Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb128690 Zea mays HOM05D004518 ORTHO05D005434 7.9e-158 560.5 293 100.0
Os01g0268800 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 1.5e-129 466.5 293 82.9
Dinv03206 Davidia involucrata HOM05D004518 ORTHO05D005434 5.2e-101 371.7 295 65.4
MD14G1089500 Malus domestica HOM05D004518 ORTHO05D005434 5.7e-100 368.2 294 66.0
Dinv05720 Davidia involucrata HOM05D004518 ORTHO05D005434 1.3e-99 367.1 295 64.1
Hma1.2p1_0252F.1_g102810 Hydrangea macrophylla HOM05D004518 ORTHO05D005434 1.3e-99 367.1 296 64.5
PGR031G0872 Punica granatum HOM05D004518 ORTHO05D005434 1.7e-99 366.7 293 63.8
CSS0002759 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 2.2e-99 366.3 296 64.2
CSS0023469 Camellia sinensis var. sinensis HOM05D004518 ORTHO05D005434 2.2e-99 366.3 296 64.2
GSVIVG01025741001 Vitis vinifera HOM05D004518 ORTHO05D005434 2.2e-99 366.3 296 64.5
PSO339G3176 Papaver somniferum HOM05D004518 ORTHO05D005434 2.8e-99 365.9 296 64.2
Prupe.7G034400 Prunus persica HOM05D004518 ORTHO05D005434 1.8e-98 363.2 294 64.6
CARHR166870 Cardamine hirsuta HOM05D004518 ORTHO05D005434 2.4e-98 362.8 296 65.2
Cfa019996 Carpinus fangiana HOM05D004518 ORTHO05D005434 2.4e-98 362.8 294 63.9
PSO384G3583 Papaver somniferum HOM05D004518 ORTHO05D005434 3.1e-98 362.5 296 63.9
AT3G56740 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.6e-97 360.1 295 63.7
MD12G1096200 Malus domestica HOM05D004518 ORTHO05D005434 1.6e-97 360.1 295 66.1
BcaC07g40121 Brassica carinata HOM05D004518 ORTHO05D005434 2.0e-97 359.8 296 65.2
TAR623G1611 Trochodendron aralioides HOM05D004518 ORTHO05D005434 2.7e-97 359.4 293 63.5
Atru.chr1.1396 Acer truncatum HOM05D004518 ORTHO05D005434 3.5e-97 359.0 294 63.9
ClCG10G013700 Citrullus lanatus HOM05D004518 ORTHO05D005434 4.5e-97 358.6 295 64.4
MELO3C026597.2 Cucumis melo HOM05D004518 ORTHO05D005434 4.5e-97 358.6 295 64.1
Actinidia06430 Actinidia chinensis HOM05D004518 ORTHO05D005434 7.7e-97 357.8 296 63.9
BcaC07g39982 Brassica carinata HOM05D004518 ORTHO05D005434 1.3e-96 357.1 296 64.9
CsaV3_3G042950 Cucumis sativus L. HOM05D004518 ORTHO05D005434 1.3e-96 357.1 295 64.1
Gohir.D13G001500 Gossypium hirsutum HOM05D004518 ORTHO05D005434 1.7e-96 356.7 295 65.1
Gorai.013G001400 Gossypium raimondii HOM05D004518 ORTHO05D005434 1.7e-96 356.7 295 65.1
Carub.0005s2348 Capsella rubella HOM05D004518 ORTHO05D005434 2.3e-96 356.3 295 62.7
Sp5g05830 Schrenkiella parvula HOM05D004518 ORTHO05D005434 2.3e-96 356.3 294 63.6
RcHm_v2.0_Chr2g0125741 Rosa chinensis HOM05D004518 ORTHO05D005434 2.9e-96 355.9 294 63.6
Thhalv10006131m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 3.8e-96 355.5 295 62.7
