Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 3.3e-275 951.0 472 100.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 3.7e-157 558.9 437 65.9
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 1.1e-156 557.4 403 69.2
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 1.1e-156 557.4 461 64.0
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 2.4e-156 556.2 407 68.1
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 2.4e-156 556.2 399 69.7
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 3.1e-156 555.8 444 64.9
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 4.1e-156 555.4 399 69.4
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 4.1e-156 555.4 411 68.6
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 9.1e-156 554.3 426 65.7
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 2.0e-155 553.1 428 65.0
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 2.0e-155 553.1 450 63.1
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 3.4e-155 552.4 439 65.6
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 7.7e-155 551.2 461 62.7
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 7.7e-155 551.2 414 67.4
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.3e-154 550.4 455 64.4
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.3e-154 550.4 399 68.2
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 1.3e-154 550.4 408 68.4
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 2.2e-154 549.7 406 68.5
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 5.0e-154 548.5 460 60.2
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 5.0e-154 548.5 406 67.2
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 6.5e-154 548.1 406 67.5
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 8.5e-154 547.7 471 60.9
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 8.5e-154 547.7 398 68.6
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.4e-153 547.0 398 67.6
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.5e-153 546.2 411 67.2
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 2.5e-153 546.2 403 67.7
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 2.5e-153 546.2 406 67.2
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 3.2e-153 545.8 399 67.7
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 5.5e-153 545.0 454 63.0
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.5e-153 545.0 440 63.2
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 7.2e-153 544.7 403 67.2
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 1.2e-152 543.9 424 65.3
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 1.2e-152 543.9 427 64.6
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.2e-152 543.9 402 67.4
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.6e-152 543.5 421 64.8
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 2.1e-152 543.1 429 64.3
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 3.6e-152 542.3 403 67.2
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 6.1e-152 541.6 403 67.2
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.0e-151 540.8 399 67.4
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 2.3e-151 539.7 403 68.0
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 3.9e-151 538.9 421 65.3
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 5.2e-151 538.5 422 65.2
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 5.2e-151 538.5 447 62.9
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.1e-150 537.3 444 62.8
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 1.5e-150 537.0 437 64.5
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 3.3e-150 535.8 406 65.5
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 4.4e-150 535.4 399 66.9
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 5.7e-150 535.0 421 64.8
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 7.4e-150 534.6 421 64.8
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 1.7e-149 533.5 410 66.3
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 4.8e-149 531.9 425 63.8
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 4.8e-149 531.9 399 67.4
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 6.3e-149 531.6 445 62.7
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 1.1e-148 530.8 409 65.5
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 2.4e-148 529.6 403 66.3
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 3.1e-148 529.3 448 62.5
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 4.1e-148 528.9 399 66.9
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 1.2e-147 527.3 448 60.9
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 1.0e-146 524.2 405 65.2
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 5.0e-146 521.9 403 65.3
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 4.2e-145 518.8 406 65.5
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 4.7e-144 515.4 426 62.0
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 1.4e-143 513.8 443 60.7
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 7.5e-142 508.1 399 64.9
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 1.3e-141 507.3 358 70.4
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 3.7e-141 505.8 398 64.3
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 2.4e-140 503.1 359 69.4
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 5.9e-139 498.4 359 68.8
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 1.0e-138 497.7 441 59.0
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 2.2e-138 496.5 362 68.0
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 3.8e-138 495.7 408 61.8
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 4.2e-137 492.3 403 64.3
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 9.4e-137 491.1 362 68.0
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 9.4e-137 491.1 417 60.9
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 9.4e-137 491.1 365 67.1
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 1.2e-136 490.7 362 67.4
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 8.8e-135 484.6 405 62.0
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 3.4e-134 482.6 463 56.6
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 3.7e-133 479.2 407 60.0
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 4.8e-133 478.8 418 60.5
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 4.2e-129 465.7 316 72.5
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 1.6e-128 463.8 416 57.7
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 3.6e-128 462.6 421 57.0
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 5.7e-126 455.3 423 57.7
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 8.3e-125 451.4 402 60.7
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 5.0e-122 442.2 331 66.5
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 2.4e-116 423.3 299 69.6
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.7e-114 417.2 349 62.5
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 5.0e-114 415.6 432 52.8
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 3.4e-110 402.9 438 49.5
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 7.8e-107 391.7 400 52.8
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 1.6e-104 384.0 249 75.1
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 7.3e-97 358.6 417 46.8
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 4.7e-96 355.9 417 48.2
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 2.5e-81 307.0 243 62.1
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 9.0e-79 298.5 320 51.6
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 2.6e-70 270.4 460 42.2
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.5e-65 254.6 203 60.6
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 8.2e-64 248.8 328 47.9
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 8.2e-64 248.8 226 60.2
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 3.1e-63 246.9 328 47.9
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 6.9e-55 219.2 214 56.5
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 2.0e-54 217.6 180 60.0
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 3.2e-44 183.7 182 50.0
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 7.2e-44 182.6 311 44.7
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 4.7e-35 153.3 93 78.5
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 1.8e-26 124.8 89 69.7
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 4.8e-24 116.7 103 58.3
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 2.7e-19 100.9 63 76.2
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 3.1e-15 87.4 60 71.7
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 2.0e-09 68.2 42 81.0


User provided reference genes

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