Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb101600 Zea mays HOM05D008064 ORTHO05D000045 6.8e-49 196.8 87 100.0
Zm00001eb103780 Zea mays HOM05D008064 ORTHO05D000045 1.7e-47 192.2 87 98.9
Zm00001eb282170 Zea mays HOM05D008064 ORTHO05D000045 1.7e-47 192.2 87 98.9
Zm00001eb286510 Zea mays HOM05D008064 ORTHO05D000045 1.7e-47 192.2 87 98.9
Zm00001eb241460 Zea mays HOM05D008064 ORTHO05D000045 1.4e-46 189.1 87 97.7
Zm00001eb137660 Zea mays HOM05D008064 ORTHO05D000045 7.8e-45 183.3 87 94.3
Zm00001eb245660 Zea mays HOM05D002425 ORTHO05D002709 7.8e-45 183.3 87 94.3
Zm00001eb337580 Zea mays HOM05D008064 ORTHO05D000045 7.8e-45 183.3 87 94.3
Zm00001eb399410 Zea mays HOM05D008064 ORTHO05D000045 7.8e-45 183.3 87 94.3
Zm00001eb175090 Zea mays HOM05D008064 ORTHO05D000045 2.3e-44 181.8 87 93.1
Zm00001eb340930 Zea mays HOM05D008064 ORTHO05D000045 3.9e-44 181.0 87 90.8
Zm00001eb381320 Zea mays HOM05D008064 ORTHO05D000045 6.6e-44 180.3 87 90.8
Zm00001eb138170 Zea mays HOM05D008064 ORTHO05D000045 1.9e-43 178.7 87 92.0
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 9.5e-43 176.4 87 90.8
Zm00001eb265920 Zea mays HOM05D000096 ORTHO05D000045 1.4e-41 172.6 87 88.5
Zm00001eb385560 Zea mays HOM05D008064 ORTHO05D000045 5.6e-35 150.6 87 75.9
Zm00001eb036820 Zea mays HOM05D008064 ORTHO05D000045 2.8e-34 148.3 71 90.1
Zm00001eb109080 Zea mays HOM05D008064 ORTHO05D000045 2.8e-34 148.3 71 90.1
Zm00001eb238490 Zea mays HOM05D008064 ORTHO05D000045 2.8e-34 148.3 71 90.1
Zm00001eb324940 Zea mays HOM05D008064 ORTHO05D000045 2.8e-34 148.3 71 90.1
Zm00001eb372170 Zea mays HOM05D008064 ORTHO05D000045 2.8e-34 148.3 71 90.1
Zm00001eb373410 Zea mays HOM05D008064 ORTHO05D000045 4.3e-27 124.4 82 67.1
Zm00001eb129720 Zea mays HOM05D008064 ORTHO05D000045 1.6e-26 122.5 67 79.1
Zm00001eb340200 Zea mays HOM05D008270 ORTHO05D000045 7.1e-14 80.5 39 87.2
CAN.G205.1 Capsicum annuum HOM05D000096 ORTHO05D000045 2.1e-13 79.0 70 48.6
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 6.0e-13 77.4 82 45.1
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 8.7e-12 73.6 70 44.3
PGSC0003DMG400016517 Solanum tuberosum HOM05D018632 ORTHO05D018880 8.7e-12 73.6 71 46.5
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.5e-11 72.8 77 44.2
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.9e-11 72.4 82 42.7
SGA_v2.0_scaffold183G39859 Striga asiatica HOM05D000096 ORTHO05D000045 2.5e-11 72.0 62 51.6
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 7.3e-11 70.5 85 43.5
EL10Ac4g07888 Beta vulgaris HOM05D003315 ORTHO05D003407 9.6e-11 70.1 72 48.6
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 1.3e-10 69.7 72 48.6
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.3e-10 69.7 76 42.1
SGA_v2.0_scaffold73G24447 Striga asiatica HOM05D001218 ORTHO05D004088 1.6e-10 69.3 69 47.8
Rhsim02G0156100 Rhododendron simsii HOM05D000096 ORTHO05D000045 2.8e-10 68.6 83 39.8
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 3.6e-10 68.2 70 45.7
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 3.6e-10 68.2 70 45.7
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 3.6e-10 68.2 70 45.7
Peaxi162Scf00371g00316 Petunia axillaris HOM05D002261 ORTHO05D000045 3.6e-10 68.2 62 46.8
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 4.8e-10 67.8 72 45.8
ECA246G4273 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.2e-10 67.4 81 39.5
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 6.2e-10 67.4 79 40.5
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 8.1e-10 67.0 87 41.4
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 1.4e-09 66.2 72 45.8
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 1.8e-09 65.9 72 45.8
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 1.8e-09 65.9 87 41.4
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 2.4e-09 65.5 75 44.0
PSO357G0164 Papaver somniferum HOM05D000096 ORTHO05D000045 2.4e-09 65.5 82 37.8
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.1e-09 65.1 81 39.5
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 4.0e-09 64.7 72 44.4
CAN.G265.7 Capsicum annuum HOM05D000096 ORTHO05D000045 5.3e-09 64.3 76 43.4
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 6.9e-09 63.9 64 45.3
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 6.9e-09 63.9 70 41.4
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.9e-09 63.9 75 40.0
EL10As14g24092 Beta vulgaris HOM05D007854 ORTHO05D010168 9.0e-09 63.5 65 49.2
PSO832G3507 Papaver somniferum HOM05D000096 ORTHO05D000045 9.0e-09 63.5 74 43.2
Hma1.2p1_0115F.1_g055970 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 1.2e-08 63.2 81 39.5
vmacro07726 Vaccinium macrocarpon HOM05D005445 ORTHO05D007043 1.2e-08 63.2 76 43.4
vmacro10242 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 1.2e-08 63.2 76 43.4
EL10Ac1g02149 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-08 62.8 78 41.0
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 2.0e-08 62.4 72 43.1
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 4.4e-08 61.2 69 40.6
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 4.4e-08 61.2 70 41.4
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 1.7e-07 59.3 69 39.1
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 6.4e-07 57.4 68 41.2
EL10Ac2g03227 Beta vulgaris HOM05D000096 ORTHO05D000045 6.4e-07 57.4 70 38.6
FvH4_5g25551 Fragaria vesca HOM05D000096 ORTHO05D000045 8.4e-07 57.0 70 32.9
PSO063G0288 Papaver somniferum HOM05D000096 ORTHO05D000045 8.4e-07 57.0 74 35.1
PSO063G4809 Papaver somniferum HOM05D000096 ORTHO05D000045 8.4e-07 57.0 74 35.1
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 8.4e-07 57.0 78 35.9
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-06 55.5 75 34.7
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 4.2e-06 54.7 65 38.5
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 9.3e-06 53.5 48 50.0


User provided reference genes

Program Settings