Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb128510 Zea mays HOM05D009951 ORTHO05D012391 1.3e-186 656.4 373 100.0
Zm00001eb170030 Zea mays HOM05D009951 ORTHO05D012391 1.9e-140 503.1 326 92.0
Zm00001eb408810 Zea mays HOM05D009951 ORTHO05D012391 5.0e-117 425.2 254 94.1
Zm00001eb244750 Zea mays HOM05D009951 ORTHO05D012391 8.6e-117 424.5 261 92.0
Zm00001eb081080 Zea mays HOM05D009951 ORTHO05D012391 1.2e-110 404.1 217 95.4
Zm00001eb334530 Zea mays HOM05D009951 ORTHO05D012391 3.7e-104 382.5 222 94.1
Zm00001eb350880 Zea mays HOM05D009951 ORTHO05D012391 4.6e-102 375.6 212 95.8
Zm00001eb073070 Zea mays HOM05D009951 ORTHO05D012391 4.7e-99 365.5 201 93.5
Zm00001eb359940 Zea mays HOM05D009951 ORTHO05D012391 1.2e-97 360.9 320 76.9
Zm00001eb109050 Zea mays HOM05D009951 ORTHO05D012391 1.1e-76 291.2 181 95.0
Zm00001eb117440 Zea mays HOM05D009951 ORTHO05D012391 1.1e-76 291.2 181 95.0
Zm00001eb111240 Zea mays HOM05D009951 ORTHO05D012391 5.6e-76 288.9 181 94.5
Zm00001eb170680 Zea mays HOM05D009951 ORTHO05D012391 7.3e-76 288.5 181 94.5
Zm00001eb347890 Zea mays HOM05D009951 ORTHO05D012391 1.1e-74 284.6 182 93.4
Zm00001eb347880 Zea mays HOM05D009951 ORTHO05D012391 1.9e-63 247.3 194 79.4
Zm00001eb037850 Zea mays HOM05D009951 ORTHO05D012391 5.7e-52 209.1 123 91.9
Zm00001eb219470 Zea mays HOM05D009951 ORTHO05D012391 7.7e-49 198.7 143 83.9
Zm00001eb157930 Zea mays HOM05D009951 ORTHO05D012391 3.9e-45 186.4 112 82.1
Zm00001eb281220 Zea mays HOM05D009951 ORTHO05D012391 1.3e-35 154.8 107 79.4
Zm00001eb219460 Zea mays HOM05D009951 ORTHO05D012391 2.5e-23 114.0 74 98.6
Zm00001eb036280 Zea mays HOM05D009951 ORTHO05D012391 2.1e-22 110.9 54 98.1
Os11g0303800 Oryza sativa ssp. japonica HOM05D000589 ORTHO05D000401 9.7e-20 102.1 180 30.6
Zm00001eb085790 Zea mays HOM05D001576 ORTHO05D000401 1.3e-19 101.7 178 34.3
Zm00001eb199990 Zea mays HOM05D001576 ORTHO05D000401 1.3e-19 101.7 178 34.3
Os08g0178900 Oryza sativa ssp. japonica HOM05D009951 ORTHO05D020947 1.7e-19 101.3 180 35.0
Os01g0549300 Oryza sativa ssp. japonica HOM05D009951 ORTHO05D020947 2.2e-19 100.9 180 35.6
AUR62034330 Chenopodium quinoa HOM05D016588 ORTHO05D019835 1.1e-18 98.6 269 26.4
Os08g0225900 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 3.5e-17 93.6 171 30.4
Os01g0373400 Oryza sativa ssp. japonica HOM05D039411 ORTHO05D020947 5.9e-17 92.8 205 31.2
Os08g0561000 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 7.7e-17 92.4 154 32.5
Os09g0241700 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.0e-16 92.0 172 33.7
Os04g0286500 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 1.7e-16 91.3 171 29.8
Os06g0521000 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.2e-16 90.9 125 38.4
Os01g0527900 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 5.0e-16 89.7 213 32.4
Carub.0006s1187 Capsella rubella HOM05D000589 ORTHO05D000401 6.5e-16 89.4 186 30.6
Carub.0336s0001 Capsella rubella HOM05D000589 ORTHO05D000401 6.5e-16 89.4 252 28.2
CANSAT56G3242 Cannabis sativa HOM05D002730 ORTHO05D003261 1.1e-15 88.6 245 27.3
HanXRQChr03g0063981 Helianthus annuus HOM05D006295 ORTHO05D008061 4.2e-15 86.7 150 33.3
Zm00001eb097840 Zea mays HOM05D009951 ORTHO05D012391 5.5e-15 86.3 58 77.6
HanXRQChr14g0448581 Helianthus annuus HOM05D006295 ORTHO05D008061 7.2e-15 85.9 247 27.1
HanXRQChr07g0190941 Helianthus annuus HOM05D006295 ORTHO05D008061 9.4e-15 85.5 167 32.3
SGA_v2.0_scaffold11G05878 Striga asiatica HOM05D001576 ORTHO05D000401 9.4e-15 85.5 197 31.0
SGA_v2.0_scaffold239G43990 Striga asiatica HOM05D001576 ORTHO05D000401 9.4e-15 85.5 197 31.0
