Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb091580 Zea mays HOM05D005231 ORTHO05D006387 2.3e-151 538.9 272 100.0
Zm00001eb201030 Zea mays HOM05D005231 ORTHO05D006387 5.6e-142 507.7 272 94.1
Os11g0175900 Oryza sativa ssp. japonica HOM05D005231 ORTHO05D006387 1.2e-136 490.0 272 90.8
Os02g0793100 Oryza sativa ssp. japonica HOM05D005231 ORTHO05D006387 8.7e-135 483.8 271 89.7
Ca_26723_v3 Cicer arietinum L. HOM05D005231 ORTHO05D006387 2.0e-115 419.5 274 77.7
Manes.17G106200 Manihot esculenta HOM05D005231 ORTHO05D006387 1.4e-113 413.3 279 76.7
MD06G1184100 Malus domestica HOM05D005231 ORTHO05D006387 5.5e-113 411.4 287 74.9
TPR.G38280 Trifolium pratense HOM05D005231 ORTHO05D006387 2.7e-112 409.1 273 76.2
Peaxi162Scf00224g00118 Petunia axillaris HOM05D005231 ORTHO05D006387 3.5e-112 408.7 279 73.8
Psat3g170000 Pisum sativum HOM05D005231 ORTHO05D006387 4.6e-112 408.3 274 76.3
Phvul.001G096100 Phaseolus vulgaris HOM05D005231 ORTHO05D006387 6.1e-112 407.9 274 75.9
Solyc11g068640.2 Solanum lycopersicum HOM05D005231 ORTHO05D006387 2.3e-111 406.0 281 73.7
Sopen11g027360 Solanum pennellii HOM05D005231 ORTHO05D006387 2.3e-111 406.0 281 73.7
VMungo1215G0650 Vigna mungo HOM05D005231 ORTHO05D006387 3.0e-111 405.6 274 75.5
CiPaw.03G052100 Carya illinoinensis HOM05D005231 ORTHO05D006387 6.7e-111 404.4 284 73.9
Medtr7g031450 Medicago truncatula HOM05D005231 ORTHO05D006387 6.7e-111 404.4 274 75.9
Nitab4.5_0006008g0040 Nicotiana tabacum HOM05D005231 ORTHO05D006387 6.7e-111 404.4 283 73.5
QL02p072461 Quercus lobata HOM05D005231 ORTHO05D006387 6.7e-111 404.4 274 75.9
Haze_14831 Corylus avellana HOM05D005231 ORTHO05D006387 1.5e-110 403.3 282 75.5
Nitab4.5_0000731g0120 Nicotiana tabacum HOM05D005231 ORTHO05D006387 1.5e-110 403.3 281 73.3
Hma1.2p1_0571F.1_g180760 Hydrangea macrophylla HOM05D005231 ORTHO05D006387 2.5e-110 402.5 272 76.5
Prupe.5G183000 Prunus persica HOM05D005231 ORTHO05D006387 2.5e-110 402.5 288 72.9
Ciclev10014086m.g Citrus clementina HOM05D005231 ORTHO05D006387 4.3e-110 401.7 280 75.4
CAN.G745.7 Capsicum annuum HOM05D005231 ORTHO05D006387 9.7e-110 400.6 280 73.2
COL.COLO4_08767 Corchorus olitorius HOM05D005231 ORTHO05D006387 9.7e-110 400.6 277 74.4
Lj7A607T31 Lonicera japonica HOM05D005231 ORTHO05D006387 1.3e-109 400.2 284 73.2
Lj1g0000655 Lotus japonicus HOM05D005231 ORTHO05D006387 1.3e-109 400.2 274 74.8
Thecc.04G029800 Theobroma cacao HOM05D005231 ORTHO05D006387 1.6e-109 399.8 274 75.9
Aqoxy5G03474 Aquilegia oxysepala HOM05D005231 ORTHO05D006387 2.2e-109 399.4 298 71.5
