Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb098770 Zea mays HOM05D003821 ORTHO05D004449 3.9e-27 124.4 79 100.0
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 8.4e-14 80.1 80 60.0
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 4.3e-10 67.8 84 47.6
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 4.3e-10 67.8 69 55.1
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 5.6e-10 67.4 83 51.8
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 7.4e-10 67.0 83 51.8
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 9.6e-10 66.6 83 44.6
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 1.3e-09 66.2 62 71.0
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.1e-09 65.5 77 50.6
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 2.1e-09 65.5 81 46.9
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 2.8e-09 65.1 75 49.3
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 6.2e-09 63.9 84 44.0
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 8.1e-09 63.5 76 48.7
Nn4g25849 Nelumbo nucifera HOM05D003821 ORTHO05D004449 8.1e-09 63.5 82 56.1
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 1.4e-08 62.8 78 46.2
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 1.4e-08 62.8 81 44.4
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 2.4e-08 62.0 83 48.2
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 2.4e-08 62.0 75 48.0
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 2.4e-08 62.0 62 50.0
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 2.4e-08 62.0 73 46.6
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 5.3e-08 60.8 83 42.2
Pp3c16_4400 Physcomitrium patens HOM05D003821 ORTHO05D004449 1.5e-07 59.3 41 68.3
Gohir.D08G138600 Gossypium hirsutum HOM05D003821 ORTHO05D004449 2.0e-07 58.9 71 62.0
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 2.0e-07 58.9 62 48.4
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 2.0e-07 58.9 81 43.2
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 2.6e-07 58.5 99 42.4
FvH4_2g25350 Fragaria vesca HOM05D003821 ORTHO05D004449 3.4e-07 58.2 75 60.0
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 1.3e-06 56.2 82 47.6
FvH4_4g18020 Fragaria vesca HOM05D003821 ORTHO05D004449 2.9e-06 55.1 74 60.8
BolC8t48318H Brassica oleracea HOM05D003821 ORTHO05D004449 4.9e-06 54.3 81 46.9
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 4.9e-06 54.3 97 37.1


User provided reference genes

Program Settings