Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb122800 Zea mays HOM05D007295 ORTHO05D007705 1.6e-99 365.9 169 100.0
Zm00001eb386100 Zea mays HOM05D007295 ORTHO05D007705 4.5e-65 251.5 129 92.2
Zm00001eb020010 Zea mays HOM05D007295 ORTHO05D007705 2.6e-52 209.1 124 74.2
Zm00001eb090020 Zea mays HOM05D007295 ORTHO05D007705 3.3e-52 208.8 127 70.1
Zm00001eb035520 Zea mays HOM05D011105 ORTHO05D007705 7.5e-52 207.6 127 69.3
Zm00001eb180120 Zea mays HOM05D007295 ORTHO05D007705 1.3e-51 206.8 127 69.3
Zm00001eb338830 Zea mays HOM05D007295 ORTHO05D007705 1.7e-40 169.9 127 58.3
Zm00001eb274350 Zea mays HOM05D007295 ORTHO05D007705 3.3e-39 165.6 122 59.0
Zm00001eb236750 Zea mays HOM05D007295 ORTHO05D007705 4.2e-39 165.2 122 59.0
Zm00001eb121750 Zea mays HOM05D007295 ORTHO05D007705 9.5e-39 164.1 127 57.5
Zm00001eb375080 Zea mays HOM05D007295 ORTHO05D007705 1.2e-38 163.7 122 58.2
Zm00001eb373830 Zea mays HOM05D007295 ORTHO05D007705 4.7e-38 161.8 123 56.9
Zm00001eb385640 Zea mays HOM05D007295 ORTHO05D007705 1.8e-34 149.8 127 50.4
Zm00001eb136260 Zea mays HOM05D007295 ORTHO05D007705 2.4e-34 149.4 124 52.4
Zm00001eb045190 Zea mays HOM05D007295 ORTHO05D007705 7.8e-33 144.4 127 49.6
Zm00001eb211670 Zea mays HOM05D007295 ORTHO05D007705 1.6e-30 136.7 150 42.7
Zm00001eb197800 Zea mays HOM05D007295 ORTHO05D007705 3.6e-30 135.6 150 42.7
Zm00001eb279690 Zea mays HOM05D007295 ORTHO05D007705 6.1e-30 134.8 150 42.7
Zm00001eb046270 Zea mays HOM05D007295 ORTHO05D007705 1.4e-29 133.7 123 46.3
Zm00001eb087940 Zea mays HOM05D007295 ORTHO05D007705 1.4e-29 133.7 123 46.3
Zm00001eb242210 Zea mays HOM05D007295 ORTHO05D007705 1.4e-29 133.7 123 46.3
Zm00001eb389250 Zea mays HOM05D007295 ORTHO05D007705 1.4e-29 133.7 123 46.3
Zm00001eb004080 Zea mays HOM05D007295 ORTHO05D007705 1.2e-28 130.6 118 48.3
Zm00001eb015410 Zea mays HOM05D007295 ORTHO05D007705 1.3e-27 127.1 123 45.5
Os12g0299650 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 6.4e-27 124.8 125 43.2
Zm00001eb113300 Zea mays HOM05D007295 ORTHO05D007705 6.4e-27 124.8 123 44.7
Os01g0894050 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 1.1e-26 124.0 125 43.2
Os05g0218001 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 1.1e-26 124.0 125 43.2
Os06g0481800 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 1.4e-26 123.6 125 42.4
Os02g0813200 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 2.4e-26 122.9 123 43.1
Zm00001eb018820 Zea mays HOM05D007295 ORTHO05D007705 2.0e-25 119.8 124 39.5
Os06g0595700 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 1.0e-24 117.5 123 42.3
Zm00001eb090610 Zea mays HOM05D007295 ORTHO05D007705 1.0e-24 117.5 124 39.5
Zm00001eb019020 Zea mays HOM05D007295 ORTHO05D007705 2.3e-24 116.3 124 38.7
Zm00001eb384140 Zea mays HOM05D007295 ORTHO05D007705 2.3e-24 116.3 104 47.1
Zm00001eb300210 Zea mays HOM05D007295 ORTHO05D007705 8.6e-24 114.4 118 44.1
Zm00001eb086590 Zea mays HOM05D007295 ORTHO05D007705 7.3e-23 111.3 101 45.5
Zm00001eb424390 Zea mays HOM05D007295 ORTHO05D007705 2.3e-21 106.3 123 40.7
Os04g0463600 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 5.2e-21 105.1 170 34.1
Zm00001eb250130 Zea mays HOM05D007295 ORTHO05D007705 5.2e-21 105.1 65 66.2
Zm00001eb345220 Zea mays HOM05D007295 ORTHO05D007705 8.9e-21 104.4 91 48.4
Zm00001eb024970 Zea mays HOM05D007295 ORTHO05D007705 1.5e-20 103.6 125 39.2