Aqoxy5G03496 Aquilegia oxysepala HOM05D005231 ORTHO05D006387 2.2e-109 399.4 298 71.5
Cfa007256 Carpinus fangiana HOM05D005231 ORTHO05D006387 2.2e-109 399.4 281 74.4
TAR371G0773 Trochodendron aralioides HOM05D005231 ORTHO05D006387 2.2e-109 399.4 287 72.1
unitig_21.g20479 Utricularia gibba HOM05D005231 ORTHO05D006387 2.2e-109 399.4 270 74.1
Gorai.006G039900 Gossypium raimondii HOM05D005231 ORTHO05D006387 2.8e-109 399.1 280 73.9
Oeu050427.1 Olea europaea HOM05D005231 ORTHO05D006387 3.7e-109 398.7 273 74.7
Cc07_g00560 Coffea canephora HOM05D005231 ORTHO05D006387 4.8e-109 398.3 280 73.2
Glyma.19G086600 Glycine max HOM05D005231 ORTHO05D006387 4.8e-109 398.3 275 75.3
Gohir.D09G035000 Gossypium hirsutum HOM05D005231 ORTHO05D006387 4.8e-109 398.3 278 74.1
Actinidia30894 Actinidia chinensis HOM05D005231 ORTHO05D006387 6.3e-109 397.9 283 73.5
Duzib264G1000 Durio zibethinus HOM05D005231 ORTHO05D006387 6.3e-109 397.9 279 74.2
CiPaw.04G034400 Carya illinoinensis HOM05D005231 ORTHO05D006387 8.2e-109 397.5 282 72.7
MSTRG.3095 Avicennia marina HOM05D005231 ORTHO05D006387 1.1e-108 397.1 282 72.3
Atru.chr6.2511 Acer truncatum HOM05D005231 ORTHO05D006387 1.4e-108 396.7 276 75.0
TWI36G1540 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 1.4e-108 396.7 288 72.2
FAN08G2159 Fragaria x ananassa HOM05D005231 ORTHO05D006387 2.4e-108 396.0 284 72.9
CSS0002510 Camellia sinensis var. sinensis HOM05D005231 ORTHO05D006387 3.1e-108 395.6 279 74.6
FAN13G1708 Fragaria x ananassa HOM05D005231 ORTHO05D006387 3.1e-108 395.6 285 72.6
Lalb_Chr14g0363091 Lupinus albus HOM05D005231 ORTHO05D006387 3.1e-108 395.6 279 74.6
Rhsim08G0045200 Rhododendron simsii HOM05D005231 ORTHO05D006387 3.1e-108 395.6 276 73.9
DCAR_021762 Daucus carota HOM05D005231 ORTHO05D006387 5.3e-108 394.8 284 72.5
Migut.K01445 Erythranthe guttata HOM05D005231 ORTHO05D006387 6.9e-108 394.4 283 72.8
Eucgr.I01665 Eucalyptus grandis HOM05D005231 ORTHO05D006387 6.9e-108 394.4 290 71.4
FvH4_5g15940 Fragaria vesca HOM05D005231 ORTHO05D006387 6.9e-108 394.4 287 72.5
arahy.Tifrunner.gnm1.ann1.L2Q6WP Arachis hypogaea HOM05D005231 ORTHO05D006387 9.0e-108 394.0 274 74.5
FAN18G1846 Fragaria x ananassa HOM05D005231 ORTHO05D006387 9.0e-108 394.0 286 72.0
RcHm_v2.0_Chr7g0180111 Rosa chinensis HOM05D005231 ORTHO05D006387 1.2e-107 393.7 286 72.4
CsaV3_3G015940 Cucumis sativus L. HOM05D005231 ORTHO05D006387 1.5e-107 393.3 286 73.4
arahy.Tifrunner.gnm1.ann1.M0JNNK Arachis hypogaea HOM05D005231 ORTHO05D006387 2.0e-107 392.9 274 74.1
Duzib147G1087 Durio zibethinus HOM05D005231 ORTHO05D006387 2.0e-107 392.9 276 74.3
