Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 9.6e-78 293.5 157 100.0
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 2.0e-46 189.5 118 88.1
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 7.0e-36 154.5 116 75.0
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 4.5e-27 125.2 120 58.3
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 1.3e-26 123.6 147 51.0
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 1.3e-26 123.6 113 58.4
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 1.9e-25 119.8 124 56.5
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 5.5e-25 118.2 105 61.0
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 7.2e-25 117.9 124 53.2
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 7.2e-25 117.9 122 54.1
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 1.6e-24 116.7 113 61.1
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 4.7e-24 115.2 124 52.4
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 4.7e-24 115.2 127 53.5
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 4.7e-24 115.2 132 49.2
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 1.0e-23 114.0 126 52.4
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 1.0e-23 114.0 113 56.6
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 1.0e-23 114.0 136 48.5
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.4e-23 113.6 127 52.8
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 1.4e-23 113.6 124 52.4
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 1.8e-23 113.2 126 50.0
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 1.8e-23 113.2 116 56.0
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 2.3e-23 112.8 124 54.8
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 2.3e-23 112.8 137 50.4
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 2.3e-23 112.8 127 53.5
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 3.0e-23 112.5 119 54.6
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 4.0e-23 112.1 113 54.9
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 4.0e-23 112.1 113 54.9
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 4.0e-23 112.1 167 46.7
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 6.8e-23 111.3 122 52.5
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 6.8e-23 111.3 118 56.8
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 8.8e-23 110.9 116 52.6
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 1.2e-22 110.5 161 42.2
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 1.2e-22 110.5 116 53.4
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 1.2e-22 110.5 120 51.7
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 2.0e-22 109.8 113 52.2
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 2.6e-22 109.4 120 49.2
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 2.6e-22 109.4 113 52.2
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 2.6e-22 109.4 130 46.9
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 2.6e-22 109.4 114 57.0
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 2.6e-22 109.4 120 52.5
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 2.6e-22 109.4 113 54.0
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 3.4e-22 109.0 113 54.0
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 4.4e-22 108.6 117 54.7
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 4.4e-22 108.6 117 55.6
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 4.4e-22 108.6 116 54.3
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 4.4e-22 108.6 132 46.2
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 4.4e-22 108.6 115 53.0
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 5.7e-22 108.2 120 50.8
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 5.7e-22 108.2 117 54.7
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 5.7e-22 108.2 116 50.9
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 5.7e-22 108.2 133 48.1
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 7.5e-22 107.8 120 50.0
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 7.5e-22 107.8 124 49.2
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 9.8e-22 107.5 116 53.4
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 1.7e-21 106.7 116 52.6
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.7e-21 106.7 123 50.4
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 2.8e-21 105.9 109 53.2
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 2.8e-21 105.9 119 47.1
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 3.7e-21 105.5 131 48.9
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 4.8e-21 105.1 128 50.0
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 4.8e-21 105.1 130 48.5
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 4.8e-21 105.1 130 48.5
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 4.8e-21 105.1 113 53.1
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 6.3e-21 104.8 120 48.3
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 6.3e-21 104.8 103 57.3
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 8.3e-21 104.4 120 50.0
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 8.3e-21 104.4 106 57.5
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 8.3e-21 104.4 114 52.6
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 1.1e-20 104.0 130 47.7
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 1.1e-20 104.0 130 47.7
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 1.1e-20 104.0 151 42.4
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 1.4e-20 103.6 120 50.0
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 1.8e-20 103.2 102 53.9
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 2.4e-20 102.8 115 48.7
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 4.1e-20 102.1 115 53.0
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 5.4e-20 101.7 113 50.4
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 5.4e-20 101.7 117 50.4
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 1.2e-19 100.5 118 50.0
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.6e-19 100.1 114 49.1
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 2.0e-19 99.8 113 51.3
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 4.5e-19 98.6 127 48.0
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 7.7e-19 97.8 106 50.9
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 1.7e-18 96.7 144 43.1
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 2.3e-18 96.3 100 54.0
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 3.6e-16 89.0 128 43.0
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 5.2e-15 85.1 173 35.8
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 9.8e-14 80.9 128 40.6
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 9.8e-14 80.9 66 63.6
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 1.8e-12 76.6 84 47.6
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 4.1e-12 75.5 66 62.1
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 7.0e-12 74.7 55 67.3
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 2.9e-10 69.3 85 49.4
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 6.1e-08 61.6 57 54.4
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 1.0e-07 60.8 55 56.4


User provided reference genes

Program Settings