Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 7.4e-178 627.1 318 100.0
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 2.3e-38 163.7 272 43.4
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 8.8e-38 161.8 315 40.6
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.2e-34 151.4 226 45.6
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 1.3e-33 147.9 312 36.9
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 1.6e-31 141.0 226 43.4
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 2.1e-31 140.6 267 40.4
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 6.1e-31 139.0 231 45.0
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 4.0e-30 136.3 227 44.5
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 1.2e-29 134.8 226 44.2
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 2.0e-29 134.0 229 39.3
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 3.4e-29 133.3 229 44.1
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 7.5e-29 132.1 236 43.2
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 1.3e-28 131.3 224 43.3
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 1.3e-28 131.3 315 36.2
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.2e-28 130.6 236 39.8
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 2.8e-28 130.2 226 42.0
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 4.9e-28 129.4 163 52.1
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 4.9e-28 129.4 163 52.1
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 4.9e-28 129.4 226 42.0
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 6.3e-28 129.0 225 41.8
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 6.3e-28 129.0 261 39.1
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 4.1e-27 126.3 226 41.6
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 4.1e-27 126.3 226 41.6
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 4.1e-27 126.3 234 41.0
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 5.4e-27 125.9 225 40.9
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 5.4e-27 125.9 225 40.9
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 5.4e-27 125.9 226 41.2
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 5.4e-27 125.9 283 36.7
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 5.4e-27 125.9 158 50.6
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 7.0e-27 125.6 234 41.0
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 7.0e-27 125.6 315 36.8
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 7.0e-27 125.6 249 39.8
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.2e-26 124.8 315 36.8
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 1.2e-26 124.8 277 39.0
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 1.2e-26 124.8 318 37.4
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 1.6e-26 124.4 159 46.5
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 1.6e-26 124.4 276 39.9
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 2.0e-26 124.0 225 42.2
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 2.0e-26 124.0 315 36.8
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 2.7e-26 123.6 224 42.4
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 2.7e-26 123.6 213 43.2
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 4.5e-26 122.9 226 39.4
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 5.9e-26 122.5 234 41.5
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 7.8e-26 122.1 226 39.8
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 1.3e-25 121.3 276 37.0
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 2.3e-25 120.6 169 49.1
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 2.3e-25 120.6 278 38.8
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 2.3e-25 120.6 220 41.8
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 2.9e-25 120.2 228 38.6
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 2.9e-25 120.2 236 41.1
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.9e-25 120.2 160 48.1
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 3.9e-25 119.8 264 37.1
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 5.0e-25 119.4 232 39.7
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 6.6e-25 119.0 295 37.3
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 6.6e-25 119.0 231 41.6
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 8.6e-25 118.6 204 41.7
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.5e-24 117.9 249 39.4
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 1.5e-24 117.9 166 48.2
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 1.5e-24 117.9 223 39.0
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 1.9e-24 117.5 160 46.9
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 2.5e-24 117.1 249 39.4
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 2.5e-24 117.1 198 43.4
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 9.5e-24 115.2 226 38.9
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.2e-23 114.8 249 39.0
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 1.6e-23 114.4 242 37.6
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 2.1e-23 114.0 235 36.6
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 2.8e-23 113.6 254 39.0
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 3.6e-23 113.2 214 39.7
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 8.0e-23 112.1 252 39.7
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 8.0e-23 112.1 252 39.7
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 1.0e-22 111.7 170 44.7
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 1.4e-22 111.3 182 44.0
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.4e-22 111.3 300 34.7
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.4e-22 111.3 227 37.0
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 5.2e-22 109.4 166 45.8
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 5.2e-22 109.4 227 35.2
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 6.8e-22 109.0 176 42.6
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 1.2e-21 108.2 226 38.5
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 1.5e-21 107.8 222 37.4
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 1.3e-20 104.8 297 33.0
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 1.3e-20 104.8 297 33.0
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 1.3e-20 104.8 228 36.0
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 1.3e-20 104.8 164 42.7
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.7e-20 104.4 164 40.2
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 2.2e-20 104.0 257 33.5
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 4.9e-20 102.8 226 36.3
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 8.3e-20 102.1 166 42.2
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 1.4e-19 101.3 226 35.4
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 2.4e-19 100.5 159 44.7
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 3.2e-19 100.1 158 38.6
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 4.6e-18 96.3 237 35.4
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 3.0e-17 93.6 226 36.3
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 3.9e-17 93.2 170 40.6
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 5.0e-17 92.8 209 36.4
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 8.0e-15 85.5 111 48.6
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 7.5e-13 79.0 196 35.7
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.7e-10 70.5 123 40.7
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 3.5e-10 70.1 145 35.9
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.5e-08 64.7 78 51.3
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.5e-08 64.7 78 51.3


User provided reference genes

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