Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 6.8e-170 600.5 289 100.0
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 5.4e-135 484.6 264 90.5
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 2.4e-66 256.5 172 76.2
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 8.0e-54 214.9 172 65.7
Zm00001eb337360 Zea mays HOM05D000709 ORTHO05D003587 5.2e-45 185.7 104 86.5
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 8.3e-43 178.3 113 83.2
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 1.2e-38 164.5 99 81.8
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 5.2e-37 159.1 99 79.8
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 2.0e-36 157.1 99 77.8
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 2.0e-36 157.1 99 77.8
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 5.8e-36 155.6 100 73.0
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 7.5e-36 155.2 99 79.8
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 7.5e-36 155.2 105 71.4
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 7.5e-36 155.2 100 75.0
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 1.7e-35 154.1 99 78.8
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 2.2e-35 153.7 105 71.4
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 2.2e-35 153.7 105 71.4
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 2.2e-35 153.7 99 75.8
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 2.2e-35 153.7 105 71.4
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 2.2e-35 153.7 105 71.4
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 2.2e-35 153.7 105 71.4
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 2.2e-35 153.7 105 71.4
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 2.9e-35 153.3 99 78.8
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 2.9e-35 153.3 100 73.0
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 2.9e-35 153.3 99 77.8
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 3.7e-35 152.9 100 75.0
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 3.7e-35 152.9 99 76.8
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 3.7e-35 152.9 105 71.4
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 4.9e-35 152.5 99 73.7
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 4.9e-35 152.5 105 70.5
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 4.9e-35 152.5 105 69.5
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 6.4e-35 152.1 107 72.0
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 6.4e-35 152.1 105 71.4
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 8.3e-35 151.8 100 74.0
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 8.3e-35 151.8 96 75.0
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 8.3e-35 151.8 99 74.7
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 1.1e-34 151.4 99 76.8
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 1.1e-34 151.4 105 71.4
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 1.1e-34 151.4 102 72.5
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 1.1e-34 151.4 105 70.5
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 1.4e-34 151.0 99 72.7
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 1.4e-34 151.0 100 75.0
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.9e-34 150.6 105 70.5
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 1.9e-34 150.6 100 72.0
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 1.9e-34 150.6 96 78.1
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 2.4e-34 150.2 99 75.8
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 2.4e-34 150.2 99 74.7
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 3.2e-34 149.8 98 71.4
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 3.2e-34 149.8 98 71.4
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 3.2e-34 149.8 99 75.8
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 4.1e-34 149.4 99 73.7
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 4.1e-34 149.4 96 77.1
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 4.1e-34 149.4 99 74.7
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 4.1e-34 149.4 105 70.5
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 4.1e-34 149.4 99 74.7
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 5.4e-34 149.1 105 70.5
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 5.4e-34 149.1 101 76.2
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 5.4e-34 149.1 101 76.2
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 5.4e-34 149.1 101 76.2
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 7.0e-34 148.7 105 69.5
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 7.0e-34 148.7 99 73.7
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 7.0e-34 148.7 99 74.7
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 9.2e-34 148.3 106 67.9
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 1.2e-33 147.9 99 72.7
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 1.2e-33 147.9 98 78.6
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 1.2e-33 147.9 105 70.5
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 1.2e-33 147.9 106 67.9
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 1.6e-33 147.5 101 76.2
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 1.6e-33 147.5 99 73.7
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 1.6e-33 147.5 99 74.7
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 1.6e-33 147.5 105 69.5
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 1.6e-33 147.5 100 73.0
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 1.6e-33 147.5 99 73.7
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 2.0e-33 147.1 99 73.7
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 2.0e-33 147.1 99 73.7
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 2.0e-33 147.1 99 73.7
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 2.0e-33 147.1 99 72.7
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 2.0e-33 147.1 99 74.7
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 2.7e-33 146.7 105 68.6
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 2.7e-33 146.7 106 67.0
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 2.7e-33 146.7 100 72.0
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 2.7e-33 146.7 105 67.6
