 ORTHO05D004150 1.1e-07 62.8 365 22.7
Sopen02g029170 Solanum pennellii HOM05D003450 ORTHO05D004150 1.4e-07 62.4 277 26.0
TPR.G33285 Trifolium pratense HOM05D003450 ORTHO05D004150 1.9e-07 62.0 82 34.1
Hma1.2p1_0035F.1_g022380 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 2.7e-06 58.2 83 38.6


User provided reference genes

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