THA.LOC104824396 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 8.6e-96 354.4 297 63.3
AL5G38100 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 1.1e-95 354.0 295 62.7
FAN05G1433 Fragaria x ananassa HOM05D004518 ORTHO05D005434 1.5e-95 353.6 294 62.9
Glyma.19G129500 Glycine max HOM05D004518 ORTHO05D005434 1.5e-95 353.6 295 62.7
A09p49580 Brassica napus HOM05D004518 ORTHO05D005434 2.5e-95 352.8 308 62.7
BraA09t40411Z Brassica rapa HOM05D004518 ORTHO05D005434 2.5e-95 352.8 308 62.7
Sed0000448 Sechium edule HOM05D004518 ORTHO05D005434 3.3e-95 352.4 294 61.2
CiPaw.09G048700 Carya illinoinensis HOM05D004518 ORTHO05D005434 4.2e-95 352.1 294 62.6
THA.LOC104803258 Tarenaya hassleriana HOM05D004518 ORTHO05D005434 4.2e-95 352.1 296 63.2
Lj1g0025115 Lotus japonicus HOM05D004518 ORTHO05D005434 7.2e-95 351.3 294 62.2
CANSAT64G1638 Cannabis sativa HOM05D004518 ORTHO05D005434 9.5e-95 350.9 294 63.9
Duzib106G1523 Durio zibethinus HOM05D004518 ORTHO05D005434 1.2e-94 350.5 295 62.7
Phvul.001G121800 Phaseolus vulgaris HOM05D004518 ORTHO05D005434 1.2e-94 350.5 297 62.6
COL.COLO4_07077 Corchorus olitorius HOM05D004518 ORTHO05D005434 2.1e-94 349.7 294 62.2
Thecc.05G127700 Theobroma cacao HOM05D004518 ORTHO05D005434 2.8e-94 349.4 295 63.1
Migut.J01644 Erythranthe guttata HOM05D004518 ORTHO05D005434 3.6e-94 349.0 295 60.3
BolC8t50814H Brassica oleracea HOM05D004518 ORTHO05D005434 4.7e-94 348.6 308 62.3
MBI13_g09215_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 6.1e-94 348.2 299 63.9
Glyma.03G126400 Glycine max HOM05D004518 ORTHO05D005434 1.0e-93 347.4 295 62.4
TWI53G0703 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.0e-93 347.4 293 60.8
CiPaw.10G040700 Carya illinoinensis HOM05D004518 ORTHO05D005434 1.8e-93 346.7 294 61.9
Potri.006G040100 Populus trichocarpa HOM05D004518 ORTHO05D005434 1.8e-93 346.7 294 61.9
Sed0017951 Sechium edule HOM05D004518 ORTHO05D005434 2.3e-93 346.3 291 62.9
Aa31LG10G11580 Aethionema arabicum HOM05D004518 ORTHO05D005434 3.0e-93 345.9 295 63.1
FvH4_6g25340 Fragaria vesca HOM05D004518 ORTHO05D005434 4.0e-93 345.5 294 62.2
Cc06_g19630 Coffea canephora HOM05D004518 ORTHO05D005434 6.8e-93 344.7 295 60.0
Lalb_Chr24g0400371 Lupinus albus HOM05D004518 ORTHO05D005434 6.8e-93 344.7 294 61.6
VMungo1383G1992 Vigna mungo HOM05D004518 ORTHO05D005434 8.9e-93 344.4 299 62.9
Lalb_Chr14g0365751 Lupinus albus HOM05D004518 ORTHO05D005434 1.2e-92 344.0 294 61.6
Medtr7g089550 Medicago truncatula HOM05D004518 ORTHO05D005434 2.6e-92 342.8 294 61.2
CDE08G0004 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 3.4e-92 342.4 298 60.1
Rhsim07G0181600 Rhododendron simsii HOM05D004518 ORTHO05D005434 4.4e-92 342.0 318 58.2
