Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 2.5e-32 141.7 83 100.0
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 5.2e-14 80.9 81 66.7
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.5e-13 77.0 81 54.3
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.8e-11 72.4 81 54.3
SMO277G0001 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 2.4e-11 72.0 81 51.9
SMO197G0116 Selaginella moellendorffii HOM05D030254 ORTHO05D002930 3.1e-11 71.6 80 50.0
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.0e-10 68.9 45 66.7
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 2.0e-10 68.9 78 56.4
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 7.7e-10 67.0 77 53.2
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.8e-09 64.7 43 69.8
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.0e-09 64.3 61 49.2
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.0e-09 64.3 61 49.2
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.0e-09 64.3 61 49.2
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 5.0e-09 64.3 82 52.4
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 6.5e-09 63.9 79 51.9
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.5e-08 62.8 44 63.6
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.5e-08 62.8 81 54.3
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 1.9e-08 62.4 40 77.5
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 7.2e-08 60.5 77 49.4
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.6e-07 59.3 48 68.8
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.6e-07 59.3 48 64.6
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.6e-07 59.3 48 64.6
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.6e-07 59.3 48 64.6
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.1e-07 58.9 31 83.9
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.6e-07 58.2 80 50.0
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 4.7e-07 57.8 81 44.4
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.7e-07 57.8 48 62.5
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.7e-07 57.8 81 53.1
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 6.1e-07 57.4 30 83.3
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 6.1e-07 57.4 33 78.8
Os01g0963600 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 8.0e-07 57.0 34 76.5
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.0e-07 57.0 56 53.6
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 1.0e-06 56.6 77 57.1
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 1.0e-06 56.6 77 55.8
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.0e-06 56.6 47 68.1
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 1.0e-06 56.6 81 55.6
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.0e-06 56.6 43 60.5
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.0e-06 56.6 30 86.7
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.0e-06 56.6 60 50.0
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-06 56.2 43 55.8
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.4e-06 56.2 81 42.0
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 1.8e-06 55.8 38 65.8
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.8e-06 55.8 31 80.6
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 2.3e-06 55.5 45 57.8
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.3e-06 55.5 83 45.8
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.3e-06 55.5 43 58.1
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.0e-06 55.1 36 63.9
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.0e-06 55.1 46 67.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 4.0e-06 54.7 31 77.4
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.0e-06 54.7 31 77.4
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 5.2e-06 54.3 82 53.7
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 5.2e-06 54.3 82 53.7
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.8e-06 53.9 39 64.1
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 6.8e-06 53.9 33 69.7
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 6.8e-06 53.9 76 56.6
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 6.8e-06 53.9 70 42.9
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 8.8e-06 53.5 80 48.8
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 8.8e-06 53.5 82 48.8
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.8e-06 53.5 45 53.3
SEGI_03171 Sequoiadendron giganteum HOM05D000025 ORTHO05D000450 8.8e-06 53.5 33 72.7
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 8.8e-06 53.5 29 82.8


User provided reference genes

Program Settings