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 3.5e-33 146.4 96 75.0
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 4.6e-33 146.0 100 72.0
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 4.6e-33 146.0 105 68.6
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 4.6e-33 146.0 105 69.5
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 4.6e-33 146.0 100 71.0
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 4.6e-33 146.0 99 74.7
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 7.8e-33 145.2 105 67.6
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 7.8e-33 145.2 99 70.7
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 7.8e-33 145.2 105 67.6
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 1.0e-32 144.8 106 66.0
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 1.0e-32 144.8 105 67.6
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.3e-32 144.4 99 70.7
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 1.3e-32 144.4 96 74.0
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 1.3e-32 144.4 96 75.0
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 2.3e-32 143.7 105 68.6
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 3.0e-32 143.3 106 66.0
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 3.9e-32 142.9 105 63.8
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 3.9e-32 142.9 96 72.9
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 5.0e-32 142.5 106 65.1
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 5.0e-32 142.5 106 67.0
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 8.6e-32 141.7 96 74.0
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 1.9e-31 140.6 105 69.5
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 5.6e-31 139.0 102 68.6
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 9.5e-31 138.3 104 70.2
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 9.5e-31 138.3 100 69.0
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.3e-29 133.7 96 70.8
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 3.1e-29 133.3 96 72.9
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 3.1e-29 133.3 100 72.0
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 4.0e-29 132.9 101 69.3
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 6.8e-29 132.1 96 74.0
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 6.8e-29 132.1 106 67.0
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 8.9e-29 131.7 113 62.8
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 1.2e-28 131.3 96 70.8
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 1.5e-28 131.0 99 64.6
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 1.5e-28 131.0 99 64.6
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 3.4e-28 129.8 93 71.0
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 4.4e-28 129.4 99 64.6
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 5.8e-28 129.0 96 70.8
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 7.5e-28 128.6 96 71.9
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 9.8e-28 128.3 92 71.7
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 9.8e-28 128.3 102 60.8
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 9.8e-28 128.3 102 61.8
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-27 127.9 93 71.0
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.9e-27 126.7 94 70.2
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 3.7e-27 126.3 102 60.8
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 4.9e-27 125.9 103 59.2
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 1.1e-26 124.8 80 75.0
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 2.1e-25 120.6 103 57.3
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 1.0e-24 118.2 72 83.3
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 1.7e-24 117.5 80 76.2
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 6.2e-22 109.0 96 62.5
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 1.4e-21 107.8 67 79.1
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 6.8e-21 105.5 67 74.6
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 4.4e-20 102.8 60 83.3
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 3.7e-19 99.8 61 80.3
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 2.4e-18 97.1 178 37.1
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 4.1e-18 96.3 70 70.0
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 5.4e-18 95.9 108 55.6
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 5.4e-18 95.9 108 55.6
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.6e-17 94.4 65 73.8
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 1.5e-15 87.8 100 58.0
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 5.8e-12 75.9 53 71.7
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 9.9e-12 75.1 48 77.1
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 1.3e-08 64.7 49 61.2
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 1.3e-08 64.7 49 61.2
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 2.3e-08 63.9 132 31.1
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 3.0e-08 63.5 154 30.5
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 3.0e-08 63.5 127 30.7
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 1.9e-07 60.8 111 31.5
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 1.9e-07 60.8 111 31.5
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 3.3e-07 60.1 100 40.0
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 4.3e-07 59.7 63 55.6
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.3e-07 58.9 131 29.8
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.3e-07 58.9 131 29.8
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 9.6e-07 58.5 104 30.8
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.3e-06 58.2 144 26.4
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.6e-06 57.8 119 27.7
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 2.8e-06 57.0 144 25.0
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.8e-06 57.0 127 30.7
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 3.6e-06 56.6 121 27.3
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 6.2e-06 55.8 127 31.5
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 8.1e-06 55.5 127 26.0


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