Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 5.8e-248 860.5 462 100.0
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 1.3e-125 454.1 293 78.8
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 5.3e-124 448.7 357 62.2
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 1.2e-123 447.6 302 81.8
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.5e-123 447.2 362 62.2
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.6e-123 446.4 362 62.4
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 9.9e-123 444.5 360 60.0
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 2.9e-122 443.0 362 62.2
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 6.4e-122 441.8 387 57.9
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 1.1e-121 441.0 362 61.3
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.4e-121 440.7 363 61.7
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 5.4e-121 438.7 362 61.3
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 1.6e-120 437.2 362 59.9
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 7.9e-120 434.9 362 60.8
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 2.3e-119 433.3 361 59.8
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 2.3e-119 433.3 362 60.8
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 3.9e-119 432.6 388 57.5
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 8.7e-119 431.4 359 60.7
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 1.5e-118 430.6 362 59.1
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 1.9e-118 430.3 358 60.1
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 3.3e-118 429.5 363 60.1
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 5.6e-118 428.7 363 60.6
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 5.6e-118 428.7 362 58.8
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 1.6e-117 427.2 358 60.1
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 2.8e-117 426.4 365 59.2
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 3.6e-117 426.0 365 58.9
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 6.2e-117 425.2 362 58.6
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 6.2e-117 425.2 365 58.9
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 1.1e-116 424.5 356 58.4
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 2.4e-116 423.3 362 59.4
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 5.3e-116 422.2 361 57.9
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 5.3e-116 422.2 365 58.9
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 9.0e-116 421.4 385 55.6
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 2.6e-115 419.9 362 58.0
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 2.6e-115 419.9 358 58.9
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 3.4e-115 419.5 367 57.5
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 4.5e-115 419.1 362 59.1
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 5.8e-115 418.7 364 59.3
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 7.6e-115 418.3 365 59.5
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.3e-114 417.5 363 59.0
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.3e-114 417.5 363 58.7
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 1.7e-114 417.2 358 58.4
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 1.7e-114 417.2 384 55.7
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 2.2e-114 416.8 361 57.6
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 2.2e-114 416.8 387 55.8
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 2.2e-114 416.8 363 60.1
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 2.2e-114 416.8 378 57.7
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 2.9e-114 416.4 366 59.3
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 2.9e-114 416.4 381 56.2
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 2.9e-114 416.4 363 60.3
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 2.9e-114 416.4 361 57.1
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 4.9e-114 415.6 363 58.4
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 6.4e-114 415.2 360 60.0
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 8.4e-114 414.8 358 57.3
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 8.4e-114 414.8 387 55.6
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 8.4e-114 414.8 363 58.7
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 1.1e-113 414.5 379 54.1
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 1.9e-113 413.7 359 58.2
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 7.1e-113 411.8 364 56.9
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 9.3e-113 411.4 359 56.8
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 9.3e-113 411.4 363 57.9
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.2e-112 411.0 364 56.9
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 1.6e-112 410.6 385 53.0
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 1.6e-112 410.6 382 54.5
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 2.1e-112 410.2 362 58.0
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 2.1e-112 410.2 361 58.7
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 4.6e-112 409.1 365 58.1
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 7.9e-112 408.3 367 55.9
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 7.9e-112 408.3 381 53.8
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 7.9e-112 408.3 365 58.1
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 1.0e-111 407.9 359 57.1
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 1.0e-111 407.9 362 55.5
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 1.3e-111 407.5 361 55.7
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 1.8e-111 407.1 361 56.8
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 2.3e-111 406.8 361 56.8
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 6.7e-111 405.2 369 55.8
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.1e-110 404.4 372 57.5
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 1.9e-110 403.7 379 56.2
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.5e-110 403.3 378 55.8
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 1.3e-109 401.0 358 57.5
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 4.8e-109 399.1 363 57.3
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 1.1e-108 397.9 364 53.8
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 1.8e-108 397.1 341 58.4
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 3.1e-108 396.4 402 52.7
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.0e-108 394.8 411 51.6
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.0e-108 394.8 411 51.6
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 5.8e-107 392.1 359 54.3
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 1.0e-106 391.3 346 57.8
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 1.3e-106 391.0 348 58.0
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.7e-106 390.6 372 54.8
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 2.5e-105 386.7 360 55.0
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 9.3e-105 384.8 342 54.7
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 1.9e-102 377.1 380 52.1
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 7.4e-102 375.2 362 53.0
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 1.3e-101 374.4 379 51.5
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 1.3e-101 374.4 380 51.3
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 1.3e-101 374.4 364 51.6
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 1.6e-101 374.0 440 46.8
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 2.1e-101 373.6 380 51.8
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 2.8e-101 373.2 380 51.1
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 8.2e-101 371.7 379 50.7
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 8.2e-101 371.7 337 56.1
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 1.1e-100 371.3 382 51.3
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 1.8e-100 370.5 361 52.1
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 5.3e-100 369.0 463 46.9
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 3.4e-99 366.3 324 55.9
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 4.5e-99 365.9 359 51.8
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 1.3e-98 364.4 365 51.5
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 2.9e-98 363.2 384 50.3
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 3.8e-98 362.8 384 50.0
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 5.0e-98 362.5 384 50.0
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 1.4e-97 360.9 384 49.7
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.6e-96 356.3 363 52.9
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 3.6e-96 356.3 333 55.0
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 5.1e-95 352.4 387 48.8
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 1.1e-94 351.3 490 43.3
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 1.4e-92 344.4 363 52.3
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 4.5e-91 339.3 371 49.3
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.3e-90 337.8 288 59.0
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 3.8e-90 336.3 398 49.5
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.2e-89 333.2 346 51.2
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 4.2e-89 332.8 362 50.3
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.4e-84 317.8 361 48.8
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 4.5e-83 312.8 298 54.4
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 7.2e-81 305.4 273 54.6
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 7.9e-80 302.0 321 48.9
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 2.6e-78 297.0 356 45.5
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 3.7e-77 293.1 293 51.5
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 6.3e-77 292.4 389 44.2
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 1.0e-74 285.0 398 45.0
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 5.5e-73 279.3 302 48.7
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 2.3e-71 273.9 293 50.9
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.2e-71 272.7 299 48.2
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 6.8e-63 245.7 235 52.3
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.4e-62 243.4 380 40.3
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 6.3e-53 212.6 299 42.1
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 9.5e-49 198.7 141 67.4
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 1.2e-46 191.8 353 34.3
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 3.7e-45 186.8 365 35.6
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 3.7e-45 186.8 365 35.6
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 1.7e-42 177.9 338 36.7
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 5.0e-42 176.4 139 57.6
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.6e-41 172.9 217 45.6
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.0e-34 152.1 231 38.5
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 7.3e-33 146.0 366 31.4
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.0e-26 125.6 153 44.4
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 8.9e-23 112.5 385 27.5
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 1.2e-22 112.1 310 28.1
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 3.2e-20 104.0 397 27.2
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.3e-17 94.0 106 50.0
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 5.2e-15 86.7 84 53.6
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 5.2e-15 86.7 84 53.6
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 9.0e-15 85.9 71 60.6
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.7e-13 81.6 53 66.0


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