Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb123550 Zea mays HOM05D001338 ORTHO05D001239 9.6e-112 406.8 193 100.0
Zm00001eb152380 Zea mays HOM05D001338 ORTHO05D001239 1.4e-110 402.9 193 99.0
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 4.9e-108 394.4 193 97.4
Zm00001eb109540 Zea mays HOM05D001338 ORTHO05D001239 3.1e-94 348.6 164 99.4
Zm00001eb125380 Zea mays HOM05D001338 ORTHO05D001239 3.1e-94 348.6 164 99.4
Zm00001eb027500 Zea mays HOM05D001338 ORTHO05D001239 4.8e-47 191.8 174 57.5
BolC2t08893H Brassica oleracea HOM05D001338 ORTHO05D001239 4.5e-45 185.3 186 47.8
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 5.7e-40 168.3 194 43.3
Oeu003234.1 Olea europaea HOM05D001338 ORTHO05D001239 5.0e-36 155.2 194 40.7
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 1.9e-35 153.3 117 59.0
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 1.6e-34 150.2 204 41.7
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 2.1e-34 149.8 197 42.6
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.0e-33 146.0 197 41.6
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 4.0e-33 145.6 172 45.3
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.7e-32 141.7 197 41.1
Zm00001eb204510 Zea mays HOM05D001338 ORTHO05D001239 1.3e-31 140.6 62 96.8
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 3.7e-31 139.0 202 39.6
ECA232G0049 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.2e-29 134.0 207 41.5
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-29 133.7 203 40.4
FvH4_6g47642 Fragaria vesca HOM05D001338 ORTHO05D001239 7.8e-29 131.3 198 37.4
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 1.0e-28 131.0 217 38.2
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 3.9e-28 129.0 217 37.8
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 3.9e-28 129.0 197 39.1
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-27 127.5 179 40.2
Medtr4g010145 Medicago truncatula HOM05D001338 ORTHO05D016692 1.9e-27 126.7 211 38.9
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 2.5e-27 126.3 201 39.8
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.3e-27 125.6 124 46.8
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 9.5e-27 124.4 245 37.1
PSO384G1931 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-26 124.0 219 38.8
PSO801G0142 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-26 123.6 216 38.0
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-26 123.2 200 37.0
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.8e-26 122.9 186 36.6
Oeu063134.1 Olea europaea HOM05D001338 ORTHO05D001239 3.6e-26 122.5 198 36.4
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-26 122.1 117 45.3
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-26 122.1 117 45.3
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 6.1e-26 121.7 187 36.4
MD02G1227000 Malus domestica HOM05D000696 ORTHO05D001239 1.4e-25 120.6 124 48.4
PSO781G0216 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-25 120.2 117 44.4
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 3.1e-25 119.4 93 60.2
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 3.1e-25 119.4 93 60.2
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 4.0e-25 119.0 202 37.6
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-25 118.6 95 54.7
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-25 118.6 95 54.7
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-25 118.6 95 54.7
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-25 118.6 95 54.7
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 6.8e-25 118.2 218 36.2
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-25 117.9 95 54.7
Oeu056073.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-24 117.5 198 34.8
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-24 117.5 96 51.0
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 1.5e-24 117.1 117 44.4
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 2.0e-24 116.7 97 52.6
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-24 116.7 116 44.0
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 2.0e-24 116.7 221 36.7
PSO478G0924 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-24 116.3 100 53.0
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 2.6e-24 116.3 95 53.7
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 3.4e-24 115.9 129 45.0
PSO063G4981 Papaver somniferum HOM05D001338 ORTHO05D001239 4.4e-24 115.5 95 53.7
Glyma.12G093566 Glycine max HOM05D001338 ORTHO05D001239 7.5e-24 114.8 80 63.8
PSO339G3749 Papaver somniferum HOM05D001338 ORTHO05D001239 7.5e-24 114.8 214 34.6
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 9.8e-24 114.4 218 36.7
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-23 114.0 218 37.2
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-23 113.6 240 35.8
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 2.9e-23 112.8 111 46.8
ECA236G1638 Erigeron canadensis HOM05D001338 ORTHO05D001239 3.7e-23 112.5 210 33.8
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.7e-23 112.5 196 37.2
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 4.9e-23 112.1 98 51.0
AL4G20870 Arabidopsis lyrata HOM05D001338 ORTHO05D001239 8.3e-23 111.3 231 35.5
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 8.3e-23 111.3 93 52.7
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.1e-22 110.9 87 56.3