Zm00001eb237400 Zea mays HOM05D007295 ORTHO05D007705 1.5e-20 103.6 125 39.2
Zm00001eb010720 Zea mays HOM05D007295 ORTHO05D007705 3.4e-20 102.4 125 38.4
Zm00001eb063180 Zea mays HOM05D007295 ORTHO05D007705 3.4e-20 102.4 125 38.4
Zm00001eb086670 Zea mays HOM05D007295 ORTHO05D007705 3.4e-20 102.4 125 38.4
Zm00001eb171470 Zea mays HOM05D007295 ORTHO05D007705 3.4e-20 102.4 125 38.4
Zm00001eb273910 Zea mays HOM05D007295 ORTHO05D007705 3.4e-20 102.4 125 38.4
Zm00001eb367280 Zea mays HOM05D007295 ORTHO05D007705 3.4e-20 102.4 125 38.4
Zm00001eb401020 Zea mays HOM05D007295 ORTHO05D007705 3.4e-20 102.4 125 38.4
Zm00001eb270430 Zea mays HOM05D007295 ORTHO05D007705 7.5e-20 101.3 93 46.2
Zm00001eb136070 Zea mays HOM05D007295 ORTHO05D007705 1.7e-19 100.1 92 45.7
Os09g0292300 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D007705 1.9e-18 96.7 92 42.4
Os04g0422950 Oryza sativa ssp. japonica HOM05D007295 ORTHO05D007705 9.2e-18 94.4 93 39.8
Zm00001eb392180 Zea mays HOM05D007295 ORTHO05D007705 4.3e-15 85.5 97 38.1
Zm00001eb048300 Zea mays HOM05D007295 ORTHO05D007705 9.5e-15 84.3 97 38.1
Os03g0643100 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.4e-13 80.5 125 32.0
Os07g0115800 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.4e-13 80.5 125 32.0
Os07g0210800 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.4e-13 80.5 125 32.0
Os09g0122200 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.4e-13 80.5 125 32.0
Os10g0468301 Oryza sativa ssp. japonica HOM05D000665 ORTHO05D007705 1.4e-13 80.5 125 32.0
Zm00001eb412060 Zea mays HOM05D007295 ORTHO05D007705 3.1e-13 79.3 71 45.1
MBI05_g35463_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000140 4.0e-13 79.0 124 30.6
Zm00001eb196690 Zea mays HOM05D007295 ORTHO05D007705 1.5e-12 77.0 126 30.2
Zm00001eb133080 Zea mays HOM05D007295 ORTHO05D007705 2.0e-12 76.6 81 38.3
Zm00001eb001660 Zea mays HOM05D007295 ORTHO05D007705 4.4e-12 75.5 126 31.0
Zm00001eb093810 Zea mays HOM05D007295 ORTHO05D007705 4.4e-12 75.5 126 30.2
ATR0585G101 Amborella trichopoda HOM05D000665 ORTHO05D000140 4.9e-11 72.0 113 31.9
MBI14_g08099_MAGBIO Magnolia biondii HOM05D004103 ORTHO05D005242 8.3e-11 71.2 115 31.3
Zm00001eb390800 Zea mays HOM05D007295 ORTHO05D007705 1.9e-10 70.1 69 42.0
CDE04G3732 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 4.1e-10 68.9 145 30.3
ATR0776G040 Amborella trichopoda HOM05D000665 ORTHO05D000140 7.1e-10 68.2 119 30.3
Zm00001eb391340 Zea mays HOM05D007295 ORTHO05D007705 7.1e-10 68.2 69 40.6
Nn6g33679 Nelumbo nucifera HOM05D000665 ORTHO05D000140 9.2e-10 67.8 123 30.9
QL02p018541 Quercus lobata HOM05D000665 ORTHO05D000140 9.2e-10 67.8 124 29.0
Zm00001eb056170 Zea mays HOM05D007295 ORTHO05D007705 1.2e-09 67.4 69 40.6
Zm00001eb166860 Zea mays HOM05D007295 ORTHO05D007705 2.1e-09 66.6 69 39.1
HanXRQChr10g0285541 Helianthus annuus HOM05D000665 ORTHO05D000140 6.0e-09 65.1 126 27.0
CDE08G0001 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 1.0e-08 64.3 145 28.3
CDE08G0696 Ceratophyllum demersum HOM05D000032 ORTHO05D007907 1.3e-08 63.9 123 26.0
TAR633G2037 Trochodendron aralioides HOM05D000665 ORTHO05D003147 1.3e-08 63.9 124 28.2
Ah.08g221600 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.7e-08 63.5 123 30.1
Migut.D00117 Erythranthe guttata HOM05D000665 ORTHO05D000140 2.3e-08 63.2 166 22.9
Zm00001eb380560 Zea mays HOM05D007295 ORTHO05D007705 5.1e-08 62.0 56 39.3
