Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 5.3e-177 624.4 353 100.0
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.7e-114 416.8 307 70.4
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 7.4e-70 268.5 289 47.4
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 1.3e-69 267.7 289 47.4
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 3.7e-69 266.2 291 48.8
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.7e-69 266.2 289 47.4
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.8e-68 263.8 289 47.4
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 3.1e-68 263.1 289 47.4
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.3e-68 262.3 284 47.2
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 7.0e-68 261.9 307 45.6
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 1.2e-67 261.2 291 47.8
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.6e-67 260.8 286 46.9
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 2.0e-67 260.4 289 47.4
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 3.5e-67 259.6 288 46.9
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.5e-67 259.6 302 45.4
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 7.7e-67 258.5 292 47.6
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 1.0e-66 258.1 286 46.9
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 1.7e-66 257.3 289 46.0
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.7e-66 257.3 292 46.9
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 3.8e-66 256.1 289 46.7
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 5.0e-66 255.8 288 45.5
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 6.5e-66 255.4 286 44.8
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 8.5e-66 255.0 289 48.4
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 8.5e-66 255.0 290 45.9
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 4.2e-65 252.7 291 46.0
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 1.2e-64 251.1 289 46.4
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 1.6e-64 250.8 289 45.7
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 2.1e-64 250.4 305 45.6
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 2.7e-64 250.0 303 44.2
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 2.7e-64 250.0 289 47.1
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 3.6e-64 249.6 290 44.8
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 8.0e-64 248.4 289 45.0
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 1.0e-63 248.1 289 45.3
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 1.0e-63 248.1 280 46.4
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.4e-63 247.7 284 45.4
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 3.0e-63 246.5 296 46.6
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 8.8e-63 245.0 234 52.1
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 1.2e-62 244.6 289 43.9
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.2e-62 244.6 269 48.3
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 1.2e-62 244.6 290 44.8
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.5e-62 244.2 330 42.7
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.5e-62 244.2 294 44.2
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 2.6e-62 243.4 292 44.2
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 3.3e-62 243.0 289 43.6
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 7.5e-62 241.9 289 45.0
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 7.5e-62 241.9 292 45.5
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 7.5e-62 241.9 289 43.6
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 7.5e-62 241.9 297 43.4
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 9.7e-62 241.5 289 43.3
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 9.7e-62 241.5 291 43.6
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.2e-61 240.4 289 43.6
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 2.8e-61 240.0 281 47.0
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 3.7e-61 239.6 289 43.9
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 6.3e-61 238.8 302 43.4
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 6.3e-61 238.8 286 45.8
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 2.4e-60 236.9 297 43.1
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 2.4e-60 236.9 297 43.1
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 2.4e-60 236.9 268 46.6
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 2.4e-60 236.9 292 42.1
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.1e-60 236.1 281 46.6
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 5.3e-60 235.7 289 44.3
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 9.1e-60 235.0 291 42.3
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 1.2e-59 234.6 324 39.8
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 1.6e-59 234.2 303 42.6
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 2.7e-59 233.4 293 42.7
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.7e-59 233.4 286 42.3
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 4.5e-59 232.6 331 41.7
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 5.9e-59 232.3 286 42.0
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 1.0e-58 231.5 286 43.4
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 1.3e-58 231.1 269 44.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.2e-58 230.3 286 41.6
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.9e-58 229.9 292 43.5
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.9e-58 229.9 324 41.4
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.9e-58 229.9 289 42.6
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 3.8e-58 229.6 282 45.4
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 3.8e-58 229.6 297 44.4
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 6.5e-58 228.8 277 45.1
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 4.2e-57 226.1 291 41.9
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 9.4e-57 224.9 293 45.4
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 9.4e-57 224.9 267 43.8
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.2e-56 224.6 265 44.5
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 1.6e-56 224.2 291 42.6
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 1.6e-56 224.2 291 43.0
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 3.6e-56 223.0 297 40.7
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.0e-55 221.5 267 44.9
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 1.8e-55 220.7 230 47.4
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 3.0e-55 219.9 268 43.7
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 2.2e-53 213.8 288 42.0
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 2.8e-53 213.4 265 42.6
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 1.1e-52 211.5 275 42.5
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 4.5e-51 206.1 258 41.5
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 1.7e-50 204.1 211 47.4
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 5.0e-50 202.6 228 42.5
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 4.2e-49 199.5 263 40.7
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.6e-40 171.0 280 36.4
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 2.1e-40 170.6 197 42.1
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 3.4e-38 163.3 301 35.9
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.7e-27 127.1 141 47.5
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 6.0e-27 125.9 237 33.8
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 3.0e-26 123.6 139 43.2
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 8.9e-23 112.1 149 42.3
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 7.1e-20 102.4 124 40.3
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 5.1e-18 96.3 152 40.1
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 1.3e-13 81.6 153 35.9
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 5.4e-12 76.3 176 30.1
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 1.9e-09 67.8 121 33.9
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 1.1e-07 62.0 103 40.8
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.1e-07 62.0 104 36.5
PRCOL_00000891 Prasinoderma coloniale HOM05D006737 ORTHO05D333826 2.4e-07 60.8 243 27.2
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 3.1e-07 60.5 104 35.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 9.9e-06 55.5 151 26.5


User provided reference genes

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