Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 4.6e-92 341.3 178 100.0
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.3e-86 323.2 178 93.8
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 2.3e-67 259.2 167 77.8
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 4.4e-63 245.0 176 69.3
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 9.9e-63 243.8 176 68.2
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 2.9e-62 242.3 176 67.6
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.9e-62 242.3 177 68.9
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 1.9e-61 239.6 179 70.9
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.2e-61 238.8 176 70.5
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.1e-61 237.7 176 70.5
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 7.1e-61 237.7 176 70.5
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 7.1e-61 237.7 178 71.3
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 9.3e-61 237.3 176 70.5
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 9.3e-61 237.3 178 70.2
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 9.3e-61 237.3 176 68.2
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.2e-60 236.9 159 74.8
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.2e-60 236.9 177 68.9
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.2e-60 236.9 176 70.5
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.2e-60 236.9 176 70.5
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 1.2e-60 236.9 176 70.5
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.6e-60 236.5 179 68.7
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.6e-60 236.5 176 69.9
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 2.1e-60 236.1 176 68.2
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 2.1e-60 236.1 178 70.8
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 2.1e-60 236.1 178 70.8
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 2.1e-60 236.1 176 68.2
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.5e-60 235.3 176 69.9
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 3.5e-60 235.3 176 69.3
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 4.6e-60 235.0 176 69.3
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 4.6e-60 235.0 176 68.2
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.8e-60 234.2 176 68.2
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 7.8e-60 234.2 180 69.4
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 7.8e-60 234.2 176 70.5
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 7.8e-60 234.2 176 70.5
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 1.0e-59 233.8 176 69.3
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.7e-59 233.0 174 69.0
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.7e-59 233.0 154 77.3
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.3e-59 232.6 154 75.3
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 2.3e-59 232.6 164 72.6
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 3.0e-59 232.3 174 69.0
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 3.9e-59 231.9 169 71.0
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 3.9e-59 231.9 176 66.5
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 3.9e-59 231.9 176 66.5
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 3.9e-59 231.9 179 67.6
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.9e-59 231.9 176 67.0
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 3.9e-59 231.9 178 66.3
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.1e-59 231.5 174 68.4
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 6.6e-59 231.1 167 72.5
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 6.6e-59 231.1 153 72.5
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-58 230.3 176 66.5
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.1e-58 230.3 176 68.2
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.1e-58 230.3 172 70.9
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.5e-58 229.9 176 66.5
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.5e-58 229.9 153 76.5
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 1.9e-58 229.6 176 66.5
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 1.9e-58 229.6 176 67.0
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.9e-58 229.6 164 72.0
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 2.5e-58 229.2 176 67.6
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 2.5e-58 229.2 177 66.7
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 4.3e-58 228.4 176 65.3
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 4.3e-58 228.4 176 66.5
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 4.3e-58 228.4 176 66.5
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 4.3e-58 228.4 176 65.3
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 4.3e-58 228.4 177 66.7
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.3e-58 228.4 152 77.0
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 4.3e-58 228.4 176 64.8
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 4.3e-58 228.4 176 67.0
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 4.3e-58 228.4 178 67.4
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 5.6e-58 228.0 176 67.0
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.6e-58 228.0 162 69.1
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 5.6e-58 228.0 179 66.5
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 7.3e-58 227.6 178 67.4
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 7.3e-58 227.6 153 74.5
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.3e-57 226.9 154 76.0
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.3e-57 226.9 154 71.4
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 1.3e-57 226.9 176 67.0
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 2.1e-57 226.1 176 68.2
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.1e-57 226.1 176 65.3
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 2.1e-57 226.1 168 70.2
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 2.8e-57 225.7 164 71.3
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 4.8e-57 224.9 153 72.5
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 6.2e-57 224.6 176 66.5
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 6.2e-57 224.6 166 69.3
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 6.2e-57 224.6 166 69.3
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 6.2e-57 224.6 166 69.3
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 1.1e-56 223.8 153 73.9
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.4e-56 223.4 163 68.7
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.4e-56 223.4 180 66.1
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.8e-56 223.0 172 70.3
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.1e-56 222.2 154 72.7
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 3.1e-56 222.2 177 66.1
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 4.0e-56 221.9 152 75.0
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 5.3e-56 221.5 154 70.8
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.2e-55 220.3 147 78.2
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 2.6e-55 219.2 152 70.4
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 3.4e-55 218.8 153 71.2
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 5.8e-55 218.0 166 65.7
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 5.8e-55 218.0 150 74.0
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 4.9e-54 214.9 152 72.4
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 1.2e-52 210.3 142 74.6
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.6e-52 209.9 175 64.0
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.1e-52 209.5 164 64.6
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 4.6e-52 208.4 143 69.9
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 5.1e-51 204.9 154 68.8
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.9e-50 203.0 139 71.9
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 4.3e-50 201.8 130 74.6
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.1e-48 197.2 152 69.1
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.1e-48 197.2 146 67.8
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 6.9e-48 194.5 151 68.2
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 7.6e-47 191.0 155 65.2
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 1.3e-46 190.3 130 75.4
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 8.4e-46 187.6 152 61.8
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.0e-43 180.6 118 75.4
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.0e-43 180.6 119 78.2
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.3e-43 180.3 161 60.9
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 8.7e-43 177.6 151 61.6
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.5e-42 176.8 118 72.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 2.5e-42 176.0 126 68.3
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 9.6e-42 174.1 129 72.1
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 3.1e-40 169.1 105 81.0
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 3.4e-39 165.6 108 75.9
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 3.8e-38 162.2 105 77.1
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 4.3e-34 148.7 128 61.7
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.5e-29 132.9 89 73.0
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.2e-28 130.6 121 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.9e-11 72.4 107 45.8
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 3.8e-06 55.8 120 36.7


User provided reference genes

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