Aqoxy2G02851 Aquilegia oxysepala HOM05D000665 ORTHO05D000140 8.6e-08 61.2 129 22.5
PGR142G3616 Punica granatum HOM05D003171 ORTHO05D000921 8.6e-08 61.2 129 26.4
PGR102G1972 Punica granatum HOM05D003171 ORTHO05D000921 1.1e-07 60.8 129 25.6
Zm00001eb180320 Zea mays HOM05D007295 ORTHO05D007705 1.1e-07 60.8 56 39.3
Zm00001eb117650 Zea mays HOM05D007295 ORTHO05D007705 1.9e-07 60.1 62 40.3
CDE04G2523 Ceratophyllum demersum HOM05D000665 ORTHO05D000140 2.5e-07 59.7 123 24.4
Eucgr.H01077 Eucalyptus grandis HOM05D000665 ORTHO05D000140 2.5e-07 59.7 108 25.9
ATR0776G057 Amborella trichopoda HOM05D000665 ORTHO05D000140 7.3e-07 58.2 117 27.4
Dinv10284 Davidia involucrata HOM05D000665 ORTHO05D000140 9.5e-07 57.8 121 26.4
Duzib187G0414 Durio zibethinus HOM05D000665 ORTHO05D000140 9.5e-07 57.8 121 25.6
Thecc.09G014200 Theobroma cacao HOM05D000665 ORTHO05D000140 9.5e-07 57.8 146 24.0
TWI12G0661 Tripterygium wilfordii HOM05D000665 ORTHO05D003147 9.5e-07 57.8 121 26.4
Zm00001eb102410 Zea mays HOM05D011105 ORTHO05D007705 9.5e-07 57.8 43 62.8
Hma1.2p1_0494F.1_g165560 Hydrangea macrophylla HOM05D000665 ORTHO05D000140 1.2e-06 57.4 123 24.4
vmacro16933 Vaccinium macrocarpon HOM05D003171 ORTHO05D000037 1.2e-06 57.4 132 27.3
CSS0030989 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 1.6e-06 57.0 122 24.6
Dinv15837 Davidia involucrata HOM05D000665 ORTHO05D000140 1.6e-06 57.0 121 24.0
RcHm_v2.0_Chr6g0302651 Rosa chinensis HOM05D000665 ORTHO05D000140 1.6e-06 57.0 151 25.8
TAR381G0952 Trochodendron aralioides HOM05D000665 ORTHO05D003147 1.6e-06 57.0 121 27.3
ATR0307G075 Amborella trichopoda HOM05D001680 ORTHO05D001596 2.1e-06 56.6 118 29.7
CSS0006190 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 2.1e-06 56.6 117 25.6
CSS0026262 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 2.1e-06 56.6 117 25.6
CiPaw.07G231300 Carya illinoinensis HOM05D000665 ORTHO05D000140 2.1e-06 56.6 121 24.8
HPP92_024684 Vanilla planifolia HOM05D007295 ORTHO05D007705 2.1e-06 56.6 123 28.5
Haze_21389 Corylus avellana HOM05D000665 ORTHO05D000140 2.8e-06 56.2 121 24.0
Prupe.1G367300 Prunus persica HOM05D000665 ORTHO05D003147 2.8e-06 56.2 121 26.4
Thecc.05G108300 Theobroma cacao HOM05D000665 ORTHO05D000140 2.8e-06 56.2 116 28.4
PSO063G0159 Papaver somniferum HOM05D000665 ORTHO05D000140 3.6e-06 55.8 123 26.0
CANSAT25G3151 Cannabis sativa HOM05D000665 ORTHO05D000140 4.7e-06 55.5 122 23.8
CsaV3_7G029640 Cucumis sativus L. HOM05D000665 ORTHO05D000140 4.7e-06 55.5 122 22.1
Dinv33085 Davidia involucrata HOM05D000665 ORTHO05D000140 4.7e-06 55.5 123 24.4
Prupe.7G013000 Prunus persica HOM05D008011 ORTHO05D000277 4.7e-06 55.5 122 23.8
Lj2A1201T49 Lonicera japonica HOM05D000665 ORTHO05D000140 6.2e-06 55.1 123 24.4
Zm00001eb379810 Zea mays HOM05D007295 ORTHO05D007705 6.2e-06 55.1 85 32.9
Actinidia25828 Actinidia chinensis HOM05D000665 ORTHO05D000140 8.1e-06 54.7 122 24.6
CSS0011103 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000140 8.1e-06 54.7 100 27.0
PGR119G2072 Punica granatum HOM05D000665 ORTHO05D000140 8.1e-06 54.7 122 23.8
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 8.1e-06 54.7 124 25.0
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 8.1e-06 54.7 124 25.0
GSVIVG01035986001 Vitis vinifera HOM05D000665 ORTHO05D000140 8.1e-06 54.7 121 26.4


User provided reference genes

Program Settings