ClCG05G007180 Citrullus lanatus HOM05D005231 ORTHO05D006387 2.6e-107 392.5 284 73.2
Gohir.A09G034100 Gossypium hirsutum HOM05D005231 ORTHO05D006387 2.6e-107 392.5 280 73.2
CANSAT64G0673 Cannabis sativa HOM05D005231 ORTHO05D006387 3.4e-107 392.1 288 71.2
Dinv25680 Davidia involucrata HOM05D005231 ORTHO05D006387 4.5e-107 391.7 281 73.0
Potri.001G334300 Populus trichocarpa HOM05D005231 ORTHO05D006387 5.9e-107 391.3 280 72.1
Sabra16G0215400 Salix brachista HOM05D005231 ORTHO05D006387 1.0e-106 390.6 281 71.9
ECA238G4317 Erigeron canadensis HOM05D005231 ORTHO05D006387 2.2e-106 389.4 281 70.1
FAN04G1242 Fragaria x ananassa HOM05D005231 ORTHO05D006387 2.2e-106 389.4 287 71.8
Hund15390 Selenicereus undatus HOM05D005231 ORTHO05D006387 2.2e-106 389.4 281 71.5
TWI12G0663 Tripterygium wilfordii HOM05D005231 ORTHO05D006387 8.5e-106 387.5 290 71.0
GSVIVG01001825001 Vitis vinifera HOM05D005231 ORTHO05D006387 8.5e-106 387.5 265 75.5
Aa31LG5G10910 Aethionema arabicum HOM05D005231 ORTHO05D006387 1.1e-105 387.1 279 72.4
Glyma.16G060500 Glycine max HOM05D005231 ORTHO05D006387 1.1e-105 387.1 276 73.2
Sed0020589 Sechium edule HOM05D005231 ORTHO05D006387 4.2e-105 385.2 280 72.5
PSO782G5010 Papaver somniferum HOM05D005231 ORTHO05D006387 5.5e-105 384.8 288 70.1
Sc03g0006820 Simmondsia chinensis HOM05D005231 ORTHO05D006387 2.1e-104 382.9 290 68.3
A02p30380 Brassica napus HOM05D005231 ORTHO05D006387 3.6e-104 382.1 279 71.3
Nn2g10551 Nelumbo nucifera HOM05D005231 ORTHO05D006387 3.6e-104 382.1 274 72.6
C02p47900 Brassica napus HOM05D005231 ORTHO05D006387 3.9e-103 378.6 283 70.0
BolC2t10823H Brassica oleracea HOM05D005231 ORTHO05D006387 3.9e-103 378.6 283 70.0
HanXRQChr14g0450911 Helianthus annuus HOM05D005231 ORTHO05D006387 3.9e-103 378.6 277 70.0
THA.LOC104822412 Tarenaya hassleriana HOM05D005231 ORTHO05D006387 3.9e-103 378.6 281 70.1
Sp3g00280 Schrenkiella parvula HOM05D005231 ORTHO05D006387 5.1e-103 378.3 279 70.6
BraA02t08053Z Brassica rapa HOM05D005231 ORTHO05D006387 2.0e-102 376.3 279 70.6
Thhalv10019930m.g Eutrema salsugineum HOM05D005231 ORTHO05D006387 2.5e-102 375.9 282 69.5
MELO3C006791.2 Cucumis melo HOM05D005231 ORTHO05D006387 3.3e-102 375.6 269 73.2
Ah.01g004700 Amaranthus hybridus HOM05D005231 ORTHO05D006387 1.3e-101 373.6 282 68.8
Carub.0003s0028 Capsella rubella HOM05D005231 ORTHO05D006387 1.3e-101 373.6 278 70.1
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 1.3e-101 373.6 269 70.3
PGR142G3743 Punica granatum HOM05D005231 ORTHO05D006387 1.7e-101 373.2 320 63.8
ATR0693G284 Amborella trichopoda HOM05D005231 ORTHO05D006387 2.2e-101 372.9 269 72.1
