Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 2.7e-140 501.9 240 100.0
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 8.6e-62 241.1 197 57.9
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 3.3e-61 239.2 205 56.6
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 4.3e-61 238.8 197 58.4
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 7.3e-61 238.0 226 52.7
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 9.6e-61 237.7 219 56.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 1.6e-60 236.9 200 57.5
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 3.6e-60 235.7 196 57.7
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 3.6e-60 235.7 182 59.9
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 6.2e-60 235.0 182 59.3
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 6.2e-60 235.0 195 57.9
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 8.1e-60 234.6 212 53.8
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.1e-59 234.2 215 55.3
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.1e-59 234.2 200 58.5
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.1e-59 234.2 208 53.8
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 1.8e-59 233.4 198 58.1
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 2.4e-59 233.0 182 61.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 3.1e-59 232.6 201 55.7
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 4.0e-59 232.3 197 56.9
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 4.0e-59 232.3 197 57.9
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 4.0e-59 232.3 199 56.3
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 5.2e-59 231.9 203 55.2
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.0e-58 229.9 207 55.6
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 2.0e-58 229.9 206 54.9
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 2.0e-58 229.9 188 55.3
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 2.6e-58 229.6 199 57.3
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 2.6e-58 229.6 196 54.6
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.6e-58 229.6 200 56.5
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 2.6e-58 229.6 197 55.8
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 4.4e-58 228.8 200 57.5
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 5.8e-58 228.4 197 55.8
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 9.9e-58 227.6 206 54.4
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 1.3e-57 227.3 197 56.3
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 1.7e-57 226.9 203 54.7
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.7e-57 226.9 200 57.0
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.7e-57 226.9 183 59.0
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.2e-57 226.5 205 55.6
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.2e-57 226.5 204 52.0
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.2e-57 226.5 200 55.5
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 2.9e-57 226.1 205 54.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 4.9e-57 225.3 206 52.4
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 5.4e-56 221.9 225 52.4
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 9.3e-56 221.1 203 54.7
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 1.2e-55 220.7 199 54.3
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 2.1e-55 219.9 198 53.5
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.1e-55 219.9 199 55.3
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 6.0e-55 218.4 197 53.3
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 7.8e-55 218.0 182 57.7
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 7.8e-55 218.0 234 47.4
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 3.9e-54 215.7 234 47.9
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.1e-53 214.2 182 56.6
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 1.1e-53 214.2 208 51.9
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.5e-53 213.8 201 50.7
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 1.9e-53 213.4 203 52.7
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.9e-53 213.4 202 50.5
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.9e-53 213.4 180 56.7
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 3.3e-53 212.6 200 52.5
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 3.3e-53 212.6 200 52.5
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 4.3e-53 212.2 183 56.3
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 7.3e-53 211.5 200 53.0
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.3e-53 211.5 174 56.3
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 1.3e-52 210.7 180 55.0
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.6e-52 210.3 182 55.5
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.6e-52 210.3 180 55.6
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 4.8e-52 208.8 180 55.6
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 4.8e-52 208.8 180 55.6
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 4.8e-52 208.8 198 53.5
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 8.1e-52 208.0 243 45.7
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 8.1e-52 208.0 201 51.2
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.8e-51 206.8 221 48.9
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 5.3e-51 205.3 221 47.1
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 5.3e-51 205.3 190 52.6
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.2e-50 204.1 217 50.2
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.3e-49 200.7 212 49.5
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 9.3e-48 194.5 205 48.3
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 3.5e-47 192.6 148 59.5
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 6.0e-47 191.8 182 54.9
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 6.0e-47 191.8 203 48.8
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 1.0e-46 191.0 189 50.8
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 3.9e-46 189.1 182 52.7
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 2.5e-45 186.4 200 46.5
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 4.8e-44 182.2 227 44.5
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.8e-44 182.2 219 46.6
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 2.0e-42 176.8 131 66.4
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 4.6e-39 165.6 256 37.9
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 1.0e-38 164.5 208 40.4
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 1.5e-37 160.6 149 53.0
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 3.3e-37 159.5 198 44.4
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 3.3e-37 159.5 184 45.7
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 5.6e-37 158.7 220 40.0
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 7.4e-37 158.3 144 50.0
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.8e-36 156.4 247 39.3
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.2e-34 151.0 210 43.3
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 9.3e-32 141.4 119 53.8
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 1.3e-30 137.5 227 37.9
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 6.7e-30 135.2 105 59.0
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.6e-28 130.6 209 34.9
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 4.8e-28 129.0 98 58.2
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 5.3e-27 125.6 205 37.1
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 5.3e-27 125.6 85 68.2
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 5.3e-27 125.6 102 55.9
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 6.5e-25 118.6 199 34.2
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 8.5e-25 118.2 153 43.8
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 2.4e-19 100.1 144 38.9
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.9e-15 85.1 59 67.8
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 1.1e-11 74.7 65 55.4
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 1.8e-11 73.9 53 64.2
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.2e-07 61.2 79 35.4
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 6.7e-06 55.5 106 29.2


User provided reference genes

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