Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 2.2e-112 409.1 220 100.0
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 3.6e-62 242.3 157 89.2
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 4.2e-39 165.6 159 68.6
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 4.3e-23 112.5 64 93.8
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 1.2e-22 110.9 160 47.5
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.4e-21 107.5 123 48.8
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 1.4e-21 107.5 125 48.0
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.8e-21 107.1 123 48.0
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 2.3e-21 106.7 158 43.7
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 3.0e-21 106.3 201 37.8
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 3.0e-21 106.3 125 49.6
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 4.0e-21 105.9 167 40.1
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 4.0e-21 105.9 124 47.6
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 5.2e-21 105.5 65 87.7
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 6.8e-21 105.1 157 40.1
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 8.9e-21 104.8 157 40.8
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 8.9e-21 104.8 157 40.8
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 8.9e-21 104.8 157 43.3
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 8.9e-21 104.8 158 40.5
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.2e-20 104.4 156 42.3
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 1.5e-20 104.0 124 46.8
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 2.0e-20 103.6 156 41.7
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 2.6e-20 103.2 185 38.9
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.6e-20 103.2 185 38.9
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.6e-20 103.2 185 38.9
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.4e-20 102.8 183 39.3
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 3.4e-20 102.8 158 39.2
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 5.7e-20 102.1 151 41.7
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 5.7e-20 102.1 153 41.2
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 7.5e-20 101.7 128 44.5
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 7.5e-20 101.7 128 46.9
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 7.5e-20 101.7 124 49.2
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.3e-19 100.9 130 47.7
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 1.7e-19 100.5 125 46.4
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 1.7e-19 100.5 127 45.7
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.7e-19 100.5 157 43.9
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.7e-19 100.5 165 38.2
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.2e-19 100.1 169 39.6
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.2e-19 100.1 182 39.0
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.2e-19 100.1 154 39.6
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 3.7e-19 99.4 203 35.0
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 3.7e-19 99.4 167 37.7
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 6.4e-19 98.6 123 45.5
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 6.4e-19 98.6 159 40.3
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 8.3e-19 98.2 170 41.2
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 8.3e-19 98.2 128 43.0
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 1.1e-18 97.8 123 47.2
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 1.4e-18 97.4 162 40.1
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 2.4e-18 96.7 167 39.5
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 3.2e-18 96.3 66 84.8
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 5.4e-18 95.5 169 40.2
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 5.4e-18 95.5 169 40.2
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 5.4e-18 95.5 156 43.6
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 5.4e-18 95.5 163 39.3
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 7.0e-18 95.1 156 41.0
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 9.2e-18 94.7 161 39.1
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 1.2e-17 94.4 158 39.9
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.2e-17 94.4 158 41.1
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.2e-17 94.4 167 36.5
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.2e-17 94.4 124 44.4
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.2e-17 94.4 160 38.8
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.6e-17 94.0 156 41.0
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.0e-17 93.6 161 38.5
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 2.0e-17 93.6 150 41.3
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.7e-17 93.2 159 40.9
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 3.5e-17 92.8 129 45.7
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 3.5e-17 92.8 162 42.0
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 3.5e-17 92.8 158 39.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 4.6e-17 92.4 151 41.1
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 5.9e-17 92.0 127 45.7
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 5.9e-17 92.0 128 42.2
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 7.8e-17 91.7 152 40.1
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 1.0e-16 91.3 160 39.4
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.3e-16 90.9 156 40.4
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 1.3e-16 90.9 158 39.9
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.3e-16 90.9 126 43.7
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 1.7e-16 90.5 162 36.4
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.7e-16 90.5 166 38.0
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.7e-16 90.5 166 38.0
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 2.3e-16 90.1 198 36.4
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 3.0e-16 89.7 164 38.4
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 3.0e-16 89.7 164 38.4
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 3.9e-16 89.4 158 41.1
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 3.9e-16 89.4 185 37.8
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 3.9e-16 89.4 128 44.5
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 8.6e-16 88.2 167 36.5
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.1e-15 87.8 160 36.2
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 1.1e-15 87.8 159 35.8
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.5e-15 87.4 126 42.1
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.5e-15 87.4 133 42.1
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 1.9e-15 87.0 151 39.1
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 1.9e-15 87.0 117 47.0
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 2.5e-15 86.7 155 38.1
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 2.5e-15 86.7 118 44.9
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 4.3e-15 85.9 156 37.8
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.5e-15 84.7 184 37.5
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 4.7e-14 82.4 161 41.6
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 3.1e-13 79.7 154 35.1
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 4.0e-13 79.3 128 48.4
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 5.2e-13 79.0 121 41.3
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 3.4e-12 76.3 93 47.3
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 5.8e-12 75.5 118 39.0
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 5.8e-12 75.5 122 35.2
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 9.8e-12 74.7 176 35.2
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 2.2e-11 73.6 156 39.7
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 6.4e-11 72.0 119 38.7
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.1e-10 71.2 136 36.0
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 4.1e-10 69.3 159 32.7
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 5.4e-10 68.9 127 37.0
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 3.5e-09 66.2 157 30.6


User provided reference genes

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