PSO063G5961 Papaver somniferum HOM05D005231 ORTHO05D006387 2.8e-101 372.5 288 69.1
AL3G10350 Arabidopsis lyrata HOM05D005231 ORTHO05D006387 4.8e-101 371.7 289 68.2
AT3G01780 Arabidopsis thaliana HOM05D005231 ORTHO05D006387 8.2e-101 370.9 289 67.8
CDE07G1517 Ceratophyllum demersum HOM05D005231 ORTHO05D006387 1.1e-100 370.5 278 70.9
EL10Ac6g14067 Beta vulgaris HOM05D005231 ORTHO05D006387 1.8e-100 369.8 287 67.2
CARHR075150 Cardamine hirsuta HOM05D005231 ORTHO05D006387 9.1e-100 367.5 297 66.0
SalBow1G7136 Salvia bowleyana HOM05D005231 ORTHO05D006387 1.5e-99 366.7 273 69.6
Lsat_1_v5_gn_2_93920 Lactuca sativa HOM05D005231 ORTHO05D006387 1.3e-98 363.6 279 68.1
vmacro18325 Vaccinium macrocarpon HOM05D005231 ORTHO05D006387 4.7e-96 355.1 386 54.1
SHI03892 Sapria himalayana HOM05D005231 ORTHO05D006387 3.9e-95 352.1 276 65.9
Nn4g22395 Nelumbo nucifera HOM05D005231 ORTHO05D006387 6.7e-95 351.3 205 83.4
Dinv33367 Davidia involucrata HOM05D005231 ORTHO05D006387 3.3e-94 349.0 247 73.7
SGA_v2.0_scaffold47G17578 Striga asiatica HOM05D005231 ORTHO05D006387 4.4e-94 348.6 215 79.1
BcaC03g16893 Brassica carinata HOM05D005231 ORTHO05D006387 7.4e-94 347.8 214 79.9
AUR62038505 Chenopodium quinoa HOM05D005231 ORTHO05D006387 3.7e-93 345.5 206 80.6
SEGI_09869 Sequoiadendron giganteum HOM05D005231 ORTHO05D006387 1.1e-92 344.0 264 67.4
AUR62014230 Chenopodium quinoa HOM05D005231 ORTHO05D006387 1.8e-76 290.0 259 60.6
SMO143G0109 Selaginella moellendorffii HOM05D005231 ORTHO05D006387 8.0e-72 274.6 268 52.6
Pp3c14_16610 Physcomitrium patens HOM05D005231 ORTHO05D006387 8.3e-69 264.6 265 52.8
Pp3c2_2820 Physcomitrium patens HOM05D005231 ORTHO05D006387 4.5e-67 258.8 270 51.1
AagrBONN_evm.TU.Sc2ySwM_344.3213 Anthoceros agrestis HOM05D005231 ORTHO05D006387 5.9e-67 258.5 258 53.9
Mapoly0078s0040 Marchantia polymorpha HOM05D005231 ORTHO05D006387 8.6e-66 254.6 260 51.9
Pp3c10_18980 Physcomitrium patens HOM05D005231 ORTHO05D006387 7.3e-65 251.5 272 52.2
Cpa.g.sc130.10 Carica papaya HOM05D005231 ORTHO05D006387 1.1e-49 201.1 162 67.9
CBR_g21747 Chara braunii HOM05D005231 ORTHO05D006387 1.0e-42 177.9 262 37.0
BcaB01g00417 Brassica carinata HOM05D005231 ORTHO05D006387 2.1e-40 170.2 104 77.9
BraA03t12406Z Brassica rapa HOM05D002210 ORTHO05D002304 1.9e-33 147.1 78 88.5
AUR62014240 Chenopodium quinoa HOM05D005231 ORTHO05D006387 1.1e-17 94.7 54 77.8
C03p39410 Brassica napus HOM05D005231 ORTHO05D006387 4.8e-16 89.4 90 60.0


User provided reference genes

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