Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb083060 Zea mays HOM05D009075 ORTHO05D011069 6.6e-279 963.4 481 100.0
Zm00001eb083050 Zea mays HOM05D009075 ORTHO05D011069 3.6e-160 568.9 465 66.7
Zm00001eb083100 Zea mays HOM05D009075 ORTHO05D011069 6.0e-139 498.4 453 60.0
Zm00001eb240250 Zea mays HOM05D009075 ORTHO05D011069 1.8e-135 486.9 474 54.9
Zm00001eb240300 Zea mays HOM05D009075 ORTHO05D011069 1.2e-126 457.6 474 54.6
Zm00001eb240290 Zea mays HOM05D009075 ORTHO05D011069 2.0e-126 456.8 470 54.3
Zm00001eb284060 Zea mays HOM05D009075 ORTHO05D011069 5.0e-117 425.6 416 57.9
Zm00001eb284040 Zea mays HOM05D009075 ORTHO05D011069 1.4e-106 391.0 390 53.1
Zm00001eb284050 Zea mays HOM05D009075 ORTHO05D011069 2.3e-106 390.2 358 57.8
Zm00001eb083090 Zea mays HOM05D009075 ORTHO05D011069 7.4e-97 358.6 338 60.9
Zm00001eb192970 Zea mays HOM05D009075 ORTHO05D011069 1.2e-59 235.0 428 37.4
Zm00001eb130660 Zea mays HOM05D009075 ORTHO05D011069 7.5e-57 225.7 415 38.6
Zm00001eb130840 Zea mays HOM05D009075 ORTHO05D011069 1.6e-51 208.0 425 35.3
Zm00001eb240260 Zea mays HOM05D009075 ORTHO05D011069 2.1e-51 207.6 277 45.8
Zm00001eb119380 Zea mays HOM05D009075 ORTHO05D011069 1.5e-49 201.4 212 47.6
Zm00001eb240270 Zea mays HOM05D009075 ORTHO05D011069 3.2e-39 167.2 140 57.1
Os01g0244000 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 8.7e-37 159.1 436 28.9
Os12g0162800 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 5.6e-36 156.4 384 29.2
Zm00001eb083080 Zea mays HOM05D009075 ORTHO05D011069 8.1e-27 125.9 90 70.0
Os01g0244400 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.1e-26 125.6 427 27.9
Os01g0245700 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 1.1e-26 125.6 431 27.8
Os01g0245901 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 4.0e-26 123.6 448 27.5
Os01g0245532 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 7.6e-25 119.4 415 27.2
Zm00001eb119370 Zea mays HOM05D009075 ORTHO05D442252 2.1e-19 101.3 156 40.4
Zm00001eb234910 Zea mays HOM05D009075 ORTHO05D011069 1.5e-17 95.1 261 29.1
Zm00001eb243430 Zea mays HOM05D009075 ORTHO05D011069 3.8e-16 90.5 175 34.9
Os06g0307900 Oryza sativa ssp. japonica HOM05D009075 ORTHO05D011069 6.0e-14 83.2 382 25.4
Os05g0467700 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 1.1e-12 79.0 174 29.3
Ah.02g113440 Amaranthus hybridus HOM05D017185 ORTHO05D002895 4.5e-09 67.0 397 23.9
Os05g0249800 Oryza sativa ssp. japonica HOM05D014877 ORTHO05D017093 2.9e-08 64.3 236 27.1
Os03g0789900 Oryza sativa ssp. japonica HOM05D016757 ORTHO05D011069 3.8e-08 63.9 191 22.5
Os03g0247300 Oryza sativa ssp. japonica HOM05D020165 ORTHO05D025971 1.2e-06 58.9 148 28.4


User provided reference genes

Program Settings