Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb127560 Zea mays HOM05D004199 ORTHO05D005905 4.5e-171 604.7 364 100.0
Zm00001eb064800 Zea mays HOM05D004199 ORTHO05D005905 3.5e-83 312.8 258 73.3
Os03g0853700 Oryza sativa ssp. japonica HOM05D004199 ORTHO05D005905 6.3e-40 169.1 260 46.9
Zm00001eb323900 Zea mays HOM05D004199 ORTHO05D005905 1.5e-28 131.3 98 70.4
Zm00001eb323890 Zea mays HOM05D004199 ORTHO05D005905 2.2e-24 117.5 64 95.3
HPP92_022758 Vanilla planifolia HOM05D004199 ORTHO05D005905 2.0e-17 94.4 239 33.1
Phvul.001G030200 Phaseolus vulgaris HOM05D004199 ORTHO05D005905 2.1e-11 74.3 233 31.3
VMungo1383G0908 Vigna mungo HOM05D004199 ORTHO05D005905 6.2e-11 72.8 235 31.9
Glyma.20G028100 Glycine max HOM05D004199 ORTHO05D005905 1.4e-10 71.6 238 30.3
CAN.G184.89 Capsicum annuum HOM05D004199 ORTHO05D005905 3.1e-10 70.5 224 29.9
Glyma.07G227400 Glycine max HOM05D004199 ORTHO05D005905 3.1e-10 70.5 236 29.7
Psat2g189000 Pisum sativum HOM05D004199 ORTHO05D005905 5.2e-10 69.7 236 30.9
AUR62044199 Chenopodium quinoa HOM05D004199 ORTHO05D005905 8.9e-10 68.9 236 31.8
AUR62033048 Chenopodium quinoa HOM05D004199 ORTHO05D005905 3.4e-09 67.0 240 31.7
GSVIVG01011955001 Vitis vinifera HOM05D004199 ORTHO05D005905 4.4e-09 66.6 212 30.7
Lj3g0002767 Lotus japonicus HOM05D004199 ORTHO05D005905 1.3e-08 65.1 236 28.4
Ca_25946_v3 Cicer arietinum L. HOM05D004199 ORTHO05D005905 7.1e-07 59.3 240 30.0
Sed0023765 Sechium edule HOM05D004199 ORTHO05D005905 7.1e-07 59.3 246 31.3
ATR0665G261 Amborella trichopoda HOM05D004199 ORTHO05D005905 9.2e-07 58.9 241 27.8
EL10Ac9g22638 Beta vulgaris HOM05D004199 ORTHO05D005905 9.2e-07 58.9 249 29.3
CsaV3_5G033970 Cucumis sativus L. HOM05D004199 ORTHO05D005905 9.2e-07 58.9 255 30.6
Oeu041360.1 Olea europaea HOM05D004199 ORTHO05D005905 9.2e-07 58.9 291 26.5
RcHm_v2.0_Chr4g0435851 Rosa chinensis HOM05D004199 ORTHO05D005905 9.2e-07 58.9 238 29.0
PSO801G0529 Papaver somniferum HOM05D004199 ORTHO05D005905 1.6e-06 58.2 236 30.1
ECA234G0057 Erigeron canadensis HOM05D004199 ORTHO05D005905 2.7e-06 57.4 212 37.3
QL01p046262 Quercus lobata HOM05D004199 ORTHO05D005905 4.6e-06 56.6 193 29.5
Sc17g0004690 Simmondsia chinensis HOM05D004199 ORTHO05D005905 4.6e-06 56.6 258 27.9
MELO3C012214.2 Cucumis melo HOM05D004199 ORTHO05D005905 6.0e-06 56.2 256 30.5
Glyma.07G155300 Glycine max HOM05D004199 ORTHO05D005905 6.0e-06 56.2 239 28.9
MD16G1048400 Malus domestica HOM05D004199 ORTHO05D005905 7.8e-06 55.8 249 28.1


User provided reference genes

Program Settings