Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 4.5e-162 574.7 327 100.0
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 7.5e-117 424.5 319 79.3
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 4.2e-91 339.0 323 59.1
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 9.3e-91 337.8 315 62.2
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 4.6e-90 335.5 320 66.2
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 7.8e-90 334.7 316 64.9
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 1.0e-89 334.3 314 64.0
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 2.3e-89 333.2 315 65.7
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 6.6e-89 331.6 314 63.7
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.1e-88 330.9 316 63.3
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.5e-88 330.5 315 65.4
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.5e-88 330.5 310 65.5
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 2.5e-88 329.7 321 63.6
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.3e-88 329.3 316 59.5
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 3.3e-88 329.3 316 63.6
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 3.3e-88 329.3 310 64.8
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 4.3e-88 328.9 310 66.1
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 7.3e-88 328.2 315 64.4
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 9.6e-88 327.8 311 64.6
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 1.6e-87 327.0 316 63.6
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 1.6e-87 327.0 316 63.9
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 2.1e-87 326.6 314 64.0
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 2.1e-87 326.6 311 64.0
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 3.6e-87 325.9 312 64.7
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 3.6e-87 325.9 314 63.1
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.6e-87 325.9 315 64.8
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 3.6e-87 325.9 315 57.5
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 8.1e-87 324.7 310 63.9
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.4e-86 323.9 316 64.9
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 2.4e-86 323.2 310 65.5
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 6.9e-86 321.6 313 62.9
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 6.9e-86 321.6 310 62.6
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 9.0e-86 321.2 316 60.1
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.2e-85 320.9 313 63.3
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.5e-85 320.5 313 62.6
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 3.4e-85 319.3 312 62.8
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 3.4e-85 319.3 312 63.5
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 3.4e-85 319.3 315 63.8
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 5.8e-85 318.5 311 61.7
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 5.8e-85 318.5 318 63.5
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 9.9e-85 317.8 312 62.8
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.3e-84 317.4 314 62.4
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 1.3e-84 317.4 321 59.8
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 3.8e-84 315.8 312 62.5
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 3.8e-84 315.8 316 62.0
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 4.9e-84 315.5 311 64.6
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 8.4e-84 314.7 332 60.2
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.9e-83 313.5 321 62.3
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 1.9e-83 313.5 306 64.1
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 1.9e-83 313.5 311 63.3
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 5.4e-83 312.0 340 55.3
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 1.2e-82 310.8 318 61.0
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 3.5e-82 309.3 312 62.2
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 4.6e-82 308.9 315 63.5
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.0e-82 308.5 306 63.1
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 7.8e-82 308.1 343 54.2
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 3.0e-81 306.2 337 54.3
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 5.1e-81 305.4 325 57.2
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 6.6e-81 305.1 315 63.2
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 5.6e-80 302.0 309 60.2
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 5.6e-80 302.0 313 61.7
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 6.2e-79 298.5 318 60.1
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 6.2e-79 298.5 318 59.1
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.4e-78 297.4 309 61.2
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 4.0e-78 295.8 293 65.9
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 4.0e-78 295.8 316 60.1
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 4.5e-77 292.4 312 60.9
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 1.3e-76 290.8 321 56.1
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 1.7e-76 290.4 314 58.9
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 4.2e-75 285.8 313 59.4
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 4.2e-75 285.8 313 59.4
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 4.6e-74 282.3 314 54.5
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 6.0e-74 282.0 316 59.8
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 6.0e-74 282.0 316 59.8
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 6.0e-74 282.0 313 58.8
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 6.0e-74 282.0 315 56.2
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 7.9e-74 281.6 316 57.9
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 1.3e-73 280.8 316 59.5
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 1.8e-73 280.4 311 56.9
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 6.7e-73 278.5 321 57.6
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 6.7e-73 278.5 310 58.7
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 1.1e-72 277.7 314 57.6
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 1.5e-72 277.3 310 58.4
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 1.5e-72 277.3 313 58.1
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 1.9e-72 276.9 310 59.0
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 2.5e-72 276.6 323 57.0
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 7.4e-72 275.0 321 56.1
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 1.6e-71 273.9 315 57.1
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 4.8e-71 272.3 322 55.6
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.1e-70 271.2 318 49.7
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 1.4e-67 260.8 323 41.8
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 1.2e-66 257.7 282 60.6
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 5.1e-65 252.3 308 55.8
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 3.7e-63 246.1 316 55.4
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.3e-60 237.7 320 41.9
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.0e-57 228.0 204 52.9
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 9.7e-56 221.5 313 51.1
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.1e-54 218.0 209 49.8
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 2.6e-53 213.4 316 44.6
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.2e-52 210.3 207 51.7
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.1e-51 208.0 208 50.5
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 2.5e-51 206.8 165 55.8
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 2.5e-51 206.8 253 43.9
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 1.2e-50 204.5 315 49.2
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.7e-50 203.4 161 56.5
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.5e-48 197.6 158 57.0
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 5.7e-48 195.7 167 53.3
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 1.4e-46 191.0 160 54.4
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 2.2e-44 183.7 225 43.6
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 4.8e-39 166.0 208 39.4
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 6.3e-39 165.6 167 50.3
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 4.5e-37 159.5 174 47.1
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 6.5e-36 155.6 206 41.7
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 2.5e-35 153.7 210 58.1
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 1.7e-31 141.0 336 40.5
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.5e-29 133.3 93 67.7
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 8.3e-23 112.1 89 60.7
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.1e-22 111.7 164 36.0
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 1.8e-22 110.9 240 28.8
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 1.6e-18 97.8 69 66.7
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 2.1e-18 97.4 60 73.3
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 2.1e-18 97.4 227 46.7
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 3.6e-18 96.7 62 69.4
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 8.0e-18 95.5 312 28.8
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 6.8e-17 92.4 66 68.2
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 5.7e-16 89.4 90 51.1
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 1.1e-11 75.1 163 33.7
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 6.1e-10 69.3 47 63.8
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.5e-08 64.7 54 55.6
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 2.0e-08 64.3 125 36.8
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 1.4e-06 58.2 110 35.5


User provided reference genes

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