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 9.4e-15 85.5 189 33.9
Zm00001eb153420 Zea mays HOM05D041251 ORTHO05D037145 2.7e-14 84.0 164 31.7
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 3.6e-14 83.6 222 27.9
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 4.7e-14 83.2 204 29.4
HanXRQChr17g0552731 Helianthus annuus HOM05D006295 ORTHO05D008061 6.1e-14 82.8 157 33.8
EL10Ac2g04164 Beta vulgaris HOM05D016588 ORTHO05D019835 1.0e-13 82.0 262 26.3
Medtr4g063670 Medicago truncatula HOM05D000589 ORTHO05D000401 2.3e-13 80.9 216 32.4
Psat3g071440 Pisum sativum HOM05D000589 ORTHO05D000401 3.0e-13 80.5 260 27.3
Psat7g215720 Pisum sativum HOM05D000589 ORTHO05D000401 3.0e-13 80.5 260 27.3
Psat7g167200 Pisum sativum HOM05D000589 ORTHO05D000401 1.2e-12 78.6 258 27.1
Os11g0282700 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D020947 1.5e-12 78.2 242 29.8
Psat4g220720 Pisum sativum HOM05D000589 ORTHO05D000401 1.5e-12 78.2 258 27.1
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 2.6e-12 77.4 225 26.2
Psat5g257800 Pisum sativum HOM05D000214 ORTHO05D000401 2.6e-12 77.4 215 29.8
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.4e-12 77.0 176 25.6
SGA_v2.0_scaffold167G38458 Striga asiatica HOM05D001576 ORTHO05D000401 4.4e-12 76.6 191 28.8
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.4e-12 76.6 199 27.1
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 5.7e-12 76.3 225 26.2
ECA246G0656 Erigeron canadensis HOM05D006295 ORTHO05D008061 9.8e-12 75.5 165 27.3
HanXRQChr07g0187611 Helianthus annuus HOM05D002473 ORTHO05D002666 9.8e-12 75.5 138 32.6
HanXRQChr12g0358331 Helianthus annuus HOM05D006295 ORTHO05D008061 2.2e-11 74.3 157 31.2
HanXRQChr17g0568671 Helianthus annuus HOM05D032522 ORTHO05D008061 2.2e-11 74.3 157 29.9
ECA246G3121 Erigeron canadensis HOM05D008106 ORTHO05D010314 3.7e-11 73.6 164 27.4
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 3.7e-11 73.6 132 31.1
BolC9t58423H Brassica oleracea HOM05D000589 ORTHO05D000401 4.8e-11 73.2 180 30.0
HanXRQChr01g0005601 Helianthus annuus HOM05D017262 ORTHO05D009814 4.8e-11 73.2 187 28.3
BcaC05g24983 Brassica carinata HOM05D000589 ORTHO05D000401 6.3e-11 72.8 188 29.8
BolC6t36890H Brassica oleracea HOM05D000589 ORTHO05D000401 6.3e-11 72.8 235 26.4
HanXRQChr01g0006531 Helianthus annuus HOM05D001218 ORTHO05D003142 6.3e-11 72.8 206 25.2
HanXRQChr04g0114771 Helianthus annuus HOM05D017262 ORTHO05D009814 6.3e-11 72.8 254 25.2
ECA233G2970 Erigeron canadensis HOM05D006295 ORTHO05D008061 8.3e-11 72.4 179 27.9
HanXRQChr01g0017261 Helianthus annuus HOM05D017262 ORTHO05D009814 8.3e-11 72.4 187 27.8
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 1.1e-10 72.0 178 27.5
Zm00001eb392670 Zea mays HOM05D009951 ORTHO05D012391 1.4e-10 71.6 54 98.1
ECA234G0592 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.8e-10 71.2 174 29.3
ECA248G0467 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.8e-10 71.2 171 30.4
BolC3t20860H Brassica oleracea HOM05D000214 ORTHO05D000131 2.4e-10 70.9 191 27.2
Psat5g094880 Pisum sativum HOM05D000589 ORTHO05D000401 2.4e-10 70.9 183 30.6
ECA233G0808 Erigeron canadensis HOM05D006295 ORTHO05D008061 3.1e-10 70.5 158 28.5
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 3.1e-10 70.5 130 33.1
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 4.1e-10 70.1 198 29.3
ECA233G0912 Erigeron canadensis HOM05D006295 ORTHO05D008061 4.1e-10 70.1 141 31.9
HanXRQChr08g0222911 Helianthus annuus HOM05D006295 ORTHO05D008061 4.1e-10 70.1 126 34.1
