Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb118620 Zea mays HOM05D026141 ORTHO05D003540 1.2e-113 413.3 226 100.0
Zm00001eb164210 Zea mays HOM05D026141 ORTHO05D003540 3.9e-112 408.3 226 98.7
Zm00001eb092640 Zea mays HOM05D026141 ORTHO05D003540 2.1e-65 253.1 247 64.8
Os11g0153300 Oryza sativa ssp. japonica HOM05D003139 ORTHO05D003540 3.5e-65 252.3 244 61.1
Os12g0153900 Oryza sativa ssp. japonica HOM05D026141 ORTHO05D003540 1.9e-50 203.4 257 59.1
HPP92_006349 Vanilla planifolia HOM05D003139 ORTHO05D003540 6.5e-19 98.6 220 35.9
HPP92_011492 Vanilla planifolia HOM05D003139 ORTHO05D003540 5.5e-18 95.5 248 35.5
Rhsim04G0132000 Rhododendron simsii HOM05D003139 ORTHO05D003540 9.1e-13 78.2 237 31.6
Sc20g0006320 Simmondsia chinensis HOM05D003139 ORTHO05D003540 1.6e-12 77.4 236 31.4
Zm00001eb147090 Zea mays HOM05D003139 ORTHO05D003540 2.7e-12 76.6 205 40.0
Zm00001eb366850 Zea mays HOM05D003139 ORTHO05D003540 3.5e-12 76.3 209 33.5
Ca_00900_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 5.9e-12 75.5 164 34.1
CiPaw.10G010300 Carya illinoinensis HOM05D003139 ORTHO05D003540 1.0e-11 74.7 241 35.7
CSS0009772 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 1.7e-11 73.9 221 30.8
MSTRG.10370 Avicennia marina HOM05D003139 ORTHO05D003540 2.2e-11 73.6 246 31.3
TPR.G9897 Trifolium pratense HOM05D003139 ORTHO05D003540 2.9e-11 73.2 219 33.3
Sed0002377 Sechium edule HOM05D003139 ORTHO05D003540 6.5e-11 72.0 214 30.8
Psat6g080520 Pisum sativum HOM05D003139 ORTHO05D003540 8.5e-11 71.6 233 30.0
ClCG10G018920 Citrullus lanatus HOM05D003139 ORTHO05D003540 3.2e-10 69.7 231 30.3
Phvul.001G190700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 3.2e-10 69.7 254 28.0
VMungo0720G0359 Vigna mungo HOM05D003139 ORTHO05D003540 5.5e-10 68.9 127 38.6
SGA_v2.0_scaffold13G06709 Striga asiatica HOM05D003139 ORTHO05D003540 7.2e-10 68.6 240 31.7
Actinidia05423 Actinidia chinensis HOM05D003139 ORTHO05D003540 9.4e-10 68.2 224 33.5
PGR142G1499 Punica granatum HOM05D003139 ORTHO05D003540 9.4e-10 68.2 129 38.0
Hma1.2p1_0820F.1_g223870 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 1.2e-09 67.8 238 32.8
Dinv21200 Davidia involucrata HOM05D003139 ORTHO05D003540 1.6e-09 67.4 222 32.4
Oeu017682.1 Olea europaea HOM05D003139 ORTHO05D003540 2.1e-09 67.0 252 29.4
Aqoxy2G01158 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 2.7e-09 66.6 233 29.2
Migut.L01785 Erythranthe guttata HOM05D003139 ORTHO05D003540 2.7e-09 66.6 242 29.8
FvH4_6g18850 Fragaria vesca HOM05D003139 ORTHO05D003540 2.7e-09 66.6 241 29.5
FAN14G1758 Fragaria x ananassa HOM05D003139 ORTHO05D003540 2.7e-09 66.6 241 29.5
Medtr1g059890 Medicago truncatula HOM05D003139 ORTHO05D003540 2.7e-09 66.6 252 28.6
Nitab4.5_0001933g0030 Nicotiana tabacum HOM05D003139 ORTHO05D003540 2.7e-09 66.6 223 29.1
DCAR_020744 Daucus carota HOM05D003139 ORTHO05D003540 3.6e-09 66.2 231 32.9
Glyma.10G073600 Glycine max HOM05D003139 ORTHO05D003540 3.6e-09 66.2 134 39.6
Gohir.D04G099100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 3.6e-09 66.2 124 36.3
Gorai.009G401500 Gossypium raimondii HOM05D003139 ORTHO05D003540 3.6e-09 66.2 124 36.3
Ah.15g090850 Amaranthus hybridus HOM05D003139 ORTHO05D003540 4.7e-09 65.9 255 31.0
FAN05G0400 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.7e-09 65.9 241 28.6
FAN05G1773 Fragaria x ananassa HOM05D003139 ORTHO05D003540 4.7e-09 65.9 241 28.6
Gohir.A04G062300 Gossypium hirsutum HOM05D003139 ORTHO05D003540 4.7e-09 65.9 124 36.3
Cpa.g.sc5.12 Carica papaya HOM05D003139 ORTHO05D003540 6.1e-09 65.5 127 37.0
ClCG04G010080 Citrullus lanatus HOM05D003139 ORTHO05D003540 6.1e-09 65.5 131 36.6
FAN09G1837 Fragaria x ananassa HOM05D003139 ORTHO05D003540 6.1e-09 65.5 129 37.2
MD14G1023600 Malus domestica HOM05D003139 ORTHO05D003540 8.0e-09 65.1 260 30.4
Cc06_g05890 Coffea canephora HOM05D003139 ORTHO05D003540 1.0e-08 64.7 223 29.1
FAN02G0223 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.4e-08 64.3 241 28.6