FAN09G3120 Fragaria x ananassa HOM05D004518 ORTHO05D005434 9.8e-92 340.9 320 57.8
Peaxi162Scf00696g00027 Petunia axillaris HOM05D004518 ORTHO05D005434 1.3e-91 340.5 299 59.2
PGSC0003DMG400023695 Solanum tuberosum HOM05D004518 ORTHO05D005434 1.3e-91 340.5 296 58.4
Manes.09G003700 Manihot esculenta HOM05D004518 ORTHO05D005434 1.7e-91 340.1 291 61.5
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 2.2e-91 339.7 306 61.4
Sopen10g031320 Solanum pennellii HOM05D004518 ORTHO05D005434 2.8e-91 339.3 296 58.1
SGA_v2.0_scaffold69G23161 Striga asiatica HOM05D004518 ORTHO05D005434 6.3e-91 338.2 296 60.5
Ciclev10012184m.g Citrus clementina HOM05D004518 ORTHO05D005434 8.3e-91 337.8 286 63.3
arahy.Tifrunner.gnm1.ann1.5HY1FK Arachis hypogaea HOM05D004518 ORTHO05D005434 1.1e-90 337.4 324 58.0
MBI19_g14619_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 3.1e-90 335.9 321 58.9
Solyc10g080810.2 Solanum lycopersicum HOM05D004518 ORTHO05D005434 3.1e-90 335.9 296 57.4
ECA247G2040 Erigeron canadensis HOM05D004518 ORTHO05D005434 4.1e-90 335.5 295 61.0
HanXRQChr10g0292841 Helianthus annuus HOM05D004518 ORTHO05D005434 4.1e-90 335.5 294 62.6
TWI77G0289 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 9.2e-90 334.3 294 59.9
TWI74G1405 Tripterygium wilfordii HOM05D004518 ORTHO05D005434 1.2e-89 334.0 294 60.5
Haze_20236 Corylus avellana HOM05D002003 ORTHO05D005434 1.6e-89 333.6 327 56.6
MSTRG.19796 Avicennia marina HOM05D004518 ORTHO05D005434 3.5e-89 332.4 294 59.9
Nitab4.5_0001173g0020 Nicotiana tabacum HOM05D004518 ORTHO05D005434 1.3e-88 330.5 296 60.8
SGA_v2.0_scaffold66G22264 Striga asiatica HOM05D004518 ORTHO05D005434 1.3e-88 330.5 286 61.2
EL10Ac3g07249 Beta vulgaris HOM05D004518 ORTHO05D005434 2.3e-88 329.7 295 60.0
Lsat_1_v5_gn_9_30021 Lactuca sativa HOM05D004518 ORTHO05D005434 5.0e-88 328.6 292 60.3
Eucgr.K01645 Eucalyptus grandis HOM05D004518 ORTHO05D005434 1.5e-87 327.0 297 59.9
Thhalv10017035m.g Eutrema salsugineum HOM05D004518 ORTHO05D005434 4.3e-87 325.5 293 60.1
HPP92_018980 Vanilla planifolia HOM05D004518 ORTHO05D005434 1.6e-86 323.6 295 58.3
Eucgr.A02232 Eucalyptus grandis HOM05D004518 ORTHO05D005434 4.7e-86 322.0 292 60.3
Sp4g23460 Schrenkiella parvula HOM05D004518 ORTHO05D005434 6.1e-86 321.6 293 59.0
Aa31LG3G910 Aethionema arabicum HOM05D004518 ORTHO05D005434 1.0e-85 320.9 293 59.7
BraA05t19203Z Brassica rapa HOM05D004518 ORTHO05D005434 1.0e-85 320.9 299 59.9
Oeu022968.1 Olea europaea HOM05D004518 ORTHO05D005434 2.3e-85 319.7 295 57.6
AL4G39130 Arabidopsis lyrata HOM05D004518 ORTHO05D005434 2.0e-84 316.6 294 59.5
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 3.4e-84 315.8 353 49.3