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.1e-22 110.9 97 51.5
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 1.9e-22 110.2 200 34.5
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-22 109.8 124 42.7
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-22 109.8 98 50.0
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.2e-22 109.4 97 50.5
PSO832G0837 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-22 109.0 195 35.4
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 1.2e-21 107.5 106 51.9
PSO782G2576 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-21 107.5 96 55.2
FvH4_2g32571 Fragaria vesca HOM05D001338 ORTHO05D001239 1.6e-21 107.1 98 49.0
RcHm_v2.0_Chr7g0230921 Rosa chinensis HOM05D001338 ORTHO05D029707 1.6e-21 107.1 191 34.6
Aqoxy5G02339 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 2.7e-21 106.3 98 50.0
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.5e-21 105.9 168 37.5
Zm00001eb311200 Zea mays HOM05D001338 ORTHO05D001239 3.5e-21 105.9 136 50.7
PSO724G0974 Papaver somniferum HOM05D001338 ORTHO05D001239 4.6e-21 105.5 216 32.9
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 6.0e-21 105.1 115 47.0
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 6.0e-21 105.1 202 34.2
PSO138G0010 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-21 104.8 102 49.0
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-21 104.8 92 51.1
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 1.0e-20 104.4 74 56.8
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-20 104.0 139 43.2
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 1.7e-20 103.6 196 30.6
Oeu048409.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-20 103.6 110 43.6
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 3.0e-20 102.8 104 45.2
Medtr5g056540 Medicago truncatula HOM05D001338 ORTHO05D001239 3.9e-20 102.4 200 32.5
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 3.9e-20 102.4 111 42.3
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 1.1e-19 100.9 97 48.5
CANSAT11G0800 Cannabis sativa HOM05D001338 ORTHO05D001239 1.5e-19 100.5 127 41.7
CANSAT01G1009 Cannabis sativa HOM05D001338 ORTHO05D001239 2.5e-19 99.8 97 49.5
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 3.3e-19 99.4 135 40.0
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 3.3e-19 99.4 192 35.4
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 5.6e-19 98.6 219 32.0
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.6e-19 98.6 222 32.0
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 1.2e-18 97.4 111 40.5
Sp4g09900 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.2e-18 97.4 128 40.6
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-18 96.7 118 44.1
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-18 96.7 193 35.8
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 4.7e-18 95.5 118 38.1
RcHm_v2.0_Chr6g0308901 Rosa chinensis HOM05D001338 ORTHO05D001239 6.2e-18 95.1 80 53.8
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.1e-17 94.4 152 34.2
PSO541G5408 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-17 93.2 79 53.2
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 3.1e-17 92.8 96 46.9
CARHR103200 Cardamine hirsuta HOM05D001338 ORTHO05D001239 4.0e-17 92.4 140 35.0
Medtr7g446190 Medicago truncatula HOM05D000132 ORTHO05D000058 9.8e-16 87.8 107 46.7
Oeu064839.1 Olea europaea HOM05D001338 ORTHO05D001239 9.8e-16 87.8 60 55.0
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-15 87.0 83 49.4
PSO832G0893 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-15 87.0 187 34.2
Oeu005280.1 Olea europaea HOM05D001338 ORTHO05D001239 3.7e-15 85.9 87 44.8
PSO461G0028 Papaver somniferum HOM05D001338 ORTHO05D001239 2.4e-14 83.2 203 29.6
Oeu053421.1 Olea europaea HOM05D001338 ORTHO05D001239 4.6e-13 79.0 88 44.3
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 7.8e-13 78.2 213 28.2
CiPaw.15G122600 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.0e-12 77.8 65 53.8
FvH4_7g07902 Fragaria vesca HOM05D001338 ORTHO05D001239 3.0e-12 76.3 69 49.3
Oeu034167.1 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-12 76.3 59 55.9
RcHm_v2.0_Chr3g0452101 Rosa chinensis HOM05D001338 ORTHO05D001239 1.1e-11 74.3 144 34.7
Ah.06g184850 Amaranthus hybridus HOM05D002284 ORTHO05D002427 1.5e-11 73.9 155 33.5
CANSAT46G0001 Cannabis sativa HOM05D001338 ORTHO05D001239 4.3e-11 72.4 127 35.4
Oeu025447.1 Olea europaea HOM05D001338 ORTHO05D001239 1.6e-10 70.5 132 31.8
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.5e-08 63.9 96 36.5
Oeu023192.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-07 60.5 49 49.0
Sp1g32380 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.7e-07 60.5 166 29.5
Zm00001eb395820 Zea mays HOM05D001338 ORTHO05D001239 1.7e-07 60.5 103 37.9
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 2.2e-07 60.1 46 54.3
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 6.4e-07 58.5 46 56.5
ECA232G4407 Erigeron canadensis HOM05D001338 ORTHO05D001239 1.9e-06 57.0 134 36.6
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.9e-06 57.0 42 57.1
Oeu049829.1 Olea europaea HOM05D001338 ORTHO05D001239 4.1e-06 55.8 65 43.1
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 9.2e-06 54.7 61 45.9
RcHm_v2.0_Chr2g0139641 Rosa chinensis HOM05D058291 ORTHO05D029707 9.2e-06 54.7 127 35.4


User provided reference genes

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