Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb123970 Zea mays HOM05D067512 ORTHO05D050092 1.1e-182 644.8 367 100.0
Os01g0153250 Oryza sativa ssp. japonica HOM05D067512 ORTHO05D050092 2.3e-52 211.8 197 72.6
PSO339G3988 Papaver somniferum HOM05D007212 ORTHO05D009094 9.2e-17 93.6 264 29.2
Migut.G01143 Erythranthe guttata HOM05D007212 ORTHO05D009094 1.1e-14 86.7 273 30.8
Migut.G01107 Erythranthe guttata HOM05D007212 ORTHO05D009094 3.3e-14 85.1 133 39.1
arahy.Tifrunner.gnm1.ann1.C93D89 Arachis hypogaea HOM05D007212 ORTHO05D009094 1.2e-13 83.2 260 30.8
Migut.D02115 Erythranthe guttata HOM05D007212 ORTHO05D009094 1.6e-13 82.8 271 30.6
FAN21G0605 Fragaria x ananassa HOM05D007212 ORTHO05D009094 3.6e-13 81.6 115 37.4
Phvul.011G027200 Phaseolus vulgaris HOM05D007212 ORTHO05D009094 6.2e-13 80.9 260 29.2
Psat7g177640 Pisum sativum HOM05D007212 ORTHO05D009094 1.1e-12 80.1 260 29.6
arahy.Tifrunner.gnm1.ann1.0V2A2H Arachis hypogaea HOM05D007212 ORTHO05D009094 1.4e-12 79.7 260 30.0
Lalb_Chr01g0001381 Lupinus albus HOM05D007212 ORTHO05D009094 1.4e-12 79.7 260 30.0
Potri.001G236800 Populus trichocarpa HOM05D007212 ORTHO05D009094 3.1e-12 78.6 263 29.3
DCAR_015608 Daucus carota HOM05D007212 ORTHO05D009094 4.0e-12 78.2 260 28.5
TPR.G17150 Trifolium pratense HOM05D007212 ORTHO05D009094 4.0e-12 78.2 260 28.1
Medtr4g075270 Medicago truncatula HOM05D007212 ORTHO05D009094 5.8e-11 74.3 260 28.5
FAN03G3455 Fragaria x ananassa HOM05D007212 ORTHO05D009094 1.3e-10 73.2 116 33.6
Lj3g0025740 Lotus japonicus HOM05D007212 ORTHO05D009094 1.3e-10 73.2 287 28.9
Oeu041026.1 Olea europaea HOM05D007212 ORTHO05D009094 2.2e-10 72.4 257 28.8
ATR0580G451 Amborella trichopoda HOM05D007212 ORTHO05D009094 6.4e-10 70.9 259 29.3
Ca_19008_v3 Cicer arietinum L. HOM05D007212 ORTHO05D009094 1.4e-09 69.7 95 38.9
vmacro19175 Vaccinium macrocarpon HOM05D005764 ORTHO05D006600 1.2e-08 66.6 125 32.8
Eucgr.J02064 Eucalyptus grandis HOM05D007212 ORTHO05D009094 2.1e-08 65.9 137 32.1
AUR62040786 Chenopodium quinoa HOM05D001653 ORTHO05D001751 2.7e-08 65.5 249 30.1
HanXRQChr08g0227881 Helianthus annuus HOM05D007212 ORTHO05D009094 2.7e-08 65.5 266 28.2
SalBow3G0666 Salvia bowleyana HOM05D000162 ORTHO05D000090 7.8e-08 63.9 89 37.1
SalBow3G0952 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.3e-07 63.2 115 31.3
Sc09g0001880 Simmondsia chinensis HOM05D007212 ORTHO05D009094 6.6e-07 60.8 253 28.1
Cpa.g.sc190.19 Carica papaya HOM05D007212 ORTHO05D009094 8.7e-07 60.5 102 33.3
SalBow3G0344 Salvia bowleyana HOM05D000162 ORTHO05D000090 8.7e-07 60.5 115 30.4
FAN06G0240 Fragaria x ananassa HOM05D007212 ORTHO05D009094 1.1e-06 60.1 75 37.3
COL.COLO4_17527 Corchorus olitorius HOM05D000891 ORTHO05D008746 2.5e-06 58.9 94 37.2
FAN03G0763 Fragaria x ananassa HOM05D007212 ORTHO05D009094 2.5e-06 58.9 74 36.5
Lj1C797T15 Lonicera japonica HOM05D005764 ORTHO05D006600 3.3e-06 58.5 86 34.9
Lj1C797T16 Lonicera japonica HOM05D005764 ORTHO05D006600 3.3e-06 58.5 86 34.9
MD11G1144200 Malus domestica HOM05D007212 ORTHO05D009094 4.3e-06 58.2 255 26.3
SalBow3G0436 Salvia bowleyana HOM05D007212 ORTHO05D009094 4.3e-06 58.2 242 26.9
SalBow3G1046 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.6e-06 57.8 125 30.4
SalBow3G2234 Salvia bowleyana HOM05D000162 ORTHO05D000090 5.6e-06 57.8 115 31.3
SalBow3G0742 Salvia bowleyana HOM05D000162 ORTHO05D000090 7.3e-06 57.4 115 31.3
SalBow3G1003 Salvia bowleyana HOM05D000162 ORTHO05D000090 7.3e-06 57.4 115 30.4
SalBow3G3813 Salvia bowleyana HOM05D000162 ORTHO05D000090 7.3e-06 57.4 115 31.3
SalBow3G4567 Salvia bowleyana HOM05D000162 ORTHO05D000090 7.3e-06 57.4 115 31.3
CSS0009024 Camellia sinensis var. sinensis HOM05D007956 ORTHO05D009038 9.6e-06 57.0 112 29.5
QL01p032998 Quercus lobata HOM05D007212 ORTHO05D009094 9.6e-06 57.0 42 57.1


User provided reference genes

Program Settings