Aa31LG3G900 Aethionema arabicum HOM05D004518 ORTHO05D005434 7.5e-84 314.7 311 57.2
CARHR136250 Cardamine hirsuta HOM05D004518 ORTHO05D005434 7.5e-84 314.7 293 58.0
AT2G41160 Arabidopsis thaliana HOM05D004518 ORTHO05D005434 1.3e-83 313.9 294 58.5
BolC4t21891H Brassica oleracea HOM05D004518 ORTHO05D005434 1.7e-83 313.5 300 59.0
Nn7g36811 Nelumbo nucifera HOM05D004518 ORTHO05D005434 2.9e-83 312.8 272 60.3
A05p02070 Brassica napus HOM05D004518 ORTHO05D005434 6.4e-83 311.6 287 59.2
Carub.0004s2347 Capsella rubella HOM05D004518 ORTHO05D005434 1.9e-82 310.1 293 58.4
unitig_744.g24180 Utricularia gibba HOM05D004518 ORTHO05D005434 2.0e-81 306.6 297 56.2
C04p02460 Brassica napus HOM05D004518 ORTHO05D005434 1.0e-80 304.3 291 59.5
Peaxi162Scf00076g00330 Petunia axillaris HOM05D004518 ORTHO05D005434 1.7e-80 303.5 288 55.6
CDE08G0582 Ceratophyllum demersum HOM05D004518 ORTHO05D005434 1.1e-79 300.8 295 59.0
unitig_21.g20688 Utricularia gibba HOM05D004518 ORTHO05D005434 2.5e-79 299.7 297 53.9
Gohir.A13G002100 Gossypium hirsutum HOM05D004518 ORTHO05D005434 3.3e-79 299.3 295 57.3
Potri.016G035800 Populus trichocarpa HOM05D004518 ORTHO05D005434 3.3e-79 299.3 294 56.1
Aqoxy2G00434 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 9.5e-79 297.7 239 61.5
BcaC02g12756 Brassica carinata HOM05D004518 ORTHO05D005434 4.7e-78 295.4 341 52.2
vmacro05025 Vaccinium macrocarpon HOM05D004518 ORTHO05D005434 1.8e-77 293.5 302 53.6
HPP92_001027 Vanilla planifolia HOM05D004518 ORTHO05D005434 4.4e-76 288.9 253 62.1
FAN02G2919 Fragaria x ananassa HOM05D004518 ORTHO05D005434 7.5e-76 288.1 238 62.6
Mapoly0023s0107 Marchantia polymorpha HOM05D004518 ORTHO05D005434 1.2e-73 280.8 307 51.5
SMO364G0164 Selaginella moellendorffii HOM05D004518 ORTHO05D005434 1.2e-73 280.8 305 52.8
Pp3c15_13440 Physcomitrium patens HOM05D004518 ORTHO05D005434 1.6e-73 280.4 292 50.0
QL07p011297 Quercus lobata HOM05D004518 ORTHO05D005434 2.1e-73 280.0 277 55.6
Pp3c9_17200 Physcomitrium patens HOM05D004518 ORTHO05D005434 2.7e-73 279.6 273 53.8
Duzib128G0186 Durio zibethinus HOM05D004518 ORTHO05D005434 7.8e-73 278.1 238 61.3
CAN.G128.73 Capsicum annuum HOM05D004518 ORTHO05D005434 1.7e-72 276.9 240 59.6
arahy.Tifrunner.gnm1.ann1.CJ2XLM Arachis hypogaea HOM05D004518 ORTHO05D005434 6.2e-70 268.5 314 51.3
Hund24582 Selenicereus undatus HOM05D004518 ORTHO05D005434 2.0e-68 263.5 295 55.3
Sc13g0001070 Simmondsia chinensis HOM05D004518 ORTHO05D005434 2.9e-67 259.6 206 64.1
Psat3g079720 Pisum sativum HOM05D004518 ORTHO05D005434 4.9e-67 258.8 198 65.2
Hund19087 Selenicereus undatus HOM05D004518 ORTHO05D005434 1.2e-65 254.2 295 50.8
Sabra06G0027100 Salix brachista HOM05D004518 ORTHO05D005434 1.0e-64 251.1 276 54.7
