Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb036820 Zea mays HOM05D008064 ORTHO05D000045 2.6e-38 161.4 71 100.0
Zm00001eb109080 Zea mays HOM05D008064 ORTHO05D000045 2.6e-38 161.4 71 100.0
Zm00001eb238490 Zea mays HOM05D008064 ORTHO05D000045 2.6e-38 161.4 71 100.0
Zm00001eb324940 Zea mays HOM05D008064 ORTHO05D000045 2.6e-38 161.4 71 100.0
Zm00001eb372170 Zea mays HOM05D008064 ORTHO05D000045 2.6e-38 161.4 71 100.0
Zm00001eb381320 Zea mays HOM05D008064 ORTHO05D000045 2.6e-38 161.4 71 100.0
Zm00001eb265920 Zea mays HOM05D000096 ORTHO05D000045 3.1e-36 154.5 71 94.4
Zm00001eb340930 Zea mays HOM05D008064 ORTHO05D000045 9.2e-36 152.9 71 93.0
Zm00001eb103780 Zea mays HOM05D008064 ORTHO05D000045 4.5e-35 150.6 71 91.5
Zm00001eb282170 Zea mays HOM05D008064 ORTHO05D000045 4.5e-35 150.6 71 91.5
Zm00001eb286510 Zea mays HOM05D008064 ORTHO05D000045 4.5e-35 150.6 71 91.5
Zm00001eb137660 Zea mays HOM05D008064 ORTHO05D000045 1.0e-34 149.4 71 91.5
Zm00001eb245660 Zea mays HOM05D002425 ORTHO05D002709 1.0e-34 149.4 71 91.5
Zm00001eb337580 Zea mays HOM05D008064 ORTHO05D000045 1.0e-34 149.4 71 91.5
Zm00001eb399410 Zea mays HOM05D008064 ORTHO05D000045 1.0e-34 149.4 71 91.5
Zm00001eb138170 Zea mays HOM05D008064 ORTHO05D000045 1.7e-34 148.7 71 91.5
Zm00001eb175090 Zea mays HOM05D008064 ORTHO05D000045 2.9e-34 147.9 71 90.1
Zm00001eb101600 Zea mays HOM05D008064 ORTHO05D000045 3.8e-34 147.5 71 90.1
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 3.8e-34 147.5 71 90.1
Zm00001eb241460 Zea mays HOM05D008064 ORTHO05D000045 3.8e-34 147.5 71 90.1
Zm00001eb385560 Zea mays HOM05D008064 ORTHO05D000045 2.6e-30 134.8 71 84.5
Zm00001eb129720 Zea mays HOM05D008064 ORTHO05D000045 2.2e-29 131.7 67 86.6
Zm00001eb373410 Zea mays HOM05D008064 ORTHO05D000045 4.4e-22 107.5 71 67.6
Zm00001eb340200 Zea mays HOM05D008270 ORTHO05D000045 7.5e-14 80.1 42 81.0
CAN.G205.1 Capsicum annuum HOM05D000096 ORTHO05D000045 1.7e-13 79.0 70 48.6
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 8.3e-13 76.6 69 50.7
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 1.4e-12 75.9 70 45.7
PGSC0003DMG400016517 Solanum tuberosum HOM05D018632 ORTHO05D018880 1.4e-12 75.9 71 47.9
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.9e-12 75.5 64 53.1
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 3.2e-12 74.7 71 49.3
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 3.2e-12 74.7 71 49.3
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 7.1e-12 73.6 70 48.6
SGA_v2.0_scaffold183G39859 Striga asiatica HOM05D000096 ORTHO05D000045 1.6e-11 72.4 62 51.6
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-11 72.0 70 48.6
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 2.7e-11 71.6 70 48.6
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-11 71.6 71 46.5
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 6.0e-11 70.5 70 47.1
Peaxi162Scf00371g00316 Petunia axillaris HOM05D002261 ORTHO05D000045 6.0e-11 70.5 62 48.4
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 1.0e-10 69.7 64 50.0
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 1.0e-10 69.7 64 50.0
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 1.3e-10 69.3 64 50.0
ECA246G4273 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-10 69.3 71 43.7
SGA_v2.0_scaffold73G24447 Striga asiatica HOM05D001218 ORTHO05D004088 1.3e-10 69.3 57 54.4
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 1.7e-10 68.9 70 45.7
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 1.7e-10 68.9 69 47.8
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 1.7e-10 68.9 71 46.5
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 2.3e-10 68.6 70 44.3
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 2.3e-10 68.6 70 41.4
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 3.0e-10 68.2 70 45.7
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 3.9e-10 67.8 71 46.5
Hma1.2p1_0115F.1_g055970 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 6.6e-10 67.0 63 49.2
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.6e-10 66.6 70 44.3
Rhsim02G0156100 Rhododendron simsii HOM05D000096 ORTHO05D000045 1.5e-09 65.9 69 43.5
SGA_v2.0_scaffold511G52630 Striga asiatica HOM05D000096 ORTHO05D000045 1.5e-09 65.9 64 50.0
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 2.5e-09 65.1 64 45.3
EL10As14g24092 Beta vulgaris HOM05D007854 ORTHO05D010168 2.5e-09 65.1 57 52.6
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.3e-09 64.7 64 45.3
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 4.3e-09 64.3 70 44.3
CAN.G265.7 Capsicum annuum HOM05D000096 ORTHO05D000045 7.3e-09 63.5 69 44.9
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 9.5e-09 63.2 64 42.2
PSO063G0288 Papaver somniferum HOM05D000096 ORTHO05D000045 9.5e-09 63.2 71 42.3
PSO063G4809 Papaver somniferum HOM05D000096 ORTHO05D000045 9.5e-09 63.2 71 42.3
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 9.5e-09 63.2 70 41.4
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.2e-08 62.8 71 43.7
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 1.2e-08 62.8 71 43.7
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 1.6e-08 62.4 70 42.9
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 3.6e-08 61.2 62 48.4
EL10Ac1g02149 Beta vulgaris HOM05D000096 ORTHO05D000045 6.2e-08 60.5 64 43.8
EL10Ac2g03227 Beta vulgaris HOM05D000096 ORTHO05D000045 8.1e-08 60.1 70 40.0
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 1.4e-07 59.3 64 45.3
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-07 59.3 71 38.0
PSO210G0169 Papaver somniferum HOM05D000096 ORTHO05D000045 1.8e-07 58.9 70 41.4
FvH4_5g25551 Fragaria vesca HOM05D000096 ORTHO05D000045 3.1e-07 58.2 69 36.2
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 6.8e-07 57.0 68 44.1
BolC7t45259H Brassica oleracea HOM05D000096 ORTHO05D009779 1.2e-06 56.2 49 61.2
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 1.2e-06 56.2 64 37.5
Oeu057913.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-06 55.8 70 40.0
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 2.0e-06 55.5 70 37.1
Phvul.008G074400 Phaseolus vulgaris HOM05D000096 ORTHO05D000045 2.6e-06 55.1 64 39.1
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-06 55.1 65 44.6
RcHm_v2.0_Chr5g0013161 Rosa chinensis HOM05D000096 ORTHO05D000045 5.8e-06 53.9 64 35.9
TPR.G18330 Trifolium pratense HOM05D000096 ORTHO05D000045 5.8e-06 53.9 71 40.8
Oeu007626.1 Olea europaea HOM05D000096 ORTHO05D000045 7.6e-06 53.5 63 42.9


User provided reference genes

Program Settings