Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb091160 Zea mays HOM05D008576 ORTHO05D000385 8.9e-154 547.0 290 100.0
Zm00001eb092990 Zea mays HOM05D008576 ORTHO05D000385 9.3e-127 457.2 411 67.4
Zm00001eb029070 Zea mays HOM05D008576 ORTHO05D000385 9.9e-121 437.2 474 58.6
Zm00001eb425380 Zea mays HOM05D008576 ORTHO05D000385 4.9e-120 434.9 474 58.4
Zm00001eb395400 Zea mays HOM05D008576 ORTHO05D000385 6.4e-120 434.5 343 70.3
Zm00001eb184880 Zea mays HOM05D008576 ORTHO05D000385 1.9e-103 379.8 474 50.8
Zm00001eb438630 Zea mays HOM05D008576 ORTHO05D000385 1.9e-103 379.8 474 50.8
Zm00001eb439020 Zea mays HOM05D008576 ORTHO05D000385 1.9e-103 379.8 474 50.8
Zm00001eb333630 Zea mays HOM05D008576 ORTHO05D000385 2.1e-102 376.3 474 50.2
Zm00001eb093010 Zea mays HOM05D008576 ORTHO05D000385 1.8e-101 373.2 309 73.5
Zm00001eb384730 Zea mays HOM05D008576 ORTHO05D000385 1.1e-90 337.4 474 46.8
Zm00001eb181280 Zea mays HOM05D008576 ORTHO05D000385 6.5e-88 328.2 291 64.3
Zm00001eb190070 Zea mays HOM05D008576 ORTHO05D000385 6.1e-86 321.6 474 45.6
Zm00001eb027370 Zea mays HOM05D008576 ORTHO05D000385 1.0e-85 320.9 420 52.9
Zm00001eb234630 Zea mays HOM05D008576 ORTHO05D000385 5.2e-85 318.5 425 48.0
Zm00001eb390290 Zea mays HOM05D008576 ORTHO05D000385 2.3e-77 293.1 397 52.6
Zm00001eb182790 Zea mays HOM05D008576 ORTHO05D000385 1.2e-62 244.2 383 47.5
Zm00001eb226540 Zea mays HOM05D008576 ORTHO05D000385 2.3e-56 223.4 306 42.8
Zm00001eb239860 Zea mays HOM05D008576 ORTHO05D000385 1.1e-55 221.1 288 45.8
Zm00001eb354780 Zea mays HOM05D008576 ORTHO05D000385 1.6e-49 200.7 351 37.9
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 7.8e-49 198.4 527 30.7
Zm00001eb086350 Zea mays HOM05D008576 ORTHO05D000385 5.0e-48 195.7 348 37.9
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 3.4e-44 183.0 520 30.2
Zm00001eb420260 Zea mays HOM05D002305 ORTHO05D000385 1.6e-33 147.5 103 68.9
Zm00001eb235160 Zea mays HOM05D002305 ORTHO05D000385 3.5e-33 146.4 103 68.9
Zm00001eb029790 Zea mays HOM05D008576 ORTHO05D000385 3.9e-32 142.9 270 38.5
Zm00001eb040590 Zea mays HOM05D008576 ORTHO05D000385 1.5e-31 141.0 103 67.0
Zm00001eb133410 Zea mays HOM05D002305 ORTHO05D002528 1.1e-26 124.8 152 46.7
Zm00001eb315670 Zea mays HOM05D008576 ORTHO05D000385 4.6e-25 119.4 166 42.8
Zm00001eb269580 Zea mays HOM05D008576 ORTHO05D000385 3.1e-21 106.7 187 41.2
Zm00001eb308920 Zea mays HOM05D008576 ORTHO05D000385 2.4e-18 97.1 235 31.9
Zm00001eb388400 Zea mays HOM05D008576 ORTHO05D000385 2.4e-18 97.1 235 31.9
Os02g0129000 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 3.0e-16 90.1 85 55.3
Os07g0212400 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 3.0e-16 90.1 85 55.3
Os08g0367300 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 3.0e-16 90.1 85 55.3
Os10g0343500 Oryza sativa ssp. japonica HOM05D008576 ORTHO05D000385 4.3e-15 86.3 85 54.1
Zm00001eb132600 Zea mays HOM05D002305 ORTHO05D000385 2.1e-14 84.0 58 65.5
Zm00001eb187180 Zea mays HOM05D002305 ORTHO05D002528 2.8e-14 83.6 60 65.0
Zm00001eb090520 Zea mays HOM05D008576 ORTHO05D000385 1.1e-13 81.6 40 97.5
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.9e-11 73.6 96 41.7
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.8e-11 73.2 281 24.9
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.4e-11 72.4 253 29.6
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.4e-11 72.0 242 24.8
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.4e-11 72.0 83 44.6
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 8.4e-11 72.0 312 23.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.2e-10 70.1 75 42.7
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.2e-10 70.1 67 43.3
MBI09_g23028_MAGBIO Magnolia biondii HOM05D008488 ORTHO05D000385 4.2e-10 69.7 75 45.3
Zm00001eb181050 Zea mays HOM05D008576 ORTHO05D000385 1.2e-09 68.2 40 77.5
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-09 67.8 90 41.1
MBI02_g35833_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.6e-09 67.8 246 23.6
MBI19_g42303_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 1.6e-09 67.8 74 44.6
Zm00001eb091610 Zea mays HOM05D030228 ORTHO05D000385 2.1e-09 67.4 89 37.1
Zm00001eb176130 Zea mays HOM05D030228 ORTHO05D000385 2.1e-09 67.4 89 37.1
Zm00001eb277500 Zea mays HOM05D030228 ORTHO05D000385 2.1e-09 67.4 89 37.1
Zm00001eb385360 Zea mays HOM05D030228 ORTHO05D000385 2.1e-09 67.4 89 37.1
MBI19_g12819_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.0e-09 65.9 76 44.7
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.9e-09 65.5 240 28.8
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.0e-08 65.1 255 24.3
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.0e-08 65.1 255 24.3
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-08 64.7 282 24.8
MBI01_g02357_MAGBIO Magnolia biondii HOM05D008488 ORTHO05D000385 1.8e-08 64.3 72 43.1
MBI16_g15341_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-08 63.5 115 31.3
Zm00001eb218570 Zea mays HOM05D008576 ORTHO05D000385 8.7e-08 62.0 41 75.6
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.1e-07 61.6 101 30.7
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 5.6e-07 59.3 82 37.8
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-06 57.4 228 25.0
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.1e-06 57.4 96 31.2
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 2.8e-06 57.0 80 37.5
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.8e-06 57.0 96 31.2
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.2e-06 55.8 233 25.3
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.1e-06 55.5 238 23.9
ECA234G1560 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.1e-06 55.5 119 31.1


User provided reference genes

Program Settings