Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 3.1e-78 295.0 147 100.0
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 8.4e-76 287.0 145 98.6
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 2.6e-61 238.8 149 81.2
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 2.6e-61 238.8 149 81.2
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 6.1e-58 227.6 117 99.1
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 4.5e-45 184.9 140 66.4
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 1.7e-36 156.4 138 57.2
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 9.4e-35 150.6 128 57.0
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 1.4e-33 146.7 122 58.2
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 5.7e-32 141.4 127 55.9
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 7.5e-32 141.0 126 56.3
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 7.5e-32 141.0 132 54.5
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 9.7e-32 140.6 126 55.6
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 1.3e-31 140.2 124 56.5
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.3e-31 140.2 138 53.6
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.8e-31 139.0 126 55.6
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 2.8e-31 139.0 126 54.8
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 2.8e-31 139.0 125 55.2
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 3.7e-31 138.7 125 56.0
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 4.8e-31 138.3 126 56.3
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 4.8e-31 138.3 130 54.6
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 8.2e-31 137.5 120 55.8
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 8.2e-31 137.5 120 57.5
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 1.1e-30 137.1 120 57.5
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 1.1e-30 137.1 120 56.7
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 1.1e-30 137.1 125 56.0
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 1.4e-30 136.7 128 52.3
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 1.4e-30 136.7 120 56.7
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 1.4e-30 136.7 138 52.9
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 1.8e-30 136.3 120 56.7
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 1.8e-30 136.3 126 54.8
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 1.8e-30 136.3 120 56.7
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 1.8e-30 136.3 120 55.8
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 1.8e-30 136.3 119 56.3
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 2.4e-30 136.0 125 56.0
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 2.4e-30 136.0 125 54.4
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 3.1e-30 135.6 126 54.8
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 3.1e-30 135.6 125 55.2
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 4.1e-30 135.2 126 54.8
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 4.1e-30 135.2 126 53.2
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 5.3e-30 134.8 120 55.8
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 5.3e-30 134.8 120 55.8
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 7.0e-30 134.4 126 54.0
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 9.1e-30 134.0 120 55.8
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 9.1e-30 134.0 120 56.7
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 1.2e-29 133.7 120 56.7
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 1.2e-29 133.7 120 55.0
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 1.2e-29 133.7 124 54.0
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 1.2e-29 133.7 120 56.7
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 1.6e-29 133.3 120 58.3
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 1.6e-29 133.3 120 55.0
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 1.6e-29 133.3 126 54.0
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 1.6e-29 133.3 120 55.8
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 2.0e-29 132.9 122 52.5
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.0e-29 132.9 120 55.0
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 2.7e-29 132.5 120 55.0
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 2.7e-29 132.5 120 55.0
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 2.7e-29 132.5 120 53.3
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 3.5e-29 132.1 120 53.3
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 3.5e-29 132.1 120 53.3
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 3.5e-29 132.1 120 54.2
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 3.5e-29 132.1 120 55.0
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 4.5e-29 131.7 120 54.2
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 4.5e-29 131.7 120 54.2
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 4.5e-29 131.7 118 56.8
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 5.9e-29 131.3 120 54.2
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 5.9e-29 131.3 120 55.0
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 5.9e-29 131.3 120 55.0
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 5.9e-29 131.3 125 54.4
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 5.9e-29 131.3 120 55.0
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 7.7e-29 131.0 120 54.2
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 7.7e-29 131.0 125 52.8
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 1.0e-28 130.6 120 54.2
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 1.3e-28 130.2 123 54.5
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.3e-28 130.2 120 55.0
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 2.2e-28 129.4 120 52.5
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 2.9e-28 129.0 120 52.5
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 3.8e-28 128.6 120 54.2
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 8.5e-28 127.5 122 54.1
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 8.5e-28 127.5 125 53.6
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 1.9e-27 126.3 120 51.7
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 3.2e-27 125.6 120 51.7
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 4.2e-27 125.2 120 52.5
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 4.2e-27 125.2 120 51.7
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 5.5e-27 124.8 120 50.8
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 7.2e-27 124.4 120 52.5
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 2.1e-26 122.9 120 52.5
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 2.7e-26 122.5 130 50.8
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 2.7e-26 122.5 120 52.5
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 2.7e-26 122.5 120 52.5
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 8.0e-26 120.9 121 52.9
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 8.0e-26 120.9 120 51.7
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 1.4e-25 120.2 155 44.5
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 1.4e-25 120.2 120 51.7
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 4.0e-25 118.6 116 53.4
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 6.8e-25 117.9 117 52.1
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.5e-24 116.7 121 51.2
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 1.5e-24 116.7 128 49.2
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.6e-24 115.9 107 55.1
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 2.6e-24 115.9 107 55.1
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 7.5e-24 114.4 100 58.0
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 7.5e-24 114.4 107 54.2
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 7.5e-24 114.4 100 58.0
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.3e-23 113.6 108 54.6
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 1.3e-23 113.6 112 52.7
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 1.3e-23 113.6 107 54.2
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 1.7e-23 113.2 100 58.0
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 2.2e-23 112.8 121 47.9
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 2.8e-23 112.5 156 41.7
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 2.8e-23 112.5 100 57.0
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 2.8e-23 112.5 127 50.4
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 6.3e-23 111.3 118 44.9
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 3.1e-22 109.0 109 54.1
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 4.1e-22 108.6 133 44.4
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 5.4e-22 108.2 82 61.0
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 5.0e-20 101.7 112 46.4
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 1.9e-19 99.8 99 52.5
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 1.4e-17 93.6 92 52.2
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 8.9e-17 90.9 116 40.5
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 2.2e-15 86.3 78 47.4
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 2.4e-14 82.8 121 37.2
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 1.6e-13 80.1 121 37.2
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 3.5e-13 79.0 62 61.3


User provided reference genes

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