Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb118640 Zea mays HOM05D025020 ORTHO05D009167 7.5e-151 538.5 311 100.0
Zm00001eb164150 Zea mays HOM05D025020 ORTHO05D009167 1.1e-136 491.5 335 88.7
Zm00001eb406750 Zea mays HOM05D025020 ORTHO05D009167 1.2e-111 408.3 338 72.8
Zm00001eb197020 Zea mays HOM05D025020 ORTHO05D009167 3.3e-82 310.5 344 56.1
Os12g0152600 Oryza sativa ssp. japonica HOM05D025020 ORTHO05D009167 2.1e-76 291.2 340 61.8
HPP92_023011 Vanilla planifolia HOM05D007426 ORTHO05D009167 3.5e-23 114.4 185 38.9
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 1.8e-19 102.1 188 39.9
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 1.5e-18 99.0 172 40.1
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 2.0e-18 98.6 187 36.9
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 4.4e-18 97.4 187 36.9
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 7.6e-18 96.7 182 40.1
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 4.9e-17 94.0 186 36.0
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 8.3e-17 93.2 97 48.5
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 7.1e-16 90.1 174 36.8
Solyc05g008560.1 Solanum lycopersicum HOM05D007426 ORTHO05D009167 9.2e-16 89.7 196 34.7
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 2.7e-15 88.2 194 38.1
Gohir.D02G172600 Gossypium hirsutum HOM05D007426 ORTHO05D009167 2.7e-15 88.2 184 33.7
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 2.7e-15 88.2 173 37.6
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 2.7e-15 88.2 188 34.6
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 3.5e-15 87.8 184 36.4
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 3.5e-15 87.8 188 34.0
Gorai.005G194300 Gossypium raimondii HOM05D007426 ORTHO05D009167 7.8e-15 86.7 175 33.7
Gohir.A03G149700 Gossypium hirsutum HOM05D007426 ORTHO05D009167 1.3e-14 85.9 175 34.3
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 8.6e-14 83.2 191 36.1
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 1.5e-13 82.4 171 37.4
ECA234G2171 Erigeron canadensis HOM05D007426 ORTHO05D009167 4.3e-13 80.9 191 33.0
CAN.G1489.16 Capsicum annuum HOM05D007426 ORTHO05D009167 5.6e-13 80.5 196 31.6
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 5.6e-13 80.5 187 34.8
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 1.2e-12 79.3 173 34.1
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 2.1e-12 78.6 183 33.3
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 2.8e-12 78.2 180 35.0
Thhalv10006897m.g Eutrema salsugineum HOM05D007426 ORTHO05D009167 2.4e-11 75.1 185 31.9
Lsat_1_v5_gn_4_15701 Lactuca sativa HOM05D007426 ORTHO05D009167 2.4e-11 75.1 198 32.3
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 2.4e-11 75.1 165 32.7
FAN07G1506 Fragaria x ananassa HOM05D007426 ORTHO05D009167 7.6e-10 70.1 79 41.8
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 3.8e-09 67.8 138 39.1
HanXRQChr09g0260571 Helianthus annuus HOM05D007426 ORTHO05D009167 8.4e-09 66.6 73 46.6
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 1.9e-08 65.5 145 37.9
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 3.2e-08 64.7 188 31.9
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 4.2e-08 64.3 185 31.4
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 4.2e-08 64.3 135 38.5
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 4.2e-08 64.3 136 36.0
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 5.4e-08 63.9 185 31.4
ATR1076G001 Amborella trichopoda HOM05D007426 ORTHO05D009167 3.5e-07 61.2 60 45.0
Peaxi162Scf00205g01111 Petunia axillaris HOM05D007426 ORTHO05D009167 3.5e-07 61.2 63 46.0
Oeu048390.1 Olea europaea HOM05D000798 ORTHO05D000659 6.0e-07 60.5 75 46.7
Lalb_Chr10g0096341 Lupinus albus HOM05D007426 ORTHO05D009167 7.8e-07 60.1 136 38.2
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 1.0e-06 59.7 135 35.6
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 1.0e-06 59.7 135 36.3
CANSAT01G1275 Cannabis sativa HOM05D007426 ORTHO05D009167 1.7e-06 58.9 155 33.5
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 3.0e-06 58.2 136 37.5
FAN17G2923 Fragaria x ananassa HOM05D007426 ORTHO05D009167 3.0e-06 58.2 154 33.1
Lj2g0001206 Lotus japonicus HOM05D007426 ORTHO05D009167 3.9e-06 57.8 135 36.3
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 5.1e-06 57.4 135 35.6
Sed0009936 Sechium edule HOM05D003056 ORTHO05D003422 5.1e-06 57.4 85 35.3
Glyma.07G160400 Glycine max HOM05D007409 ORTHO05D009264 6.6e-06 57.0 83 39.8
A06p06540 Brassica napus HOM05D006888 ORTHO05D008371 8.7e-06 56.6 84 28.6
VMungo1215G2624 Vigna mungo HOM05D007409 ORTHO05D009264 8.7e-06 56.6 82 41.5


User provided reference genes

Program Settings