Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 3.7e-79 298.1 149 100.0
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 2.1e-13 79.7 149 34.2
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.6e-10 70.1 135 35.6
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 4.8e-10 68.6 146 31.5
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 6.2e-10 68.2 121 34.7
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 5.3e-09 65.1 130 33.8
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 6.9e-09 64.7 131 32.1
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 6.9e-09 64.7 145 31.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.5e-08 63.5 146 30.1
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.5e-08 63.5 127 27.6
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 2.0e-08 63.2 128 32.0
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 2.0e-08 63.2 126 29.4
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 2.0e-08 63.2 131 31.3
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 2.6e-08 62.8 120 29.2
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 2.6e-08 62.8 140 31.4
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 3.4e-08 62.4 146 32.9
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 4.5e-08 62.0 134 26.9
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 4.5e-08 62.0 120 30.0
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 4.5e-08 62.0 120 29.2
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 5.8e-08 61.6 130 28.5
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 7.6e-08 61.2 110 36.4
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 7.6e-08 61.2 131 30.5
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 1.7e-07 60.1 111 35.1
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.7e-07 60.1 130 28.5
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 2.9e-07 59.3 131 31.3
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 6.4e-07 58.2 124 33.1
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 8.4e-07 57.8 110 34.5
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 1.1e-06 57.4 118 34.7
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 2.4e-06 56.2 123 29.3
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 2.4e-06 56.2 133 26.3
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 2.4e-06 56.2 52 53.8
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 3.2e-06 55.8 126 27.0
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 4.2e-06 55.5 120 28.3
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 4.2e-06 55.5 131 26.0
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 5.5e-06 55.1 80 33.8
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 5.5e-06 55.1 150 28.7
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 7.1e-06 54.7 126 27.8


User provided reference genes

Program Settings