Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb134400 Zea mays HOM05D030036 ORTHO05D030390 5.4e-216 754.2 425 100.0
Zm00001eb032730 Zea mays HOM05D030036 ORTHO05D030390 1.5e-149 533.5 457 66.1
Os12g0631600 Oryza sativa ssp. japonica HOM05D030036 ORTHO05D030390 2.0e-69 267.3 397 43.8
Os05g0488100 Oryza sativa ssp. japonica HOM05D030036 ORTHO05D030390 8.2e-47 192.2 334 39.2
Zm00001eb341850 Zea mays HOM05D000408 ORTHO05D001664 2.0e-24 117.9 120 56.7
Zm00001eb213720 Zea mays HOM05D025363 ORTHO05D002422 1.5e-16 91.7 233 32.6
Os03g0776400 Oryza sativa ssp. japonica HOM05D025363 ORTHO05D002422 3.2e-11 73.9 213 29.6
Gorai.007G204200 Gossypium raimondii HOM05D002420 ORTHO05D002422 1.2e-10 72.0 216 28.7
Lj2P450T13 Lonicera japonica HOM05D002420 ORTHO05D002422 1.6e-10 71.6 322 25.2
COL.COLO4_22098 Corchorus olitorius HOM05D002420 ORTHO05D002422 2.7e-10 70.9 220 30.0
Duzib147G0753 Durio zibethinus HOM05D002420 ORTHO05D002422 2.7e-10 70.9 216 30.1
Gohir.A11G185100 Gossypium hirsutum HOM05D002420 ORTHO05D002422 4.7e-10 70.1 216 28.7
FAN23G1330 Fragaria x ananassa HOM05D002420 ORTHO05D002422 1.0e-09 68.9 194 31.4
MD15G1264700 Malus domestica HOM05D002420 ORTHO05D002422 2.3e-09 67.8 220 29.5
Nitab4.5_0000434g0020 Nicotiana tabacum HOM05D002420 ORTHO05D002422 2.3e-09 67.8 301 27.2
FvH4_1g13490 Fragaria vesca HOM05D002420 ORTHO05D002422 3.0e-09 67.4 194 30.9
FAN19G1318 Fragaria x ananassa HOM05D002420 ORTHO05D002422 3.0e-09 67.4 194 30.9
FAN26G2215 Fragaria x ananassa HOM05D002420 ORTHO05D002422 3.0e-09 67.4 194 30.9
Dinv39969 Davidia involucrata HOM05D002420 ORTHO05D002422 4.0e-09 67.0 231 28.1
Nitab4.5_0001827g0040 Nicotiana tabacum HOM05D002420 ORTHO05D002422 4.0e-09 67.0 301 27.6
FAN28G2838 Fragaria x ananassa HOM05D002420 ORTHO05D002422 8.8e-09 65.9 193 30.6
Peaxi162Scf00515g00043 Petunia axillaris HOM05D002420 ORTHO05D002422 8.8e-09 65.9 190 30.5
Solyc01g097610.3 Solanum lycopersicum HOM05D002420 ORTHO05D002422 1.5e-08 65.1 337 25.8
Sopen01g041240 Solanum pennellii HOM05D002420 ORTHO05D002422 1.5e-08 65.1 340 25.3
Lsat_1_v5_gn_4_150760 Lactuca sativa HOM05D002420 ORTHO05D002422 2.6e-08 64.3 216 28.2
EL10Ac6g14933 Beta vulgaris HOM05D002420 ORTHO05D002422 2.8e-07 60.8 221 25.3
RcHm_v2.0_Chr2g0101881 Rosa chinensis HOM05D002420 ORTHO05D002422 2.8e-07 60.8 192 29.7
Gohir.D11G191566 Gossypium hirsutum HOM05D002420 ORTHO05D002422 3.7e-07 60.5 96 40.6
PGSC0003DMG400019444 Solanum tuberosum HOM05D002420 ORTHO05D002422 3.7e-07 60.5 337 24.9
Hma1.2p1_0400F.1_g144540 Hydrangea macrophylla HOM05D002420 ORTHO05D002422 1.4e-06 58.5 232 25.9
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 1.8e-06 58.2 221 26.2
CAN.G358.109 Capsicum annuum HOM05D002420 ORTHO05D002422 2.4e-06 57.8 194 30.4
CAN.G134.121 Capsicum annuum HOM05D002420 ORTHO05D002422 3.1e-06 57.4 192 27.6
Rhsim08G0114200 Rhododendron simsii HOM05D002420 ORTHO05D002422 4.1e-06 57.0 204 26.5
Atru.chr3.556 Acer truncatum HOM05D002420 ORTHO05D002422 7.0e-06 56.2 178 28.1
Potri.007G027300 Populus trichocarpa HOM05D002420 ORTHO05D002422 7.0e-06 56.2 166 27.1
GSVIVG01018983001 Vitis vinifera HOM05D002420 ORTHO05D002422 7.0e-06 56.2 196 26.5


User provided reference genes

Program Settings