AUR62030305 Chenopodium quinoa HOM05D004518 ORTHO05D005434 6.6e-64 248.4 295 50.8
Zm00001eb150410 Zea mays HOM05D004518 ORTHO05D005434 1.5e-63 247.3 244 53.7
Actinidia22259 Actinidia chinensis HOM05D004518 ORTHO05D005434 3.3e-63 246.1 218 61.5
Aqoxy2G02076 Aquilegia oxysepala HOM05D004518 ORTHO05D005434 3.1e-61 239.6 206 60.2
AUR62018357 Chenopodium quinoa HOM05D004518 ORTHO05D005434 5.2e-61 238.8 295 50.5
ATR0307G082 Amborella trichopoda HOM05D004518 ORTHO05D005434 6.8e-61 238.4 208 60.6
DCAR_020579 Daucus carota HOM05D004518 ORTHO05D005434 2.6e-60 236.5 207 61.8
CDE02G2541 Ceratophyllum demersum HOM05D002603 ORTHO05D002907 5.8e-60 235.3 289 47.4
AagrBONN_evm.TU.Sc2ySwM_344.4495 Anthoceros agrestis HOM05D004518 ORTHO05D005434 3.2e-58 229.6 213 56.3
TPR.G16082 Trifolium pratense HOM05D002003 ORTHO05D002037 4.2e-58 229.2 206 58.7
SHI48963 Sapria himalayana HOM05D004518 ORTHO05D005434 7.8e-57 224.9 367 40.3
CBR_g11167 Chara braunii HOM05D004518 ORTHO05D005434 1.7e-56 223.8 317 42.0
Os01g0806000 Oryza sativa ssp. japonica HOM05D004518 ORTHO05D005434 1.4e-53 214.2 208 55.8
CBR_g18715 Chara braunii HOM05D004518 ORTHO05D005434 1.1e-50 204.5 333 40.5
Lj1A1090G38 Lonicera japonica HOM05D004518 ORTHO05D005434 1.2e-49 201.1 289 42.2
SGA_v2.0_scaffold66G22363 Striga asiatica HOM05D004518 ORTHO05D005434 7.8e-49 198.4 328 41.5
Lj2A402T37 Lonicera japonica HOM05D004518 ORTHO05D005434 3.6e-46 189.5 182 56.6
Pp3c26_11360 Physcomitrium patens HOM05D004518 ORTHO05D005434 1.4e-42 177.6 336 35.7
Cpa.g.sc92.78 Carica papaya HOM05D004518 ORTHO05D005434 1.1e-34 151.4 160 51.9
Cre08.g386050 Chlamydomonas reinhardtii HOM05D004518 ORTHO05D005434 2.7e-33 146.7 309 32.7
TPR.G27640 Trifolium pratense HOM05D004518 ORTHO05D005434 2.1e-25 120.6 90 66.7
SEGI_26369 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 1.8e-24 117.5 82 65.9
MSTRG.5996 Avicennia marina HOM05D004518 ORTHO05D005434 2.3e-24 117.1 90 63.3
TAR369G0459 Trochodendron aralioides HOM05D004518 ORTHO05D005434 5.1e-16 89.4 103 52.4
BolC4t21949H Brassica oleracea HOM05D004518 ORTHO05D005434 2.5e-15 87.0 128 42.2
Psat3g079760 Pisum sativum HOM05D004518 ORTHO05D005434 5.7e-15 85.9 74 58.1
C04p03070 Brassica napus HOM05D004518 ORTHO05D005434 1.7e-14 84.3 147 38.1
FAN02G0789 Fragaria x ananassa HOM05D004518 ORTHO05D011253 3.2e-10 70.1 68 60.3
Dinv05308 Davidia involucrata HOM05D004518 ORTHO05D005434 3.0e-08 63.5 60 50.0
MBI19_g45264_MAGBIO Magnolia biondii HOM05D004518 ORTHO05D005434 1.5e-07 61.2 170 32.9
SEGI_18914 Sequoiadendron giganteum HOM05D004518 ORTHO05D005434 2.2e-06 57.4 109 38.5


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