Glyma.13G154300 Glycine max HOM05D003139 ORTHO05D003540 1.8e-08 63.9 133 36.1
Lsat_1_v5_gn_5_164981 Lactuca sativa HOM05D003139 ORTHO05D003540 1.8e-08 63.9 232 29.3
Os02g0533700 Oryza sativa ssp. japonica HOM05D035650 ORTHO05D037128 1.8e-08 63.9 127 35.4
Oeu025672.1 Olea europaea HOM05D003139 ORTHO05D003540 2.3e-08 63.5 228 28.9
Phvul.007G152700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 3.0e-08 63.2 136 38.2
Nitab4.5_0014515g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 4.0e-08 62.8 223 29.1
EL10Ac7g16909 Beta vulgaris HOM05D003139 ORTHO05D003540 8.8e-08 61.6 257 29.2
CiPaw.09G014800 Carya illinoinensis HOM05D003139 ORTHO05D003540 1.2e-07 61.2 240 27.1
Nn6g34887 Nelumbo nucifera HOM05D003139 ORTHO05D003540 1.2e-07 61.2 244 29.9
AUR62028515 Chenopodium quinoa HOM05D003139 ORTHO05D003540 2.6e-07 60.1 252 30.2
Haze_19619 Corylus avellana HOM05D003139 ORTHO05D003540 2.6e-07 60.1 240 30.8
Gohir.A01G206000 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.6e-07 60.1 126 33.3
Gohir.D01G195400 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.6e-07 60.1 126 33.3
Gorai.002G239600 Gossypium raimondii HOM05D003139 ORTHO05D003540 2.6e-07 60.1 126 33.3
TWI53G0306 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 2.6e-07 60.1 132 34.1
Cfa016615 Carpinus fangiana HOM05D003139 ORTHO05D003540 3.4e-07 59.7 243 28.4
MELO3C024549.2 Cucumis melo HOM05D003139 ORTHO05D003540 4.4e-07 59.3 131 33.6
CsaV3_6G040710 Cucumis sativus L. HOM05D003139 ORTHO05D003540 4.4e-07 59.3 129 35.7
Glyma.03G196500 Glycine max HOM05D003139 ORTHO05D003540 4.4e-07 59.3 262 27.1
MBI11_g26446_MAGBIO Magnolia biondii HOM05D003139 ORTHO05D003540 4.4e-07 59.3 209 27.8
CSS0031410 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 5.7e-07 58.9 121 37.2
AUR62006190 Chenopodium quinoa HOM05D003139 ORTHO05D003540 7.5e-07 58.5 251 30.3
Eucgr.A02660 Eucalyptus grandis HOM05D003139 ORTHO05D003540 7.5e-07 58.5 130 32.3
CsaV3_3G037330 Cucumis sativus L. HOM05D003139 ORTHO05D003540 9.8e-07 58.2 231 27.7
Sed0022451 Sechium edule HOM05D003139 ORTHO05D003540 9.8e-07 58.2 229 28.4
Lalb_Chr02g0154921 Lupinus albus HOM05D003139 ORTHO05D003540 1.3e-06 57.8 133 36.8
Sed0010191 Sechium edule HOM05D003139 ORTHO05D003540 1.3e-06 57.8 227 26.4
Glyma.19G194957 Glycine max HOM05D003139 ORTHO05D003540 1.7e-06 57.4 141 33.3
Ca_08987_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 2.2e-06 57.0 129 35.7
Lalb_Chr25g0288311 Lupinus albus HOM05D003139 ORTHO05D003540 2.2e-06 57.0 133 33.1
Os04g0412700 Oryza sativa ssp. japonica HOM05D035650 ORTHO05D037128 2.2e-06 57.0 150 34.0
Duzib093G1338 Durio zibethinus HOM05D003139 ORTHO05D003540 2.8e-06 56.6 229 27.5
Actinidia31269 Actinidia chinensis HOM05D003139 ORTHO05D003540 3.7e-06 56.2 226 28.8
Lj5g0002620 Lotus japonicus HOM05D003139 ORTHO05D003540 3.7e-06 56.2 132 37.9
Sabra06G0163800 Salix brachista HOM05D003139 ORTHO05D003540 3.7e-06 56.2 130 35.4
AT2G36220 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 4.9e-06 55.8 217 30.4
Thhalv10017798m.g Eutrema salsugineum HOM05D003139 ORTHO05D003540 4.9e-06 55.8 212 33.0
Gohir.D09G135100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 4.9e-06 55.8 228 26.8
SalBow5G1418 Salvia bowleyana HOM05D003139 ORTHO05D003540 4.9e-06 55.8 240 29.2
Gorai.006G155000 Gossypium raimondii HOM05D003139 ORTHO05D003540 6.3e-06 55.5 227 26.0
Nitab4.5_0000692g0050 Nicotiana tabacum HOM05D003139 ORTHO05D003540 6.3e-06 55.5 235 29.8
SGA_v2.0_scaffold184G39967 Striga asiatica HOM05D003139 ORTHO05D003540 6.3e-06 55.5 225 28.4
SGA_v2.0_scaffold35G14064 Striga asiatica HOM05D003139 ORTHO05D003540 6.3e-06 55.5 223 29.6
Migut.J01028 Erythranthe guttata HOM05D003139 ORTHO05D003540 8.3e-06 55.1 249 28.9
MD12G1024700 Malus domestica HOM05D003139 ORTHO05D003540 8.3e-06 55.1 236 27.5
Zm00001eb083830 Zea mays HOM05D035650 ORTHO05D037128 8.3e-06 55.1 163 33.1


User provided reference genes

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