Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 0.0e+00 1241.9 629 100.0
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 1.5e-275 952.6 636 78.6
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 1.4e-199 700.3 638 59.9
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.0e-194 684.1 632 57.1
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 6.4e-189 664.8 637 55.9
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 5.9e-187 658.3 632 58.4
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 3.7e-181 639.0 652 53.4
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 4.3e-177 625.5 656 54.6
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 1.2e-176 624.0 632 52.8
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 5.2e-175 618.6 655 51.9
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 5.8e-174 615.1 643 53.7
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 4.9e-173 612.1 629 52.5
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 6.4e-173 611.7 632 53.0
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 8.3e-173 611.3 635 52.4
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 1.4e-172 610.5 635 52.6
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.4e-172 610.5 641 53.0
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.9e-172 610.1 650 52.0
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 5.4e-172 608.6 641 52.9
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.6e-171 607.1 635 52.4
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 7.8e-171 604.7 636 53.1
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.0e-170 604.4 645 52.4
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 1.7e-170 603.6 645 51.5
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.7e-170 603.6 632 53.2
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 3.0e-170 602.8 632 52.8
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 3.0e-170 602.8 631 52.1
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 5.1e-170 602.1 628 52.4
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 5.1e-170 602.1 641 52.1
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 4.3e-169 599.0 663 51.1
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 4.3e-169 599.0 642 52.0
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 1.2e-168 597.4 635 52.8
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.1e-168 596.7 639 52.3
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 2.1e-168 596.7 639 52.3
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 2.8e-168 596.3 634 52.7
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 3.6e-168 595.9 663 50.8
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 6.2e-168 595.1 643 52.1
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 1.8e-167 593.6 648 51.7
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 4.0e-167 592.4 625 53.0
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 5.2e-167 592.0 632 52.2
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 1.2e-166 590.9 636 50.5
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 2.6e-166 589.7 588 54.4
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 3.4e-166 589.3 635 50.2
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 3.4e-166 589.3 652 50.6
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 4.4e-166 589.0 647 50.9
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.8e-166 588.6 640 50.5
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 7.6e-166 588.2 647 50.5
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 7.6e-166 588.2 642 49.8
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 9.9e-166 587.8 621 53.1
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 2.2e-165 586.6 631 51.2
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 6.4e-165 585.1 636 50.3
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 6.4e-165 585.1 634 51.3
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.4e-164 583.2 632 51.1
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 4.1e-164 582.4 633 50.4
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 4.1e-164 582.4 636 50.5
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 4.1e-164 582.4 644 50.0
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 2.7e-163 579.7 632 51.1
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.0e-162 577.8 661 49.0
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 1.7e-162 577.0 561 53.5
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 6.6e-162 575.1 630 50.3
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.5e-161 573.9 647 49.9
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 7.3e-161 571.6 646 49.2
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 9.6e-161 571.2 635 50.7
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 9.6e-161 571.2 628 51.6
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.8e-159 567.0 641 51.2
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.0e-159 565.8 514 57.0
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.0e-159 565.8 514 57.0
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 1.2e-158 564.3 640 50.8
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 1.2e-158 564.3 629 49.4
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.4e-158 562.8 642 50.6
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 4.4e-158 562.4 531 53.7
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 1.3e-157 560.8 644 49.4
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.3e-157 560.8 522 55.2
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 1.7e-157 560.5 636 49.1
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 3.8e-157 559.3 647 49.0
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 6.4e-157 558.5 652 47.9
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.1e-156 557.8 636 48.7
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 1.1e-156 557.8 636 49.2
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 1.4e-156 557.4 641 49.1
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 3.2e-156 556.2 636 48.9
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 4.2e-156 555.8 580 51.0
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 1.6e-155 553.9 636 50.6
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 2.7e-155 553.1 635 49.1
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 1.7e-154 550.4 654 48.6
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 3.9e-154 549.3 625 49.3
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 1.1e-153 547.7 646 48.9
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 1.9e-153 547.0 644 48.3
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 8.1e-152 541.6 640 48.4
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 1.2e-150 537.7 643 47.7
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 1.3e-149 534.3 616 47.9
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 2.9e-149 533.1 415 60.0
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 1.1e-148 531.2 633 48.5
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 5.4e-148 528.9 645 47.1
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 9.3e-148 528.1 472 57.2
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 3.3e-145 519.6 533 49.7
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 2.0e-142 510.4 643 46.0
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 3.4e-142 509.6 642 45.3
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 2.4e-135 486.9 546 49.3
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 1.7e-133 480.7 630 44.6
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 6.0e-131 472.2 391 58.3
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.9e-122 443.0 658 40.9
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 1.1e-121 441.4 348 60.6
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 4.8e-120 436.0 527 45.5
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 9.1e-119 431.8 462 47.8
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 6.5e-117 425.6 637 42.1
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 6.5e-117 425.6 594 41.9
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 5.5e-116 422.5 580 41.9
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 1.4e-114 417.9 352 57.7
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 3.7e-112 409.8 530 41.9
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 3.6e-83 313.5 519 34.7
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 8.6e-77 292.4 692 28.9
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 9.9e-57 225.7 618 30.7
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 6.6e-53 213.0 521 28.4
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 2.9e-32 144.4 413 26.4
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 3.0e-21 107.8 97 51.5
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 3.0e-21 107.8 97 51.5
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 1.6e-19 102.1 97 49.5
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 1.2e-17 95.9 431 23.2


User provided reference genes

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