HanXRQChr16g0526551 Helianthus annuus HOM05D007803 ORTHO05D007881 4.1e-10 70.1 207 25.6
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.4e-10 69.7 173 27.7
ECA238G2409 Erigeron canadensis HOM05D008106 ORTHO05D010314 5.4e-10 69.7 125 31.2
TWI73G0420 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.4e-10 69.7 160 29.4
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.0e-10 69.3 173 27.7
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.0e-10 69.3 173 27.7
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.0e-10 69.3 173 27.7
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.0e-10 69.3 173 27.7
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.0e-10 69.3 173 27.7
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.0e-10 69.3 173 27.7
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.0e-10 69.3 173 27.7
HanXRQChr01g0013611 Helianthus annuus HOM05D007803 ORTHO05D007881 7.0e-10 69.3 144 26.4
Hund24086 Selenicereus undatus HOM05D000214 ORTHO05D011049 7.0e-10 69.3 216 27.3
SGA_v2.0_scaffold19G08588 Striga asiatica HOM05D001576 ORTHO05D000401 7.0e-10 69.3 192 30.2
ECA234G2140 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.6e-09 68.2 166 27.7
HanXRQChr07g0195981 Helianthus annuus HOM05D007803 ORTHO05D007881 1.6e-09 68.2 190 26.8
PGR142G0706 Punica granatum HOM05D000589 ORTHO05D000401 1.6e-09 68.2 121 34.7
Haze_20229 Corylus avellana HOM05D001576 ORTHO05D000401 2.0e-09 67.8 197 30.5
ECA236G1296 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.0e-09 67.8 156 27.6
ECA247G4060 Erigeron canadensis HOM05D008106 ORTHO05D010314 2.0e-09 67.8 173 28.3
Psat7g219080 Pisum sativum HOM05D000589 ORTHO05D000401 2.0e-09 67.8 150 31.3
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.7e-09 67.4 119 29.4
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.5e-09 67.0 173 27.2
CANSAT01G3197 Cannabis sativa HOM05D001576 ORTHO05D010219 3.5e-09 67.0 188 26.1
ECA240G0948 Erigeron canadensis HOM05D008106 ORTHO05D010314 3.5e-09 67.0 166 29.5
ECA234G4604 Erigeron canadensis HOM05D006295 ORTHO05D008061 5.9e-09 66.2 236 28.0
FvH4_3g31921 Fragaria vesca HOM05D001576 ORTHO05D000401 5.9e-09 66.2 191 25.7
Medtr3g069460 Medicago truncatula HOM05D000589 ORTHO05D000401 1.0e-08 65.5 138 32.6
ECA232G4162 Erigeron canadensis HOM05D008106 ORTHO05D010314 2.9e-08 63.9 141 27.7
ECA248G1052 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.9e-08 63.9 194 28.4
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 2.9e-08 63.9 275 25.8
CiPaw.07G178300 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.8e-08 63.5 188 27.7
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 5.0e-08 63.2 140 27.9
ECA234G2890 Erigeron canadensis HOM05D008106 ORTHO05D010314 5.0e-08 63.2 131 29.0
Medtr1g106885 Medicago truncatula HOM05D006550 ORTHO05D008630 5.0e-08 63.2 186 24.7
Medtr2g022120 Medicago truncatula HOM05D006550 ORTHO05D008630 5.0e-08 63.2 186 24.7
Medtr3g067785 Medicago truncatula HOM05D006550 ORTHO05D008630 5.0e-08 63.2 186 24.7
Medtr4g013220 Medicago truncatula HOM05D006550 ORTHO05D008630 5.0e-08 63.2 186 24.7
Medtr4g026120 Medicago truncatula HOM05D006550 ORTHO05D008630 5.0e-08 63.2 186 24.7
Medtr4g036435 Medicago truncatula HOM05D006550 ORTHO05D008630 5.0e-08 63.2 186 24.7
Medtr5g066280 Medicago truncatula HOM05D006550 ORTHO05D008630 5.0e-08 63.2 186 24.7
ECA232G3958 Erigeron canadensis HOM05D008106 ORTHO05D010314 6.6e-08 62.8 148 30.4
ECA238G3572 Erigeron canadensis HOM05D008106 ORTHO05D010314 6.6e-08 62.8 141 27.7
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 6.6e-08 62.8 272 25.7
