Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.4e-204 716.1 378 100.0
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 3.3e-116 422.5 301 74.8
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 4.5e-81 305.8 281 56.9
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 2.5e-79 300.1 278 56.1
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 3.2e-79 299.7 274 55.5
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 4.2e-79 299.3 270 56.7
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 5.5e-79 298.9 279 55.9
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 9.4e-79 298.1 265 57.0
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 1.6e-78 297.4 284 54.9
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.1e-78 297.0 267 56.9
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 1.0e-77 294.7 266 58.6
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.3e-77 293.5 283 55.5
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 2.3e-77 293.5 277 56.7
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 3.0e-77 293.1 284 54.6
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.2e-77 292.4 278 54.3
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.2e-77 292.4 269 54.6
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 6.7e-77 292.0 283 54.8
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 8.8e-77 291.6 265 56.6
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.1e-76 291.2 295 55.6
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.5e-76 290.8 265 56.2
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 1.5e-76 290.8 285 54.0
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 2.6e-76 290.0 286 55.6
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 4.4e-76 289.3 274 55.5
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 5.7e-76 288.9 272 55.9
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 4.8e-75 285.8 286 54.9
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 8.2e-75 285.0 279 53.8
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 1.1e-74 284.6 272 54.8
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.4e-74 284.3 265 54.7
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 2.4e-74 283.5 282 55.0
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 4.1e-74 282.7 274 56.6
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 4.1e-74 282.7 274 55.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 5.3e-74 282.3 269 55.0
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 7.0e-74 282.0 284 53.2
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 9.1e-74 281.6 293 50.9
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.2e-73 281.2 272 54.4
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 1.2e-73 281.2 269 55.4
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 1.2e-73 281.2 288 53.8
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 1.6e-73 280.8 274 55.1
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 2.6e-73 280.0 294 51.4
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 2.6e-73 280.0 270 54.8
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 3.5e-73 279.6 280 56.8
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 4.5e-73 279.3 281 52.0
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 5.9e-73 278.9 287 52.3
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.0e-72 278.1 285 52.6
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.0e-72 278.1 274 57.3
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.3e-72 277.7 284 53.9
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 1.3e-72 277.7 290 51.0
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 2.2e-72 276.9 271 53.9
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 2.2e-72 276.9 295 52.2
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 2.9e-72 276.6 298 51.3
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 2.9e-72 276.6 305 51.5
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 6.5e-72 275.4 275 54.9
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 8.5e-72 275.0 274 55.8
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 8.5e-72 275.0 283 53.4
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 8.5e-72 275.0 280 52.5
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 8.5e-72 275.0 275 53.8
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 1.1e-71 274.6 280 52.5
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 1.5e-71 274.2 269 54.6
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 5.5e-71 272.3 276 53.3
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 5.5e-71 272.3 286 52.4
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 2.1e-70 270.4 286 52.4
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.1e-70 270.4 274 55.1
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.1e-70 270.4 310 48.4
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 3.6e-70 269.6 285 50.9
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 6.1e-70 268.9 312 48.4
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.1e-70 268.9 271 52.4
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 6.1e-70 268.9 271 52.4
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 1.8e-69 267.3 276 53.3
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 1.8e-69 267.3 270 55.2
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.0e-69 266.5 284 51.1
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 3.0e-69 266.5 272 54.8
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 3.0e-69 266.5 276 52.2
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 4.0e-69 266.2 270 54.8
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 4.0e-69 266.2 275 52.7
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 4.0e-69 266.2 276 53.3
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 4.0e-69 266.2 276 53.3
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 6.7e-69 265.4 281 52.3
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 1.2e-68 264.6 268 55.6
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 1.5e-68 264.2 276 52.5
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 2.0e-68 263.8 278 51.1
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 2.6e-68 263.5 279 52.3
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 3.3e-68 263.1 275 51.6
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 4.4e-68 262.7 270 51.9
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 5.7e-68 262.3 267 53.2
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 7.5e-68 261.9 294 49.7
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 7.5e-68 261.9 284 50.0
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 3.7e-67 259.6 270 50.4
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.1e-66 258.1 273 49.8
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 7.7e-65 251.9 204 62.3
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 3.8e-64 249.6 279 49.8
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 6.5e-64 248.8 281 50.9
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 2.5e-63 246.9 271 51.7
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 5.2e-61 239.2 267 48.3
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 2.6e-60 236.9 285 45.3
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 6.5e-56 222.2 217 54.8
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 8.6e-56 221.9 214 56.5
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.1e-54 217.2 277 41.5
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 6.1e-54 215.7 286 45.8
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 1.2e-52 211.5 284 43.7
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 1.1e-50 204.9 271 43.5
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 2.7e-49 200.3 255 43.9
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.7e-40 171.0 122 65.6
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 1.6e-38 164.5 117 63.2
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 6.2e-38 162.5 187 43.9
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 2.8e-30 137.1 117 56.4
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 6.2e-30 136.0 285 35.4
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 4.0e-29 133.3 274 37.6
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 3.5e-25 120.2 270 33.0
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 2.1e-22 110.9 154 44.2
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.2e-21 106.3 158 46.8
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 1.9e-18 97.8 147 36.1
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 1.9e-15 87.8 159 36.5
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.5e-12 78.2 149 38.9
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 2.4e-10 70.9 144 34.7
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 6.6e-08 62.8 38 76.3


User provided reference genes

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