ECA238G2218 Erigeron canadensis HOM05D006295 ORTHO05D008061 8.6e-08 62.4 116 31.0
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 1.1e-07 62.0 199 27.6
QL09p040841 Quercus lobata HOM05D001576 ORTHO05D000401 1.1e-07 62.0 187 27.8
TWI53G0863 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.1e-07 62.0 135 26.7
ECA233G2222 Erigeron canadensis HOM05D008106 ORTHO05D010314 1.5e-07 61.6 173 27.2
CiPaw.01G033500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-07 61.2 188 27.7
CiPaw.07G147000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-07 61.2 188 27.7
CiPaw.03G069900 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.5e-07 60.8 184 27.2
ECA234G4753 Erigeron canadensis HOM05D008106 ORTHO05D010314 2.5e-07 60.8 173 27.7
ECA238G2436 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.5e-07 60.8 174 25.9
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 2.5e-07 60.8 175 27.4
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 2.5e-07 60.8 175 27.4
HanXRQChr04g0121201 Helianthus annuus HOM05D006295 ORTHO05D008061 3.3e-07 60.5 161 24.8
QL06p053821 Quercus lobata HOM05D001576 ORTHO05D000401 3.3e-07 60.5 111 27.0
Medtr5g077245 Medicago truncatula HOM05D006550 ORTHO05D008630 4.2e-07 60.1 186 24.2
QL09p033218 Quercus lobata HOM05D001576 ORTHO05D000401 4.2e-07 60.1 182 26.9
CiPaw.10G028800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.5e-07 59.7 188 27.1
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 5.5e-07 59.7 175 27.4
ECA233G4921 Erigeron canadensis HOM05D006295 ORTHO05D008061 7.2e-07 59.3 170 27.1
TWI56G0638 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 7.2e-07 59.3 123 27.6
CiPaw.16G070300 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.5e-07 58.9 188 28.2
ECA233G4829 Erigeron canadensis HOM05D006295 ORTHO05D008061 9.5e-07 58.9 136 26.5
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 9.5e-07 58.9 170 26.5
TWI23G0178 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 9.5e-07 58.9 123 27.6
TWI56G0559 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 9.5e-07 58.9 123 27.6
TWI74G1447 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 9.5e-07 58.9 129 27.9
HanXRQChr02g0052081 Helianthus annuus HOM05D006295 ORTHO05D008061 1.2e-06 58.5 161 24.2
ECA238G2971 Erigeron canadensis HOM05D008491 ORTHO05D007255 1.6e-06 58.2 115 31.3
Medtr1g051185 Medicago truncatula HOM05D000589 ORTHO05D000401 2.1e-06 57.8 155 32.3
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 2.1e-06 57.8 170 27.1
CSS0002566 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-06 57.4 111 30.6
CSS0006860 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-06 57.4 111 30.6
CSS0012194 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-06 57.4 111 30.6
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 2.8e-06 57.4 187 28.3
CiPaw.01G060300 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.8e-06 57.4 125 28.8
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 3.6e-06 57.0 187 27.8
CSS0010386 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.7e-06 56.6 111 30.6
Dinv07939 Davidia involucrata HOM05D001576 ORTHO05D000401 4.7e-06 56.6 162 28.4
ECA240G3034 Erigeron canadensis HOM05D008491 ORTHO05D007255 4.7e-06 56.6 108 32.4
HanXRQChr10g0295321 Helianthus annuus HOM05D006295 ORTHO05D008061 4.7e-06 56.6 97 34.0
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 4.7e-06 56.6 104 32.7
CiPaw.10G126200 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.0e-06 55.8 176 26.1


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